mRNA_P-wetherbeei_contig12606.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12606.1.1
Unique NamemRNA_P-wetherbeei_contig12606.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12606.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12606contigP-wetherbeei_contig12606:416..1854 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1441
Hectar predicted targeting categoryother localisation
Exons1
Ec32 ortholog descriptionTousled-like protein kinase
Ec32 orthologEc-14_000740.2
Cds size1281
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185954.5461957-UTR-P-wetherbeei_contig12606:415..5731683185954.5461957-UTR-P-wetherbeei_contig12606:415..573Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12606 416..573 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185954.555682-CDS-P-wetherbeei_contig12606:573..18541683185954.555682-CDS-P-wetherbeei_contig12606:573..1854Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12606 574..1854 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12606.1.1prot_P-wetherbeei_contig12606.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12606 574..1854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12606.1.1

>prot_P-wetherbeei_contig12606.1.1 ID=prot_P-wetherbeei_contig12606.1.1|Name=mRNA_P-wetherbeei_contig12606.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=427bp
MVIVEENFPPGIRAGGEKVLRKLSLLEARMVGEASNSLEPSMLAGGNGDS
SNDGNSTIGFSNVPAAEPEVAIVEGSKSGSRKRVVEDVSCTPQQDQLEYQ
QPQRLRRRLSSTSTSAAAAGDQSSENGGAKRARSGAGGDPNDGGGAVAAA
PSAPGMALRQLSGIPSDADGSPAPAPAAKPKTIQAYFPRPIPHPPNGAGD
SNGDHPELSLPAATNGDFSPPASGQQQQQPLSRQRRQRSTGVAAVAGGSS
SSRKSSQSAQAVVPPSANAATAAAPGEAEVLRRELERVRVEAIALRTDAE
RAGKERRDLEAMASAVQAQLRKRDDEVASLTRDAEARQKAVASVLETNLR
RAALAEARDRRDALQREATQLGRVVLARSRGGMGLSDTWEDGEAARELQE
RSEELVRRKAELEARKKAAAKASRAVA
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mRNA from alignment at P-wetherbeei_contig12606:416..1854+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12606.1.1 ID=mRNA_P-wetherbeei_contig12606.1.1|Name=mRNA_P-wetherbeei_contig12606.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1439bp|location=Sequence derived from alignment at P-wetherbeei_contig12606:416..1854+ (Phaeothamnion wetherbeei SAG_119_79)
AACGGGTACTGCAGATTGAAACTCACTTCTTTCCGTGAGCATCCGCCTTG
TCTAGCGTCACAGGCCGCTCTGACTTTCTTCGTTCTTCCAGCTCTCCTCA
ATCTTCGAGGTTCAAAATTGGCGAGTGTCTGGACTATTCTCACAAGACGA
GCCAAACCATGGTGATCGTGGAGGAAAATTTTCCACCCGGCATTCGAGCT
GGAGGCGAGAAAGTGCTGCGCAAGCTCTCGCTCCTAGAGGCGCGAATGGT
CGGCGAGGCTTCGAATTCGCTCGAACCAAGCATGCTGGCGGGCGGCAACG
GCGACAGCAGCAACGATGGCAATTCTACGATTGGCTTCAGCAACGTTCCC
GCGGCGGAGCCTGAAGTTGCCATTGTCGAGGGCTCCAAGTCGGGCAGCCG
GAAACGCGTTGTGGAAGACGTGTCGTGTACGCCTCAGCAGGATCAATTAG
AGTACCAGCAGCCGCAGCGGCTGCGGCGGCGACTGAGTTCTACCTCCACG
TCAGCGGCGGCAGCCGGGGACCAATCATCCGAGAACGGCGGCGCGAAACG
AGCTCGTTCTGGGGCCGGCGGTGACCCGAATGATGGCGGCGGTGCTGTCG
CTGCTGCACCATCGGCGCCGGGCATGGCACTACGGCAGCTGTCCGGCATC
CCATCCGACGCCGACGGCAGCCCGGCGCCAGCTCCTGCTGCGAAACCAAA
AACAATTCAGGCGTACTTTCCACGGCCAATACCACACCCCCCCAATGGGG
CTGGCGACAGCAATGGCGACCATCCGGAACTGTCATTACCCGCGGCGACG
AACGGCGATTTCTCCCCACCGGCGTCAGGGCAGCAGCAGCAGCAGCCGCT
GTCTAGGCAACGGCGGCAGCGGAGTACTGGCGTGGCCGCCGTGGCAGGTG
GCAGCAGCAGCAGTCGGAAGAGCAGCCAATCCGCGCAGGCGGTCGTCCCG
CCTTCTGCTAACGCCGCCACCGCCGCCGCCCCCGGTGAGGCCGAGGTGCT
GCGGCGGGAGCTGGAGCGTGTGCGGGTGGAGGCCATCGCGCTGCGCACAG
ACGCGGAGCGCGCTGGCAAGGAGCGGCGCGACCTTGAGGCGATGGCGTCA
GCGGTACAGGCGCAGCTGCGGAAGCGGGATGACGAGGTGGCGTCCCTGAC
GCGCGACGCGGAGGCGCGGCAGAAGGCCGTCGCCAGTGTCCTCGAGACAA
ACCTCCGGCGTGCAGCGCTCGCCGAGGCGCGCGACCGCCGCGACGCGCTC
CAGCGAGAGGCGACGCAGCTCGGGCGAGTCGTGTTGGCGCGCTCCCGCGG
CGGCATGGGGCTCTCCGACACGTGGGAAGATGGCGAGGCAGCGCGGGAGC
TGCAGGAGCGCTCGGAGGAGCTGGTGCGCCGCAAGGCGGAGCTGGAGGCG
CGAAAGAAGGCGGCGGCCAAGGCGTCCCGGGCCGTCGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12606:416..1854+

>mRNA_P-wetherbeei_contig12606.1.1 ID=mRNA_P-wetherbeei_contig12606.1.1|Name=mRNA_P-wetherbeei_contig12606.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1281bp|location=Sequence derived from alignment at P-wetherbeei_contig12606:416..1854+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGATCGTGGAGGAAAATTTTCCACCCGGCATTCGAGCTGGAGGCGA
GAAAGTGCTGCGCAAGCTCTCGCTCCTAGAGGCGCGAATGGTCGGCGAGG
CTTCGAATTCGCTCGAACCAAGCATGCTGGCGGGCGGCAACGGCGACAGC
AGCAACGATGGCAATTCTACGATTGGCTTCAGCAACGTTCCCGCGGCGGA
GCCTGAAGTTGCCATTGTCGAGGGCTCCAAGTCGGGCAGCCGGAAACGCG
TTGTGGAAGACGTGTCGTGTACGCCTCAGCAGGATCAATTAGAGTACCAG
CAGCCGCAGCGGCTGCGGCGGCGACTGAGTTCTACCTCCACGTCAGCGGC
GGCAGCCGGGGACCAATCATCCGAGAACGGCGGCGCGAAACGAGCTCGTT
CTGGGGCCGGCGGTGACCCGAATGATGGCGGCGGTGCTGTCGCTGCTGCA
CCATCGGCGCCGGGCATGGCACTACGGCAGCTGTCCGGCATCCCATCCGA
CGCCGACGGCAGCCCGGCGCCAGCTCCTGCTGCGAAACCAAAAACAATTC
AGGCGTACTTTCCACGGCCAATACCACACCCCCCCAATGGGGCTGGCGAC
AGCAATGGCGACCATCCGGAACTGTCATTACCCGCGGCGACGAACGGCGA
TTTCTCCCCACCGGCGTCAGGGCAGCAGCAGCAGCAGCCGCTGTCTAGGC
AACGGCGGCAGCGGAGTACTGGCGTGGCCGCCGTGGCAGGTGGCAGCAGC
AGCAGTCGGAAGAGCAGCCAATCCGCGCAGGCGGTCGTCCCGCCTTCTGC
TAACGCCGCCACCGCCGCCGCCCCCGGTGAGGCCGAGGTGCTGCGGCGGG
AGCTGGAGCGTGTGCGGGTGGAGGCCATCGCGCTGCGCACAGACGCGGAG
CGCGCTGGCAAGGAGCGGCGCGACCTTGAGGCGATGGCGTCAGCGGTACA
GGCGCAGCTGCGGAAGCGGGATGACGAGGTGGCGTCCCTGACGCGCGACG
CGGAGGCGCGGCAGAAGGCCGTCGCCAGTGTCCTCGAGACAAACCTCCGG
CGTGCAGCGCTCGCCGAGGCGCGCGACCGCCGCGACGCGCTCCAGCGAGA
GGCGACGCAGCTCGGGCGAGTCGTGTTGGCGCGCTCCCGCGGCGGCATGG
GGCTCTCCGACACGTGGGAAGATGGCGAGGCAGCGCGGGAGCTGCAGGAG
CGCTCGGAGGAGCTGGTGCGCCGCAAGGCGGAGCTGGAGGCGCGAAAGAA
GGCGGCGGCCAAGGCGTCCCGGGCCGTCGCG
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