mRNA_P-wetherbeei_contig12585.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: D7G5K8_ECTSI (Scaper protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K8_ECTSI) HSP 1 Score: 163 bits (412), Expect = 1.650e-41 Identity = 104/185 (56.22%), Postives = 136/185 (73.51%), Query Frame = 1 Query: 79 RYLHRKFSSPDRKRR---LSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVERKIESGRERRLQHLTGIAARQKLRRKERVAQMTERRFELEKAASGRWAQLQQRLE 624 R L +K SSP RK + LS AEA+ R +RRQ A LNRAQLA G+ KL+ +RA+ V R+ ++L + E E + +++ ADARR HR+GIVRKA+D N KV+EVLF+NKLTVEDLKITLQM+L EV+R+I+SGR RR Q L GI+ RQ+ R +++ AQM+ERR E E AA+ RW LQ+RLE Sbjct: 1153 RELQKKLSSPQRKPQRKILSAAEAKLRQERRQMVAELNRAQLASGITEKLKQHEERARGVRFRKEEQLLKAEEEAKRKMEGADARRKEHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLLAGISDRQRKRTRDKAAQMSERRLEAESAAAMRWEALQKRLE 1337
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A6H5J638_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J638_9PHAE) HSP 1 Score: 133 bits (334), Expect = 3.690e-31 Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 1 Query: 172 AALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVERKIESGRERRLQHLTGIAARQKLRRKERVAQMTERRFELEKAASGRWAQLQQRLE 624 A LNRAQLA G+ KL+ +RA+ V R+ ++L + E E + +++ ADARR HR+GIVRKA+D N KV+EVLF+NKLTVEDLKITLQM+L EV+R+I+SGR RR Q L GI+ RQ+ R +++ AQM+ERR E E AA+ R Q ++R E Sbjct: 84 AELNRAQLASGVTEKLKQHEERARGVRFRKEEQLLKAEEEAKRKMEGADARRKEHRRGIVRKANDANSKVEEVLFMNKLTVEDLKITLQMKLAEVDRRIQSGRARRQQLLAGISDRQRKRTRDKAAQMSERRLEAESAAN-RHTQARERRE 233
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A7S2WA51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WA51_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 5.400e-17 Identity = 60/134 (44.78%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 61 DVLQPRRYLHRKFSSPDRKRRLSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVER 462 DVL R +H K SSPDRKR LSPAEA+R+ + R AA NR ++ + +L+ +++A++V RQ Q+ A + +L ++ R H Q I RKA++EN KV+EV+FIN LT + ++ TLQ RL EVER Sbjct: 384 DVLLMGRAMHHKLSSPDRKR-LSPAEAKRKQEERHETAARNRDRIEEERQRRLEQAAEKARQVKVRQGQKRASAGGKLALKLSASETRHAQHIQAIARKAANENSKVEEVIFINGLTADAVRATLQQRLVEVER 516
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A7S2WB00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB00_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 6.570e-17 Identity = 60/134 (44.78%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 61 DVLQPRRYLHRKFSSPDRKRRLSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVER 462 DVL R +H K SSPDRKR LSPAEA+R+ + R AA NR ++ + +L+ +++A++V RQ Q+ A + +L ++ R H Q I RKA++EN KV+EV+FIN LT + ++ TLQ RL EVER Sbjct: 537 DVLLMGRAMHHKLSSPDRKR-LSPAEAKRKQEERHETAARNRDRIEEERQRRLEQAAEKARQVKVRQGQKRASAGGKLALKLSASETRHAQHIQAIARKAANENSKVEEVIFINGLTADAVRATLQQRLVEVER 669
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A835ZAD3_9STRA (SCAPER_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD3_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.510e-10 Identity = 62/169 (36.69%), Postives = 74/169 (43.79%), Query Frame = 1 Query: 325 RVAHRQGIVRKASDENHKVDEV--------------------------------------LFINKLTVEDLKITLQMRLNEVERKIESGRERRLQHLTGIAARQ-----------------------------------KLRRKERVAQMTERRFELEKAASGRWAQLQ 612 R A +VRKA+DEN KV EV LF+NKLTVEDLKITLQMRL+EVER+I GR RR HL GIAARQ + R +E MTER+ E++KAA+ RW +LQ Sbjct: 770 RTARSTSVVRKANDENGKVYEVSATHRSVEVDVGVAYHHHLPVSXXXXXXXXXXXXXXXXLFMNKLTVEDLKITLQMRLHEVERRIMGGRMRRQHHLVGIAARQVVTLLLCLMMCXXXXXXXXXXXXXXXXXXXXXXXQRTRAREMALSMTERQSEMDKAAAERWQRLQ 938
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A8B7Z8R4_ACAPL (S phase cyclin A-associated protein in the endoplasmic reticulum-like isoform X1 n=4 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z8R4_ACAPL) HSP 1 Score: 65.9 bits (159), Expect = 2.690e-8 Identity = 55/178 (30.90%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 82 YLHRKFSSPDRKRRLSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVERKIESGRERRLQHLTGIAARQKLRRKERVAQMTERRFELEKAASGRWAQLQQ 615 ++H K SSP RKR + AEAQ+RH+ RQ A R L +KL++ +R +EV E + + L +++E +++ +A+ +R + + RKA +E HK +E+ FIN L ++ + + R G E RLQ L R+++ + + + ERR LE+ R ++Q+ Sbjct: 728 HMHEKLSSPSRKR--TRAEAQKRHEERQAKAQQKRVTLMDEKAIKLKMLHERIEEVREWKEELLMLKKKEMEEKQLRAEQKRQMQLEAVRRKAQEEEHKANEIAFINSLEAQNKRHDILAR--------HQGHEARLQDLMEERQRRQVEKAAKEEAVQERRKALEEERMARLKEMQK 895
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A6F8ZS39_9TELE (C2H2-type domain-containing protein (Fragment) n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F8ZS39_9TELE) HSP 1 Score: 61.6 bits (148), Expect = 5.380e-7 Identity = 45/128 (35.16%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 82 YLHRKFSSPDRKRRLSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVERK 465 ++H K SSP RKR + AE++++H+ +Q A R +L KLQ +R KEV + + + L +R R +++L A+ +R Q IV+KA +E+ KV+E+ FIN L ++ + + +LNE E++ Sbjct: 218 HMHEKLSSPSRKRTI--AESKKKHEEKQLKAQQLREKLRDEKTHKLQKLLEREKEVRKWKEELLDQRRRMMEEKLLHAEFKRELQLQAIVKKAQEEDAKVNEIAFINTLEAQNKRHDVLAKLNEYEQR 343
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A8C7KYV7_ONCKI (S phase cyclin A-associated protein in the endoplasmic reticulum-like n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7KYV7_ONCKI) HSP 1 Score: 61.2 bits (147), Expect = 7.010e-7 Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 82 YLHRKFSSPDRKRRLSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVERK 465 ++H K SSP RKR + AE++++H+ +Q A R +L KLQ +R KEV + + + L +R R +++L A+ +R Q IV+KA +E KV+E+ FIN L ++ + + +LNE E++ Sbjct: 307 HMHEKLSSPSRKRTI--AESKKKHEEKQLKAQQLREKLRDEKTHKLQKLLEREKEVRKWKEELLDQRRRMMEEKLLHAEFKRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLAKLNEYEQR 432
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A6Q2XJM5_ESOLU (S-phase cyclin A associated protein in the ER n=1 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2XJM5_ESOLU) HSP 1 Score: 61.2 bits (147), Expect = 7.120e-7 Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 82 YLHRKFSSPDRKRRLSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVERK 465 ++H K SSP RKR + AE++++H+ +Q A R +L KLQ +R KEV + + + L +R R +++L A+ +R Q IV+KA +E KV+E+ FIN L ++ + + +LNE E++ Sbjct: 339 HMHEKLSSPSRKRTI--AESKKKHEEKQLKAQQLRDKLRDEKTHKLQKLLEREKEVRKWKEELLDQRRRMMEEKLVHAEFKRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLAKLNEYEQR 464
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Match: A0A8C8LWG2_ONCTS (S-phase cyclin A-associated protein in the ER n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8LWG2_ONCTS) HSP 1 Score: 61.2 bits (147), Expect = 8.610e-7 Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 82 YLHRKFSSPDRKRRLSPAEAQRRHDRRQRAAALNRAQLAGGLRLKLQLQSDRAKEVGERQAQRLAEREREFQDRLDQADARRVAHRQGIVRKASDENHKVDEVLFINKLTVEDLKITLQMRLNEVERK 465 ++H K SSP RKR + AE++++H+ +Q A R +L KLQ +R KEV + + + L +R R +++L A+ +R Q IV+KA +E KV+E+ FIN L ++ + + +LNE E++ Sbjct: 420 HMHEKLSSPSRKRTI--AESKKKHEEKQLKAQQLREKLRDEKTHKLQKLLEREKEVRKWKEELLDQRRRMMEEKLLHAEFKRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLAKLNEYEQR 545 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12585.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12585.1.2 >prot_P-wetherbeei_contig12585.1.2 ID=prot_P-wetherbeei_contig12585.1.2|Name=mRNA_P-wetherbeei_contig12585.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=292bp GGGSTGSDRGGRGGGSAGAGDVLQPRRYLHRKFSSPDRKRRLSPAEAQRRback to top mRNA from alignment at P-wetherbeei_contig12585:2..1819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12585.1.2 ID=mRNA_P-wetherbeei_contig12585.1.2|Name=mRNA_P-wetherbeei_contig12585.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1818bp|location=Sequence derived from alignment at P-wetherbeei_contig12585:2..1819- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12585:2..1819- >mRNA_P-wetherbeei_contig12585.1.2 ID=mRNA_P-wetherbeei_contig12585.1.2|Name=mRNA_P-wetherbeei_contig12585.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig12585:2..1819- (Phaeothamnion wetherbeei SAG_119_79)back to top |