mRNA_P-wetherbeei_contig1255.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A7S3Y839_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y839_HETAK) HSP 1 Score: 185 bits (469), Expect = 1.640e-50 Identity = 111/166 (66.87%), Postives = 128/166 (77.11%), Query Frame = 3 Query: 237 QVRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLYR 734 QV ++TGDN A A+A RVGI A V AGVLPAQKA +I +LQ G VAMVGDG+NDSPALA ADVGIAIGAG QVAVEAAAMVLVRS+L+DV AL LSR VFNRIRLNF WAMGYN+L +P+AAG L+P + + P+ AA MA SS VV SSL L+LY+ Sbjct: 29 QVWLVTGDNPRTAAALARRVGIPEAFVRAGVLPAQKADQIRQLQGAGHTVAMVGDGINDSPALAQADVGIAIGAGAQVAVEAAAMVLVRSHLHDVYTALHLSRTVFNRIRLNFIWAMGYNVLMIPMAAGALIPVIHTTVPPQMAALAMAFSSVTVVMSSLLLRLYQ 194
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI) HSP 1 Score: 196 bits (497), Expect = 3.620e-50 Identity = 118/164 (71.95%), Postives = 132/164 (80.49%), Query Frame = 3 Query: 240 VRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLY 731 V ++TGDN+ A AVAA VGI V AGVLPA K+RK+ ELQ G VAMVGDGVNDSPALA ADVGIA+GAGTQVAVEAA MVLVRS+L DVVV+L LSRAVF RIR+NF WA+ YN++ALPLAAGLL P LGLG+TP AA MA SS+LVV SSL LKLY Sbjct: 1140 VWVVTGDNRATAEAVAAIVGIPRGKVMAGVLPADKSRKVQELQRMGQAVAMVGDGVNDSPALAMADVGIAVGAGTQVAVEAADMVLVRSDLRDVVVSLHLSRAVFRRIRMNFVWALSYNVVALPLAAGLLKPWLGLGVTPALAALFMASSSSLVVLSSLGLKLY 1303
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A7S2NB68_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NB68_9EUKA) HSP 1 Score: 168 bits (425), Expect = 3.550e-45 Identity = 103/169 (60.95%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 228 RTNQVRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLYR 734 R QV M++GDN+ + AA VGI HVAAGVLPAQKA K+ ELQ RG VVAMVGDGVND+PAL ADVGIA+G+GT +A+ AA MVL+RS+LN V ALDLSRAV RIRLNF WA GYN++ +P AAG+ P L + P +AA MA SS VV SSL L Y+ Sbjct: 54 RRLQVWMVSGDNERSVRHTAALVGIDPEHVAAGVLPAQKAVKVRELQGRGQVVAMVGDGVNDAPALTQADVGIAVGSGTDIALAAADMVLMRSDLNGVETALDLSRAVMRRIRLNFIWAFGYNVVGIPFAAGVFYPGARLHMPPMYAAIAMAGSSICVVCSSLLLWCYK 222
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A836CM51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM51_9STRA) HSP 1 Score: 177 bits (449), Expect = 6.530e-44 Identity = 116/167 (69.46%), Postives = 127/167 (76.05%), Query Frame = 3 Query: 237 QVRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGD-VVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLYR 734 +V ++TGDN A AVA RVGI V A +LPA KAR++ +LQ VVAMVGDGVNDSPALAAADVGIAIGAG QVAVEAA MVLVR++L V ALDLSRAV RIRLNF WA+GYN ALPLAAG L+P LGL LTP AAA MA SS LVV SSLAL LYR Sbjct: 1081 RVWLMTGDNARTAEAVARRVGIPPECVLAELLPAHKARRVQQLQRETRAVVAMVGDGVNDSPALAAADVGIAIGAGAQVAVEAADMVLVRADLLAVGTALDLSRAVLARIRLNFAWALGYNAAALPLAAGALLPPLGLSLTPPLAAAFMASSSMLVVLSSLALNLYR 1247
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A7S0JW25_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JW25_CAFRO) HSP 1 Score: 169 bits (429), Expect = 1.140e-43 Identity = 103/164 (62.80%), Postives = 126/164 (76.83%), Query Frame = 3 Query: 240 VRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLY 731 VR+LTGDN+ AALAVA +G+A V AGVLP+ K +A LQARG VAMVGDG+ND+PALA A VG+AIGAGTQVA++AA +VLVRS L D+V A+DLSR F RI +N+ +++GYN L +P+AAG L PAL + L PE AA MALSS VV SSLAL+LY Sbjct: 116 VRILTGDNRRAALAVARELGVAPECVDAGVLPSGKIDAVAALQARGRTVAMVGDGINDAPALAKATVGVAIGAGTQVAMDAADVVLVRSELADIVTAVDLSRVTFRRIWINYAFSLGYNALGVPVAAGALYPALRVALPPEVAALTMALSSVCVVLSSLALRLY 279
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A7C8YE64_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YE64_OPUST) HSP 1 Score: 164 bits (414), Expect = 1.280e-43 Identity = 101/163 (61.96%), Postives = 119/163 (73.01%), Query Frame = 3 Query: 246 MLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLYR 734 M+TGDN G A A+A VGI V A P KA KI E+Q RG VAMVGDG+NDSPALAAADVG+AIGAGT VA+EAA +VL++SNL DVV A+DLSR +RIRLN+ WA+GYN+LA+P+AAG L P G+ L P A A MA SS VV SSL L+ YR Sbjct: 69 MVTGDNWGTATAIAKEVGIG--EVYAETDPIGKADKIKEIQMRGLTVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAADIVLIKSNLEDVVTAIDLSRKTMSRIRLNYVWALGYNVLAMPIAAGALFPFAGIRLPPWVAGACMAASSISVVCSSLLLQYYR 229
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A7S2RRQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRQ9_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.560e-43 Identity = 108/166 (65.06%), Postives = 127/166 (76.51%), Query Frame = 3 Query: 237 QVRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGD-VVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLY 731 +V ++TGDN A AVAA++GI G V AGVLP KA K+ LQ G VVAMVGDGVNDSPALA ADVGIA+GAGTQ+AVEAA++VLV++ L DV ALDLSR VF RI++NFFWA+ YNL+ +P+AAGLL+P L L L P A MALSS VVASSL LKLY Sbjct: 690 EVWLVTGDNDRTARAVAAQLGIPGPRVLAGVLPGDKAAKVEALQDGGRRVVAMVGDGVNDSPALARADVGIAVGAGTQIAVEAASIVLVKNKLVDVFTALDLSRTVFRRIKINFFWAIAYNLVLIPVAAGLLVPWLNLRLHPAAAGLAMALSSVSVVASSLTLKLY 855
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A225UJF8_9STRA (Copper-transporting ATPase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UJF8_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.540e-43 Identity = 95/165 (57.58%), Postives = 125/165 (75.76%), Query Frame = 3 Query: 237 QVRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLY 731 +V M+TGDN A ++A ++G+ +V A VLP++K+ K+ ELQ G +V MVGDG+NDSPALA A++GIAIG GT++AVE A MVL++SNL DV+ AL LSR +FNRIRLN+ WA GYN L +PLAAG+L P + + P FA+A MALSS VV SSLAL++Y Sbjct: 67 EVWMVTGDNTRTAFSIAEQLGMNRLNVMADVLPSEKSSKVKELQDTGRIVGMVGDGINDSPALAQANLGIAIGGGTKIAVETAGMVLMKSNLFDVITALHLSRTIFNRIRLNYVWAFGYNCLLVPLAAGVLYP-VNFSIPPMFASAAMALSSVSVVLSSLALRIY 230
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A836CEY3_9STRA (Putative copper-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY3_9STRA) HSP 1 Score: 174 bits (442), Expect = 5.080e-43 Identity = 106/182 (58.24%), Postives = 127/182 (69.78%), Query Frame = 3 Query: 189 GCSTFLLLLYRDCRTNQVRMLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLYR 734 ST L + + V M+TGDN A ++ +GI + A VLPA KARK+ ELQ+ G+VVAMVGDG+NDSPALAAADVGIAIGAGTQVA+EAA MVLVR+NL+DVVVAL LS+ VF RIR NF WAM YNL +P AAG+L P + L FA M +SS VV SSL+L+ YR Sbjct: 959 AASTVAALQHMGLKAIHVWMVTGDNSRTARSLGRNLGIPAERIVAEVLPAHKARKVRELQSMGEVVAMVGDGINDSPALAAADVGIAIGAGTQVAIEAAQMVLVRNNLHDVVVALHLSKRVFRRIRANFMWAMLYNLCGIPFAAGVLFPFVHHQLPTAFAGLSMTMSSVSVVLSSLSLRFYR 1140
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Match: A0A5D2BR02_GOSDA (Uncharacterized protein n=1 Tax=Gossypium darwinii TaxID=34276 RepID=A0A5D2BR02_GOSDA) HSP 1 Score: 162 bits (410), Expect = 5.610e-43 Identity = 95/162 (58.64%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 246 MLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVGDGVNDSPALAAADVGIAIGAGTQVAVEAAAMVLVRSNLNDVVVALDLSRAVFNRIRLNFFWAMGYNLLALPLAAGLLMPALGLGLTPEFAAAMMALSSTLVVASSLALKLY 731 M+TGDN G A ++A+++GI V A P QKA K+ ELQA G VAMVGDG+NDSPAL AADVG+AIGAGT +A+EAA +VL++SNL DV+ A+ LSR F+RIRLN+ WA+GYN+L +P+AAG L P+ G L P A A MA SS VV SL LK Y Sbjct: 65 MVTGDNWGTASSIASQIGIE--TVVAEAKPEQKAEKVKELQAEGYAVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLIKSNLEDVITAIHLSRKTFSRIRLNYIWALGYNILGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKNY 224 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1255.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1255.4.1 >prot_P-wetherbeei_contig1255.4.1 ID=prot_P-wetherbeei_contig1255.4.1|Name=mRNA_P-wetherbeei_contig1255.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp MLTGDNKGAALAVAARVGIAGAHVAAGVLPAQKARKIAELQARGDVVAMVback to top mRNA from alignment at P-wetherbeei_contig1255:5710..7425- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1255.4.1 ID=mRNA_P-wetherbeei_contig1255.4.1|Name=mRNA_P-wetherbeei_contig1255.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1716bp|location=Sequence derived from alignment at P-wetherbeei_contig1255:5710..7425- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1255:5710..7425- >mRNA_P-wetherbeei_contig1255.4.1 ID=mRNA_P-wetherbeei_contig1255.4.1|Name=mRNA_P-wetherbeei_contig1255.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig1255:5710..7425- (Phaeothamnion wetherbeei SAG_119_79)back to top |