mRNA_P-wetherbeei_contig1255.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1255.2.1
Unique NamemRNA_P-wetherbeei_contig1255.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S4ASN5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ASN5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 5.300e-23
Identity = 134/504 (26.59%), Postives = 196/504 (38.89%), Query Frame = 1
Query:  322 VQESETVWNTLNPTWRRQLLFF-PVDVPEACIG--PGDVCGSNYSTGGGSAARXXXXXTAAAA-----------KPGNVLKQVTPSRHHL--NLQVQVLHRRDPAASSGASPPHDKLGDAAAPLLGEAQLDFTDLLAGRVDRIDVWVALEPGRDASNGGGG----SSGVSGGGSGCGEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADKEVFTVEDLCDHDGVIV-SYTSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAASPAAAVATEAFHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAAGFADVAARLLP-GSSGGGVSGGDGAPAVAGPVGAVDAEGPHATPRLASAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVTCPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
             Q +  V++TL+P W R  +FF  V +P + +   P  +     +T  G+   XXX     A            KP N    V      L  NL    LH     +           GD+    LG A +D T L  G+V  +D WV L      +N G      SS           +R+  +++ A  +PR GD    +++ HP D +PL   +  + V+ + ++  V++ SY S EGW    + HR + +  E+    TL  A        + ++ASP  A  TE   +VV DG  G+   A     G+  +  RW +GG+     D+          ++++  G S                   +D E P      +S  +L+       D    P                                             P  CPITG P+ DPVVAADGH+YERSAI RWL+  + SPMTG  L  K L  NY LL+
Sbjct:  149 TQRTSDVYSTLDPAWPRDEVFFMDVSLPASQLTHEPTQLSDEVAATSAGAXXXXXXGTVQDAPELLQDPFHGYKKPDNTTLTVAIFHSELENNLGKNKLHNEGCLS-----------GDSDDTFLGMASVDLTALFTGKVSEMDEWVPLNGTTSDTNSGRNLDYHSSKRQASRGASASVRIVCEYELADVSPRPGDICRFLKICHPKDLYPLEPSRS-YKVDQVHNNGAVVILSYESQEGWLLSFQAHRNMLICEERCVS-TLNKAQVELQTLGERLSASPLIAAVTETAGKVVDDGLVGI---AEGIVEGSAFVFDRWFKGGVGTIIQDLQDITNIDGRHSQVVNIGQS-------------------LDVESP-----ASSTCSLVGENNEGTDESMTP-----------------------------YAYQEKEAEGEALPNMP-QCPITGFPMLDPVVAADGHTYERSAIARWLKTSEKSPMTGSVLFHKELVPNYGLLS 582          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A448YZM3_9STRA (U-box domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZM3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 8.940e-23
Identity = 135/501 (26.95%), Postives = 184/501 (36.73%), Query Frame = 1
Query:  322 VQESETVWNTLNPTWRRQLLFFPVDVPEACIGPGDVCGSNYSTGGGSAARXXXXXTAAAAKPGNVLKQVTPSRHHLNLQVQVLHRRDPAASSGASPPHDKLG-------DAAAPLLGEAQLDFTDLLAGRVDRIDVWVALEPGRD------------ASNGGGGSSGVSGGGSGCGEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADKEVFTVEDLCDHDGVIVSYTSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAASPAAAVATEAFHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAAGFADVAARLLPGSSGGGVSGGDGAPAVAGPVGAVDAEGPHATPRLASAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVTCPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
             Q +  +++TL+P W R  +FF +DV            +  S+       XX    A  A          P   +  L V + H    + + G     DKLG       D+    LG A +D   L  G V  +D WV L                 +SN    + G +        +R+  +++ +   P+ GD     +  HP D +PL   +         +   VI+SY SPEGW    + HR +    E+     L  A        + +A SP  A  TE   RV+ DG  G+   AGE  +G+  +  RW RGG+     D+       DV    L G                      DA G      L S+A+L D    + DGV                                                P  CPITG P+ DPVVAADGH+YER AI RWL   D SPMTG  L  K L  NY LL+
Sbjct:  132 TQRTSELYSTLDPVWPRDEVFF-MDVSLPVSQLTHSAETPLSSXXXXXXXXXHEDAAPEALDDPFYSYQKPD--NTALTVAIFHSESGSNNLGKHKHKDKLGEGGTVSGDSDDAFLGMASIDLAALFTGMVPELDEWVPLHGTASDHHHVGHQEHYRSSNRHRTTRGAA--------VRIVCEYEPSDAPPKPGDICRFTKFCHPRDLYPLEPSRSYKVDTVRGNGTAVILSYESPEGWLLSFQAHRNMLFTEER-HVSPLNTAQDELQTLGERLAVSPLIAAVTETAERVLDDGLVGI---AGEIVKGSAFVFDRWFRGGVDTVIRDLR------DV--TNLDGRHN------------------QDAIGESLEIGLGSSASLDD---ASDDGV--------------------DNAESCAEHEPAALDPIEEQQGEALPNMP-PCPITGFPMVDPVVAADGHTYERRAIRRWLGTSDKSPMTGSVLLHKELVPNYGLLS 567          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S1ZGT9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZGT9_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.470e-21
Identity = 106/383 (27.68%), Postives = 157/383 (40.99%), Query Frame = 1
Query:  646 LGEAQLDFTDLLAGRVDRIDVWVALEPGRDASNGGGGSSGVSGGGSGCGEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADKEVFTVEDLCDHDGVIVSY-TSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAASPAAAVATEAFHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAAGFADVAARLLPGSSGGGVSGGDGAPAVAGPVGAVDAEGPHATPRLA-----SAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVT---CPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
            LG   ++   LL G+V  ID W  L      S+    S  +       GE+RL  +++     PR GD   +     P D +P+ A   +F V+++ D D +I+SY T  EGW C   VHRF  +  ++ +   ++   +  VD  + +  SP   V  E     + +  DGV+ +  +   G   +  RW +GG+  A  DV+    +                                  +G H TPRL      +    ++N G++ D       A Y  D                                       T   CPITG P++DPVVAADGH+YER AI RWL+  D SP+TG+TL+ K L  NY LL+
Sbjct:  248 LGFTSINIRHLLTGKVTIIDEWFPLSDNGTNSDDXXXSDDIYS--YSAGEVRLLCEYEPTDPPPRTGDLCRITGFCCPTDLYPVPAHL-LFRVDEM-DGDDIILSYKTEEEGWHCTFVVHRFSVICAKRHQA-AIERYREGLVDAANKLVHSPLVKVVAETVKERMPE--DGVLFVGADIVLGGFGLIGRWAKGGIGTALDDVVNVTNW----------------------------------DGRH-TPRLLDNDDENVQIEINNAGMS-DEENEEDTADYRADIYQDELDGLQDMNNGNAMEELSSSTTTSLSSLTAVATTTTLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLS 587          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S4UT27_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UT27_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.630e-21
Identity = 106/383 (27.68%), Postives = 157/383 (40.99%), Query Frame = 1
Query:  646 LGEAQLDFTDLLAGRVDRIDVWVALEPGRDASNGGGGSSGVSGGGSGCGEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADKEVFTVEDLCDHDGVIVSY-TSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAASPAAAVATEAFHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAAGFADVAARLLPGSSGGGVSGGDGAPAVAGPVGAVDAEGPHATPRLA-----SAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVT---CPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
            LG   ++   LL G+V  ID W  L      S+    S  +       GE+RL  +++     PR GD   +     P D +P+ A   +F V+++ D D +I+SY T  EGW C   VHRF  +  ++ +   ++   +  VD  + +  SP   V  E     + +  DGV+ +  +   G   +  RW +GG+  A  DV+    +                                  +G H TPRL      +    ++N G++ D       A Y  D                                       T   CPITG P++DPVVAADGH+YER AI RWL+  D SP+TG+TL+ K L  NY LL+
Sbjct:  537 LGFTSVNIRHLLTGKVTIIDEWFPLSDNGTNSDDXXXSDDIYS--YSAGEVRLLCEYEPTDPPPRTGDLCRITGFCCPTDLYPVPAHL-LFRVDEM-DGDDIILSYKTEEEGWHCTFVVHRFSVICAKRHQA-AIERYREGLVDAANKLVHSPLVKVVAETVKERMPE--DGVLFVGADIVLGGFGLIGRWAKGGIGTALDDVVNVTNW----------------------------------DGRH-TPRLLDNEDENVQIEINNAGMS-DEENEEDTADYRADIYQDELDGLQDMNNGNAMEELSSSTTTSLSSLTAVATTTTLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLS 876          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S4R5G1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R5G1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 7.500e-21
Identity = 106/383 (27.68%), Postives = 157/383 (40.99%), Query Frame = 1
Query:  646 LGEAQLDFTDLLAGRVDRIDVWVALEPGRDASNGGGGSSGVSGGGSGCGEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADKEVFTVEDLCDHDGVIVSY-TSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAASPAAAVATEAFHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAAGFADVAARLLPGSSGGGVSGGDGAPAVAGPVGAVDAEGPHATPRLA-----SAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVT---CPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
            LG   ++   LL G+V  ID W  L      S+    S  +       GE+RL  +++     PR GD   +     P D +P+ A   +F V+++ D D +I+SY T  EGW C   VHRF  +  ++ +   ++   +  VD  + +  SP   V  E     + +  DGV+ +  +   G   +  RW +GG+  A  DV+    +                                  +G H TPRL      +    ++N G++ D       A Y  D                                       T   CPITG P++DPVVAADGH+YER AI RWL+  D SP+TG+TL+ K L  NY LL+
Sbjct:  663 LGFTSVNIRHLLTGKVTIIDEWFPLSDNGTNSDDXXXSDDIYS--YSAGEVRLLCEYEPTDPPPRTGDLCRITGFCCPTDLYPVPAHL-LFRVDEM-DGDDIILSYKTEEEGWHCTFVVHRFSVICAKRHQA-AIERYREGLVDAANKLVHSPLVKVVAETVKERMPE--DGVLFVGADIVLGGFGLIGRWAKGGIGTALDDVVNVTNW----------------------------------DGRH-TPRLLDNEDENVQIEINNAGMS-DEENEEDTADYRADIYQDELDGLQDMNNGNAMEELSSSTTTSLSSLTAVATTTTLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLS 1002          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S2P503_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P503_9STRA)

HSP 1 Score: 107 bits (267), Expect = 7.680e-21
Identity = 93/329 (28.27%), Postives = 139/329 (42.25%), Query Frame = 1
Query:  790 GEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADKEVFTVEDLCDHDGVIVSYTSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAASPAAAVATEAFHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAAGFADVAARLLPGSSGGGVSGGDGAPAVAGPVGAVDAEGPH--ATPRLASAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVTCPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLTR 1770
            GE+R+ ++++    APR GD   L       D +P+ A   VF V+++ D+D VI+SYTSPEGW C   VHR++ V   + +   L++     +  V+  A SP     T+   RV  D   G++ +  +   G + +  RW  GG+  A  D+                                  + A + +G H  A+   +++A   D+  + +D V                                                P  CPITG  + DPVVAADGH+YERSAI RWL+    SP+TG+ L  K L  NYSL+ R
Sbjct:  146 GEVRVVIEYEPTDSAPRPGDMCRLTSFCQLKDVYPIPAH-HVFLVDNVEDNDNVILSYTSPEGWLCTFCVHRYMVVCAVRHQA-ALEIYQDEILSLVNKFAESPMKGALTDVVKRVPDD---GLMDIGIDVALGTQTLLSRWFSGGIDTAMEDL----------------------------------INATNLDGRHSIASFHTSNSATSHDSDSI-VDQV--------------------SLDLPESETLHEVSSHVFDDDKEALPNMPC-CPITGERMRDPVVAADGHTYERSAIARWLQQSGKSPLTGKELPHKELVTNYSLIER 413          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S2UGV6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGV6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 5.230e-20
Identity = 100/382 (26.18%), Postives = 154/382 (40.31%), Query Frame = 1
Query:  640 PLLGEAQLDFTDLLAGRVDRIDVWVALEPGRDASNGGGGSSGVSGGGSGCGEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADKEVFTVEDLC--DHDGVIVSYTSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAA----SPAAAVATEAFHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAAGFADVAARLLPGSSGGGVSGGDGAPAVAGPVGAVDAEGPHATPRLASAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVTCPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
            P+LG   +D T LL G++  ID W+ L           G   V G     G +R+  ++D+    PR GD        +P+D +P+   +  F VE++   D D +I+SYT+PEGW+     HR++ +   +      + A +   D + AVA     SP      +   RV  D   G++ +  +A +    +  RW +GG+  A  D++ A  + D   R  P                       D++          ++ L D             G+  + D                                        CPITG  ++DPVVAADGH+YERSAI RWL+  + SP+TG  L  K L  NY L++
Sbjct:  146 PILGMGSIDLTPLLTGKMTSIDKWLPLS----------GQLDVGGSDRSNGAVRVICEYDSTDPPPRRGDLVRFTGFCNPVDLYPIPVGR-TFLVEEVGPDDPDSIILSYTTPEGWKSSFAAHRYMLICAVRH-----RRALEKYHDEISAVAKRFAHSPLVKGVVQTVDRVPED---GLIYVGADAVKEGVSLLGRWFQGGVGKAVGDIVYATNWDD---RHTPAHENS------------------DSDXXXXXXXXTESSRLND-------------GSEDIDDESKIALPGMPC-----------------------------CPITGESMKDPVVAADGHTYERSAIRRWLQKSNKSPLTGGLLPHKELVPNYVLMS 445          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S1UFM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.570e-18
Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 1
Query: 1591 QPVT---CPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSL 1761
            +PVT   CPITG P+ +PVVAADGH+YERSA+ERWLRDHDTSP+TGE L TKALF N +L
Sbjct:   30 EPVTSAECPITGAPMCEPVVAADGHTYERSAMERWLRDHDTSPLTGEVLPTKALFPNRTL 89          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A7S2V8Y5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V8Y5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.120e-17
Identity = 107/423 (25.30%), Postives = 164/423 (38.77%), Query Frame = 1
Query:  550 NLQVQVLHRRDPAASSGASPPHDKLGDAAAPLLGEAQLDFTDLLAGRVDRIDVWVALEPGRDASNGGGGSSGVSGGGSGCGEIRLAVDFDAAGRAPRIGDTAALVRLGHPLDFFPLRADK-------------EVFTVEDLCDHDGVIVSYTSPEGWRCQAEVHRFLAVPVEKPEPFTLQMAAKAAVDTVDAVAASPAAAVATEA-FHRVVSDGFDGVVALAGEAERGARRIARRWLRGGLSLAAADVMGAA---GFADVAARLLPGSSGGGVSGGDGAPAVAGPVGAVDAEGPHATPRLASAAALLDNGGVAMDGVFGPGGAGYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQPVTCPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
            N +   L+    A  +GA       GD+    LG   +D T L+ G+   +D W  L  G  ++   G     +G  S CG +R+  +++A+   PR GD           D +PL  DK              +++     + D V +SY +PEGW C    HR++ +  E+ +   L+         +  ++ SP      +   HR+  +   G+V +   A +G   + +RW+  G++ A  D+M      G  DV+AR                                   RLA      ++   + +             XXXX                                 P  CPITG P++DPVVAADGH+YER+AI RWL   D SP+TG  L  K L  NY L++
Sbjct:    7 NNKSDALYNPSKAKKNGAG---SGGGDSDDVFLGMTAIDVTTLITGKEQMVDAWCPLTGGSGSTENQGQRKSENGQSS-CGSVRIICEYEASDTRPRSGDIVQFTGYCRSSDLYPLCHDKLYEVAPEPDEEIMNLYSQPGTEEEDYVSLSYKTPEGWMCTYVAHRYMLMIYEERQTGALEHYQDEIGLGLKRLSNSPLVHTLQDVTMHRIPDE---GLVTVGVTALQGVGSLFQRWMEQGVNTAVHDIMHVTNLDGHNDVSARE----------------------------------RLAQ-----EDVTTSENEXXXXXXXXXXXXXXXXTSTSQSVAASANDALNTSSPRKKSPWESLPTNMPF-CPITGEPMQDPVVAADGHTYERAAIARWLATSDKSPLTGSVLPHKNLVPNYMLVS 382          
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.580e-16
Identity = 36/55 (65.45%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 1603 CPITGMPIEDPVVAADGHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLT 1767
            CPIT  P+EDP VAADG++YER+AIERWL +HDTSP+TG+ L TK +F+N+SL++
Sbjct:   45 CPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVS 99          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1255.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4ASN5_9STRA5.300e-2326.59Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448YZM3_9STRA8.940e-2326.95U-box domain-containing protein n=1 Tax=Pseudo-nit... [more]
A0A7S1ZGT9_9STRA2.470e-2127.68Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4UT27_9STRA6.630e-2127.68Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4R5G1_9STRA7.500e-2127.68Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2P503_9STRA7.680e-2128.27Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2UGV6_9STRA5.230e-2026.18Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1UFM5_9STRA3.570e-1873.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2V8Y5_9STRA1.120e-1725.30Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A6H5KDQ7_9PHAE1.580e-1665.45U-box domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1255contigP-wetherbeei_contig1255:1145..3857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog42099.EPrPV00000022746
PFAMsU-box
Model size2360
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.86e-13
EggNOG OGs2CWR7@1|root,2RV1F@2759|Eukaryota,1MFND@121069|Pythiales
Ec32 ortholog descriptionU box domain
Ec32 orthologEc-22_002200.1
DescriptionIsoform 2 of U-box domain-containing protein 57. Source PGD
Cds size723
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185952.5454118-UTR-P-wetherbeei_contig1255:1144..17311683185952.5454118-UTR-P-wetherbeei_contig1255:1144..1731Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1255 1145..1731 -
1683185952.581109-UTR-P-wetherbeei_contig1255:2807..38571683185952.581109-UTR-P-wetherbeei_contig1255:2807..3857Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1255 2808..3857 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185952.5560758-CDS-P-wetherbeei_contig1255:1731..18371683185952.5560758-CDS-P-wetherbeei_contig1255:1731..1837Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1255 1732..1837 -
1683185952.5699742-CDS-P-wetherbeei_contig1255:2190..28071683185952.5699742-CDS-P-wetherbeei_contig1255:2190..2807Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1255 2191..2807 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1255.2.1prot_P-wetherbeei_contig1255.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1255 1732..2807 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1255.2.1

>prot_P-wetherbeei_contig1255.2.1 ID=prot_P-wetherbeei_contig1255.2.1|Name=mRNA_P-wetherbeei_contig1255.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp
MAAKAAVDTVDAVAASPAAAVATEAFHRVVSDGFDGVVALAGEAERGARR
IARRWLRGGLSLAAADVMGAAGFADVAARLLPGSSGGGVSGGDGAPAVAG
PVGAVDAEGPHATPRLASAAALLDNGGVAMDGVFGPGGAGYLGDDDDGGY
TNGGAGGGIAGTEETKDGDGGARRRRREQRQPVTCPITGMPIEDPVVAAD
GHSYERSAIERWLRDHDTSPMTGETLATKALFRNYSLLTR*
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mRNA from alignment at P-wetherbeei_contig1255:1145..3857-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1255.2.1 ID=mRNA_P-wetherbeei_contig1255.2.1|Name=mRNA_P-wetherbeei_contig1255.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2713bp|location=Sequence derived from alignment at P-wetherbeei_contig1255:1145..3857- (Phaeothamnion wetherbeei SAG_119_79)
AGGTCTCAGAGCCGGGACCGATGGAGGCTATTTGCACCACTTGCTCCAGA CAAACACCTCGAATCCCTTTTGCCGCGTCCGCCTTGGGGTAAGTGACATT TTCTTTCGCTCCTCTGAACCAGATCTTTGGGCACCGACATCTTTCTCCAC GGTGAGGTTCCTGCGCCTCGCTGCTCTCGCTCCCGAGGTTTCGTGAAGTT CACTTCGCCCACCCTATTGCTACGCCATTAACCTCGAGACTGGCGATAGA TTTACACATTAGGTCTCTCGCAAACCCTCTACACCAATTCTCCTTCGCCC CTTTCCCCTCCATAGCACAACGTCCAAGAGTCGGAAACCGTCTGGAACAC ACTGAACCCAACGTGGCGACGTCAGCTCCTCTTCTTTCCCGTCGACGTCC CCGAGGCCTGCATCGGCCCCGGCGACGTCTGCGGCAGCAACTACAGCACT GGCGGCGGGTCGGCGGCCCGCGGCGGCACCGCCGCCACCGCTGCCGCCGC CAAGCCCGGCAACGTCCTGAAACAGGTGACGCCGTCGCGGCACCACCTCA ACCTGCAAGTTCAGGTGCTTCACCGGAGGGATCCCGCTGCATCGTCTGGC GCGTCGCCGCCGCATGACAAGCTCGGCGACGCCGCCGCGCCGCTCCTCGG CGAGGCGCAGCTCGACTTCACCGACCTCCTGGCAGGCCGCGTCGACCGCA TCGATGTCTGGGTCGCGCTGGAGCCCGGCCGCGACGCCTCCAACGGCGGC GGCGGCAGCAGCGGCGTCAGCGGCGGCGGCAGCGGCTGCGGCGAGATCCG GCTGGCGGTGGACTTCGACGCGGCGGGGCGGGCACCGCGCATCGGCGACA CGGCCGCGCTGGTGCGGCTGGGCCACCCGCTAGACTTCTTTCCGCTGCGT GCTGACAAAGAAGTCTTCACCGTGGAGGATCTCTGCGACCACGACGGCGT CATCGTCTCCTACACGAGTCCCGAGGGCTGGCGTTGCCAGGCGGAGGTGC ATCGCTTTCTGGCAGTCCCTGTGGAGAAGCCGGAGCCGTTCACGCTTCAG ATGGCAGCCAAGGCGGCCGTTGACACCGTCGACGCGGTGGCGGCGTCGCC GGCGGCGGCGGTGGCGACGGAGGCGTTCCACCGCGTCGTCAGCGACGGCT TCGACGGCGTTGTGGCGCTGGCCGGGGAGGCGGAGCGCGGTGCGCGTCGC ATCGCGCGGCGGTGGCTGCGCGGTGGGCTGTCCCTCGCGGCGGCCGACGT CATGGGGGCGGCGGGCTTCGCGGACGTCGCGGCACGGCTCCTGCCGGGCA GCAGCGGCGGCGGCGTTAGCGGCGGCGACGGGGCGCCAGCAGTTGCCGGG CCGGTGGGCGCGGTGGATGCCGAGGGGCCCCATGCGACGCCGCGGCTGGC GTCGGCGGCGGCGCTCCTCGATAACGGCGGCGTGGCGATGGACGGCGTCT TCGGCCCCGGCGGCGCCGGCTACCTCGGCGACGACGATGACGGTGGCTAC ACCAATGGCGGGGCCGGCGGCGGCATCGCGGGGACAGAGGAAACGAAGGA CGGGGACGGCGGCGCGCGGCGAAGGCGGCGGGAGCAGCGGCAGCCGGTGA CATGCCCAATCACGGGCATGCCCATTGAGGACCCCGTCGTGGCGGCGGAC GGCCACAGCTACGAGCGGTGAGTGCAGTCCGGCGGGCAACTTGCTGGAGC GTGCGTTTTCAATCGCTCGCCCGTCGTTAGGACAAGGCGCCACCGGCATT TTGGTGGTCTTCCAGGGCTGTTTCTTTCATCCTCTGGTTGTAAGATACTG CAGTCTGTCCTGGGGGAAGAATCGAGGGCTCAAAATGGTGGATGAAAAAT GTTTGAAAAGGAACGCTAGAGAAACTTTAGCCTCACGCAGAAAGTTTGTT GGAAGAAACTAGCGATAGCGCCAGACCAAAAGAACGGAGTATCCGAAGCT GTTGCCATACCTTTGTTGACGCCGCATTCCTATTCTCCTCTTCTTTCCCA CCGGCGGTCGGCTGACACAGGTCGGCCATCGAGCGGTGGCTGCGGGACCA TGACACGAGCCCCATGACTGGCGAGACACTCGCCACAAAGGCGCTCTTCC GAAACTACTCCCTCCTCACCCGCTAAGGTAGGCGGGTCTTGCCGGGTGGA GGCGGGGCTACAGCGACGGCGGAGCGGTGGTGAGGGACGGTGGCGGTGGT CGCGGATAAGTCCGGCGGGCACAAAGGAGCGCTTGTGAATGTAGAAGCGA GCGATGCTGACGACGGCGGCGGCAGTGGCGACGGCGGCCGTGGCCCCGGG CAGCGGCGGCAGCGGTGCAGGTGGGGCGGTGGCGCTGGGCGCAGCCAGTA TGGTGGGTTGAGAGAGTGGGAAGAGAAACGGCAGAAGACATGTCTAAACA TCGGGCTGTGTTTCATGGCAGGAATCGCGGGGCAAGGAGGCGGAAGCGCG CGGCTTTGGCAACGGCGCCCGCTCCGCACAATGCTGGGTCGCTTCTTCTT TATGATGGCGTCTCAAGCGAAACAGCACACTGTAGAGATGGACGAGCGAG AGGGGAAGAGGCTGCCGCAATATGTGCAGTGCACCCGGGCAAGAAGAAGG CCTGGAAGCTGCGGCGGCGAGGCCGCGACTGAGGTTGAACTCTTCTTGGC ATAAATGGTAGAGAAAACAGGATCCTCAACCCTTACGTAACACGCTCAGC CAGGAGTCTTAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1255:1145..3857-

>mRNA_P-wetherbeei_contig1255.2.1 ID=mRNA_P-wetherbeei_contig1255.2.1|Name=mRNA_P-wetherbeei_contig1255.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig1255:1145..3857- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGCCAAGGCGGCCGTTGACACCGTCGACGCGGTGGCGGCGTCGCC
GGCGGCGGCGGTGGCGACGGAGGCGTTCCACCGCGTCGTCAGCGACGGCT
TCGACGGCGTTGTGGCGCTGGCCGGGGAGGCGGAGCGCGGTGCGCGTCGC
ATCGCGCGGCGGTGGCTGCGCGGTGGGCTGTCCCTCGCGGCGGCCGACGT
CATGGGGGCGGCGGGCTTCGCGGACGTCGCGGCACGGCTCCTGCCGGGCA
GCAGCGGCGGCGGCGTTAGCGGCGGCGACGGGGCGCCAGCAGTTGCCGGG
CCGGTGGGCGCGGTGGATGCCGAGGGGCCCCATGCGACGCCGCGGCTGGC
GTCGGCGGCGGCGCTCCTCGATAACGGCGGCGTGGCGATGGACGGCGTCT
TCGGCCCCGGCGGCGCCGGCTACCTCGGCGACGACGATGACGGTGGCTAC
ACCAATGGCGGGGCCGGCGGCGGCATCGCGGGGACAGAGGAAACGAAGGA
CGGGGACGGCGGCGCGCGGCGAAGGCGGCGGGAGCAGCGGCAGCCGGTGA
CATGCCCAATCACGGGCATGCCCATTGAGGACCCCGTCGTGGCGGCGGAC
GGCCACAGCTACGAGCGGTCGGCCATCGAGCGGTGGCTGCGGGACCATGA
CACGAGCCCCATGACTGGCGAGACACTCGCCACAAAGGCGCTCTTCCGAA
ACTACTCCCTCCTCACCCGCTAA
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