mRNA_P-wetherbeei_contig12507.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12507.1.1
Unique NamemRNA_P-wetherbeei_contig12507.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F4FDQ8_9PROT (Electron transporter RnfB n=6 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4FDQ8_9PROT)

HSP 1 Score: 410 bits (1055), Expect = 3.880e-141
Identity = 215/249 (86.35%), Postives = 236/249 (94.78%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MKVLV VKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIA+EEA+RL+EAGVATE++AVSCG  ACQETLRTALAIGADRAILV +D ELQPLAVAKLLKAVCAKE+PQLVILGKQAIDDD+NQTGQMLAAL+GW+QATFASK   A+G+AQVTREVDGGL+TIS+KLPA++TTDLRLNEPRYVTLPNIMKAKKK LE ++PDALGVDVAPRLKTLKV EPPKR+AG+KVPDA TLV KLRNEAKVI
Sbjct:    1 MKVLVPVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIALEEAIRLREAGVATEVVAVSCGVPACQETLRTALAIGADRAILVASDAELQPLAVAKLLKAVCAKENPQLVILGKQAIDDDANQTGQMLAALLGWAQATFASKVQVAEGRAQVTREVDGGLDTISVKLPAVITTDLRLNEPRYVTLPNIMKAKKKPLETLQPDALGVDVAPRLKTLKVTEPPKRQAGVKVPDARTLVEKLRNEAKVI 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F4FBI4_9PROT (Electron transporter RnfB n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FBI4_9PROT)

HSP 1 Score: 407 bits (1046), Expect = 9.050e-140
Identity = 213/249 (85.54%), Postives = 234/249 (93.98%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MKVLVSVKRVVD+NVKVRVK+DGTGVETANVKMSMNPFDEIA+EEAVRLKEAGVATEI+AVSCGP ACQETLRTALAIGADRA+LVE+D ELQPLAVAKL+KAVC KESPQLVI+GKQAIDDDSNQTGQMLAAL+GW QATFASK   A+G+A+VTREVDGGLET+S++LPA+VTTDLRLNEPRYVTLPNIMKAKKK+LE +KP+ LGVDVAPRL TLKV EP KRKAG+K+PDA  LV KLRNEAKVI
Sbjct:    1 MKVLVSVKRVVDFNVKVRVKADGTGVETANVKMSMNPFDEIAIEEAVRLKEAGVATEILAVSCGPSACQETLRTALAIGADRAVLVESDAELQPLAVAKLMKAVCLKESPQLVIMGKQAIDDDSNQTGQMLAALLGWPQATFASKLKVANGRAEVTREVDGGLETVSVRLPAVVTTDLRLNEPRYVTLPNIMKAKKKSLEIVKPETLGVDVAPRLATLKVAEPSKRKAGVKLPDAKALVDKLRNEAKVI 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F3Y9E7_9PROT (Electron transporter RnfB n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3Y9E7_9PROT)

HSP 1 Score: 407 bits (1045), Expect = 1.280e-139
Identity = 215/249 (86.35%), Postives = 234/249 (93.98%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MKVLVSVKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIA+EEAVRLKEAGVATE++AVSCG  ACQETLRTALAIGADRAILVE++ ELQPLAVAK+LKAVC KE+P+LVILGKQAIDDDSNQTGQMLAAL+GW QATFASK    + KAQVTREVDGGLET+S++LPAIVT+DLRLNEPRYVTLPNIMKAKKK LEN+KPDALGVD+APRL TLKVVEPPKRKAG++VPDA  LV KLRNEAKVI
Sbjct:    1 MKVLVSVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIALEEAVRLKEAGVATEVVAVSCGAAACQETLRTALAIGADRAILVESNEELQPLAVAKILKAVCQKEAPRLVILGKQAIDDDSNQTGQMLAALLGWPQATFASKIKIENDKAQVTREVDGGLETVSVRLPAIVTSDLRLNEPRYVTLPNIMKAKKKPLENLKPDALGVDIAPRLATLKVVEPPKRKAGVRVPDAKALVDKLRNEAKVI 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A536ZC50_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=8 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZC50_9PROT)

HSP 1 Score: 402 bits (1034), Expect = 6.240e-138
Identity = 216/250 (86.40%), Postives = 231/250 (92.40%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVIS 750
            MK+LV+VKRVVD+NVKVRVK+DG+GVETANVKMSMNPFDEIAVEEA+RLKEAG ATEI+AVSCG  ACQETLRTALA+GADRAILVETDVELQPLAVAKLL AV  KE PQLVILGKQAIDDD NQTGQMLAAL+GWSQATFASK   +DG+A+VTREVDGGLETISIK PA+VTTDLRLNEPRYVTLPNIMKAKKK LE +KPD LGVDVAPRLKTLKV EPPKRKAG KVPDA  LVAKLRNEAKVI+
Sbjct:    1 MKILVAVKRVVDFNVKVRVKADGSGVETANVKMSMNPFDEIAVEEAIRLKEAGAATEIVAVSCGMQACQETLRTALALGADRAILVETDVELQPLAVAKLLLAVARKEIPQLVILGKQAIDDDCNQTGQMLAALLGWSQATFASKVKISDGRAEVTREVDGGLETISIKTPAVVTTDLRLNEPRYVTLPNIMKAKKKPLEVLKPDVLGVDVAPRLKTLKVEEPPKRKAGAKVPDARALVAKLRNEAKVIA 250          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: UPI0019A75A59 (Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A75A59)

HSP 1 Score: 402 bits (1033), Expect = 8.540e-138
Identity = 216/249 (86.75%), Postives = 233/249 (93.57%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MKVLVSVKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEI+AVSCG  ACQETLRTALAIGADRAILVET  ELQPLAVAKLL+ +C KE+P+LVILGKQAIDDDSNQTGQMLAALMGWSQATFASK    + +A+VTREVDGGLET+SIKLPAIVTTDLRLNEPRYVTLPNIMKAKKK LEN KP+ALGVDV+PRL+T+KVVEPPKRKAG+KVPD  +LV +LRNEAKVI
Sbjct:    1 MKVLVSVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIVAVSCGLPACQETLRTALAIGADRAILVETSEELQPLAVAKLLQKICEKEAPRLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKLVVENEQAKVTREVDGGLETLSIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKPLENHKPEALGVDVSPRLQTIKVVEPPKRKAGVKVPDPKSLVDRLRNEAKVI 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F4AVJ0_9PROT (Electron transporter RnfB n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AVJ0_9PROT)

HSP 1 Score: 401 bits (1031), Expect = 1.720e-137
Identity = 213/249 (85.54%), Postives = 230/249 (92.37%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MKVLV VKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIAVEEA+RL+EAGVATE+IAVSCG  ACQETLRTALAIGADRAILVE++VELQPLAVAKLLKAVC KE PQLV+LGKQAIDDD+NQTGQMLA L+GW+QATFASK        QVTREVDGGL+TI+IKLPA+VTTDLRLNEPRYVTLPNIMKAKKK +E +KP+ALGVDVAPRLKTLKV EPPKRKAG+KVPDA TLV KLRNEAKVI
Sbjct:    1 MKVLVPVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIAVEEAMRLREAGVATEVIAVSCGVTACQETLRTALAIGADRAILVESNVELQPLAVAKLLKAVCEKEKPQLVLLGKQAIDDDANQTGQMLAGLLGWAQATFASKVKVEGESVQVTREVDGGLDTIAIKLPAVVTTDLRLNEPRYVTLPNIMKAKKKPMETLKPEALGVDVAPRLKTLKVTEPPKRKAGVKVPDAKTLVEKLRNEAKVI 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A536XX75_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XX75_9PROT)

HSP 1 Score: 397 bits (1020), Expect = 8.060e-136
Identity = 209/249 (83.94%), Postives = 230/249 (92.37%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MKVLV+VKRVVD+NVKVRVK+D +GVETANVKMSMNPFDEIAVE AVRLKEAG ATEIIA+SCG   CQETLRTALAIGADRAILVET  ELQPLAVAKLL+A+C KESPQLVI+GKQAIDDDSNQTGQMLAAL+GW QATFASK   A+G+A+VTREVDGGLET+SIKLPA++TTDLRLNEPRYVTLPNIMKAKKK LE +KP+ALGVDV+PRL TLKVVEPPKRKAG+KVPDA  L+ KLRNEAKV+
Sbjct:    1 MKVLVAVKRVVDFNVKVRVKADNSGVETANVKMSMNPFDEIAVEAAVRLKEAGSATEIIAISCGVAQCQETLRTALAIGADRAILVETAAELQPLAVAKLLRAICQKESPQLVIMGKQAIDDDSNQTGQMLAALLGWPQATFASKIELAEGRAKVTREVDGGLETVSIKLPAVITTDLRLNEPRYVTLPNIMKAKKKALETLKPEALGVDVSPRLATLKVVEPPKRKAGVKVPDAKALLEKLRNEAKVL 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A521Z068_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521Z068_9PROT)

HSP 1 Score: 396 bits (1017), Expect = 2.300e-135
Identity = 215/249 (86.35%), Postives = 228/249 (91.57%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MK+LVSVKRVVD+NVKVRVK+DGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEI+ VSCG  ACQETLRTALAIGADRAILVET+ ELQPLAVAKLLK V  KE P LVILGKQAIDDD+NQTGQMLAAL+ W QATFASK   + GKA+VTREVDGGLET+SIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLE +KPDALGVDVAPRL T+KVVEP KRKAGIKVPDA  LV KLRNEAKV+
Sbjct:    1 MKILVSVKRVVDFNVKVRVKADGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIVVVSCGAQACQETLRTALAIGADRAILVETNEELQPLAVAKLLKKVTEKEQPGLVILGKQAIDDDANQTGQMLAALLNWPQATFASKVKISSGKAEVTREVDGGLETLSIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLEILKPDALGVDVAPRLTTVKVVEPSKRKAGIKVPDAKALVDKLRNEAKVL 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A537A3X3_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A3X3_9PROT)

HSP 1 Score: 392 bits (1008), Expect = 5.350e-134
Identity = 212/249 (85.14%), Postives = 227/249 (91.16%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MK+LV+VKRVVD+NVKVRVK+D TGVETANVKMSMNPFDEIAVE AVRLKEAG ATEI+AVSCG  ACQETLRTALAIGADRAILVET  ELQPLAVAKLLKA+C KESPQLVILGKQAIDDD+NQTGQMLAAL+GW QATFASK   A   A+VTREVDGGLET+SIKLPA++TTDLRLNEPRYVTLPNIMKAKKKTLE +KP+ALGVDVAPRL TLKVVEP KRKAGIKV DA  LV KLRN+AKVI
Sbjct:    1 MKILVAVKRVVDFNVKVRVKADNTGVETANVKMSMNPFDEIAVEAAVRLKEAGAATEIVAVSCGVQACQETLRTALAIGADRAILVETSEELQPLAVAKLLKAICQKESPQLVILGKQAIDDDANQTGQMLAALLGWPQATFASKIELAGQGAKVTREVDGGLETVSIKLPAVITTDLRLNEPRYVTLPNIMKAKKKTLEALKPEALGVDVAPRLATLKVVEPAKRKAGIKVADAKALVDKLRNDAKVI 249          
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A6N4T7P0_9BURK (Electron transfer flavoprotein subunit beta n=28 Tax=Bacteria TaxID=2 RepID=A0A6N4T7P0_9BURK)

HSP 1 Score: 392 bits (1007), Expect = 7.870e-134
Identity = 209/249 (83.94%), Postives = 224/249 (89.96%), Query Frame = 1
Query:    1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747
            MKVLV VKRVVDYNVKVRVKSDG+GV+ ANVKMSMNPFDEIAVEEA RLKEAGV TE++AVSCG   CQETLRTA+AIGADR ILVE+DVELQPLAVAKLLKA+  KE PQL+ILGKQAIDDD NQTGQMLAAL+GW QATFASK   ADGKA VTREVDGGLET+S+ LPAI+TTDLRLNEPRYVTLPNIMKAKKK L+N+KP  LGVDVA R+KTLKV EPPKR AGIKVPD ATLVAKLRNEAKVI
Sbjct:    1 MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEATRLKEAGVVTEVVAVSCGVAQCQETLRTAMAIGADRGILVESDVELQPLAVAKLLKALADKEQPQLIILGKQAIDDDCNQTGQMLAALLGWPQATFASKVTVADGKATVTREVDGGLETLSLTLPAIITTDLRLNEPRYVTLPNIMKAKKKQLDNVKPADLGVDVASRVKTLKVTEPPKRSAGIKVPDVATLVAKLRNEAKVI 249          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4FDQ8_9PROT3.880e-14186.35Electron transporter RnfB n=6 Tax=unclassified Bet... [more]
A0A1F4FBI4_9PROT9.050e-14085.54Electron transporter RnfB n=1 Tax=Betaproteobacter... [more]
A0A1F3Y9E7_9PROT1.280e-13986.35Electron transporter RnfB n=1 Tax=Betaproteobacter... [more]
A0A536ZC50_9PROT6.240e-13886.40Electron transfer flavoprotein subunit beta/FixA f... [more]
UPI0019A75A598.540e-13886.75Electron transfer flavoprotein subunit beta/FixA f... [more]
A0A1F4AVJ0_9PROT1.720e-13785.54Electron transporter RnfB n=1 Tax=Betaproteobacter... [more]
A0A536XX75_9PROT8.060e-13683.94Electron transfer flavoprotein subunit beta/FixA f... [more]
A0A521Z068_9PROT2.300e-13586.35Electron transfer flavoprotein subunit beta/FixA f... [more]
A0A537A3X3_9PROT5.350e-13485.14Electron transfer flavoprotein subunit beta/FixA f... [more]
A0A6N4T7P0_9BURK7.870e-13483.94Electron transfer flavoprotein subunit beta n=28 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12507contigP-wetherbeei_contig12507:3..1195 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1504672.669786262
Preferred nameetfB
PFAMsETF
Model size1193
Max annot lvl28216|Betaproteobacteria
KEGG koko:K03521
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.87e-136
EggNOG OGsCOG2086@1|root,COG2086@2|Bacteria,1MVH6@1224|Proteobacteria,2VHXJ@28216|Betaproteobacteria,4ABCD@80864|Comamonadaceae
DescriptionElectron transfer flavoprotein
Cds size753
COG categoryC
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185951.1226573-UTR-P-wetherbeei_contig12507:2..4421683185951.1226573-UTR-P-wetherbeei_contig12507:2..442Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12507 3..442 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185951.1341312-CDS-P-wetherbeei_contig12507:442..11951683185951.1341312-CDS-P-wetherbeei_contig12507:442..1195Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12507 443..1195 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12507.1.1prot_P-wetherbeei_contig12507.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12507 443..1195 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12507.1.1

>prot_P-wetherbeei_contig12507.1.1 ID=prot_P-wetherbeei_contig12507.1.1|Name=mRNA_P-wetherbeei_contig12507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLK
EAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKL
LKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAAD
GKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLE
NIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVIS
*
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mRNA from alignment at P-wetherbeei_contig12507:3..1195-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12507.1.1 ID=mRNA_P-wetherbeei_contig12507.1.1|Name=mRNA_P-wetherbeei_contig12507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1193bp|location=Sequence derived from alignment at P-wetherbeei_contig12507:3..1195- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAGTCCTCGTCAGCGTCAAGCGCGTGGTGGACTACAACGTCAAGGT GCGCGTCAAGTCCGACGGCACCGGCGTGGAGACCGCGAACGTGAAAATGT CCATGAACCCCTTCGACGAGATCGCGGTCGAAGAGGCCGTCCGCCTCAAG GAAGCCGGGGTCGCCACCGAGATCATCGCGGTGTCGTGCGGCCCGCTCGC CTGCCAGGAGACGCTGCGCACGGCGCTCGCCATCGGCGCGGATCGCGCGA TCCTGGTCGAGACCGACGTGGAACTGCAGCCGCTGGCCGTGGCCAAGCTG CTGAAGGCCGTCTGCGCCAAGGAGTCGCCCCAGCTGGTGATCCTCGGCAA GCAGGCGATCGACGACGACTCCAACCAGACCGGCCAGATGCTGGCCGCGC TGATGGGCTGGTCGCAGGCGACCTTCGCCTCCAAGTTCGCCGCCGCCGAC GGCAAGGCCCAGGTCACGCGTGAAGTCGACGGCGGCCTCGAGACGATCTC GATCAAGCTGCCCGCCATCGTGACCACGGACCTGCGCCTGAACGAGCCGC GCTACGTCACGCTGCCGAACATCATGAAGGCCAAGAAGAAGACGCTGGAA AACATCAAGCCCGACGCGCTCGGCGTCGACGTGGCGCCGCGCCTCAAGAC CCTCAAGGTGGTCGAGCCGCCCAAGCGCAAGGCCGGCATCAAGGTGCCCG ACGCGGCAACGCTGGTCGCCAAACTCAGGAACGAAGCGAAGGTGATCTCA TGAGCTGCCTCGTCATTGCGGAACACGACAACAAGTCGATCAAGGGCGCC ACGCTGAACACCGTCGCGGCTGCTGCGAAGATCGGCGGCGACATCCACGT GCTGGTGGCCGGCAGCGGCTCGGCCGCGGCGGCCGAAGCCGCCTCGAAGA TCGCCGGCGTCACGAAGGTGCTGCACGCGGATGCGCCGCACCTCGCGGAT TTCCTCGCCGAGAACGTCGCTGCCGTCGTCGTCGGCGTGGCCGGGGGCTA CAGCCATGTGCTCGCGCCCGCGACCTCGAACGGCAAGAACGTATTGCCGC GCGTCGCCGCGCTGCTCGACATGCAGCAGATCTCGGAGATCGTCTCGGTC GAATCGGCCGACACCTTCGTGCGCCCGATCTACGCGGGCAACGCGCTGGC GACCGTGCAATCGTCCGATGCCAGCAAGGTCATCACCGTTCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12507:3..1195-

>mRNA_P-wetherbeei_contig12507.1.1 ID=mRNA_P-wetherbeei_contig12507.1.1|Name=mRNA_P-wetherbeei_contig12507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig12507:3..1195- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAGTCCTCGTCAGCGTCAAGCGCGTGGTGGACTACAACGTCAAGGT
GCGCGTCAAGTCCGACGGCACCGGCGTGGAGACCGCGAACGTGAAAATGT
CCATGAACCCCTTCGACGAGATCGCGGTCGAAGAGGCCGTCCGCCTCAAG
GAAGCCGGGGTCGCCACCGAGATCATCGCGGTGTCGTGCGGCCCGCTCGC
CTGCCAGGAGACGCTGCGCACGGCGCTCGCCATCGGCGCGGATCGCGCGA
TCCTGGTCGAGACCGACGTGGAACTGCAGCCGCTGGCCGTGGCCAAGCTG
CTGAAGGCCGTCTGCGCCAAGGAGTCGCCCCAGCTGGTGATCCTCGGCAA
GCAGGCGATCGACGACGACTCCAACCAGACCGGCCAGATGCTGGCCGCGC
TGATGGGCTGGTCGCAGGCGACCTTCGCCTCCAAGTTCGCCGCCGCCGAC
GGCAAGGCCCAGGTCACGCGTGAAGTCGACGGCGGCCTCGAGACGATCTC
GATCAAGCTGCCCGCCATCGTGACCACGGACCTGCGCCTGAACGAGCCGC
GCTACGTCACGCTGCCGAACATCATGAAGGCCAAGAAGAAGACGCTGGAA
AACATCAAGCCCGACGCGCTCGGCGTCGACGTGGCGCCGCGCCTCAAGAC
CCTCAAGGTGGTCGAGCCGCCCAAGCGCAAGGCCGGCATCAAGGTGCCCG
ACGCGGCAACGCTGGTCGCCAAACTCAGGAACGAAGCGAAGGTGATCTCA
TGA
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