mRNA_P-wetherbeei_contig125.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig125.5.1
Unique NamemRNA_P-wetherbeei_contig125.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A835ZEU0_9STRA (Putative histone deacetylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEU0_9STRA)

HSP 1 Score: 358 bits (919), Expect = 1.780e-115
Identity = 182/300 (60.67%), Postives = 211/300 (70.33%), Query Frame = 2
Query:  209 HTADYVDRIKTMSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALR------HHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVIAAAEANVNVL 1090
            HT +Y+ R+K +S  GGGD G+E     GG +I  L+AG A+ AVDAV+ G   NAYAL+RPPGHHAVA   MGFC++NN+ + AHHALR           VRRVAIVD+DVHHGNGTQ AF  DPRVLF+SLHQD NYP+ +GKV E G                    AY A F+R+V PAVDAF PDLLLVS+G+D SF+DPLA MML+ E FR  A  +V LAE+HC GRAVF+HEGGYSD YVPFCGLAV E LAGCRT V DPLLAEA  F  QALQP QDA IAAAEAN+ +L
Sbjct:   59 HTPEYIARVKALSAGGGGDIGEETHIDRGGFDIVALAAGGALAAVDAVLSGATLNAYALLRPPGHHAVADNAMGFCVFNNVAVGAHHALRGXXXXXXXXXXVRRVAIVDFDVHHGNGTQAAFEADPRVLFVSLHQDGNYPKTTGKVGEVGVGDGRGTTLNVPLPPGSGEGAYAAAFERVVVPAVDAFEPDLLLVSAGYDASFMDPLAHMMLSSEAFRAMAARLVALAERHCGGRAVFLHEGGYSDVYVPFCGLAVVEELAGCRTQVRDPLLAEAQAFAQQALQPHQDAAIAAAEANLTLL 358          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A535JD38_9CHLR (Class II histone deacetylase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535JD38_9CHLR)

HSP 1 Score: 320 bits (819), Expect = 1.670e-100
Identity = 187/362 (51.66%), Postives = 231/362 (63.81%), Query Frame = 2
Query:    8 NLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVIAAAEANVNVLR 1093
            NLV  SGL D LV LK R+ATE+E+                                          HT +Y+DRIK  S   GG+AG+E PF HG +EIALL+AG  + AV+AV+DG+ DNAYALVRPPGHHA    G GFC++ N  +AA HA +  G  + RVAIVD+DVHHGNGT+ AFY+DP VL IS+HQD+NYP  SG + +TGA XXXXXXXXXXXX      AY A FDR+VAPA+ AFRP+L+LV+SG D S +DPLA MM+T + +R   + ++E+A + C GR V  HEGGYS AYVP+CGLA+ E +AG RT + DPLL     FG Q LQP Q+AVI  A      LR
Sbjct:   35 NLVEVSGLMDHLVQLKPRMATEDEI---------------------------------------ARLHTREYMDRIKKSSSERGGEAGEETPFGHGSYEIALLAAGGCLAAVEAVLDGKVDNAYALVRPPGHHAERDHGRGFCIFANTALAAAHARQARG--LSRVAIVDWDVHHGNGTEHAFYEDPTVLTISIHQDNNYPPKSGAIGDTGAGXXXXXXXXXXXXPGSGVGAYVAAFDRVVAPALRAFRPELILVASGLDASAMDPLASMMMTSDGYRKLTQVVLEVAREVCGGRLVACHEGGYSPAYVPYCGLAIIEEMAGVRTGLADPLLGLLAAFGGQELQPHQEAVIQEAAKLATALR 355          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A536GZ00_9CHLR (Class II histone deacetylase n=4 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536GZ00_9CHLR)

HSP 1 Score: 318 bits (816), Expect = 3.720e-100
Identity = 182/351 (51.85%), Postives = 226/351 (64.39%), Query Frame = 2
Query:    8 NLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVI 1060
            NL+  SGL D LV LK R ATE E+L                                         HT +YV+RIK MS   GG+AG+E PF  G +EIALL+AG  + +VDAV+DG+ DNAYALVRPPGHHA    G GFC++ N  +AA HA +  G  + RVAIVD+DVHHGNGT+ AFY DP VL +S+HQD+NYP  SG + +TG  XXXXXXXXXXXX      AY ATF+R+VAPA+ AFRP+L+L++SG D S +DPLA MM+T E +R     ++ +A   C+GR V  HEGGYS AYVP+CGLA+ E LAG RT ++DPLL    GFG Q LQP Q+AV+
Sbjct:   24 NLLEVSGLIDHLVQLKPRPATEREIL---------------------------------------RLHTREYVERIKKMSSEAGGEAGEETPFGRGSYEIALLAAGGCITSVDAVLDGKVDNAYALVRPPGHHAEKDQGRGFCIFGNTAVAALHARQARG--LSRVAIVDWDVHHGNGTEHAFYSDPTVLTLSIHQDNNYPPASGAITDTGEGXXXXXXXXXXXXPGSGVGAYVATFERVVAPALRAFRPELILIASGLDASAMDPLASMMMTSEGYRTLTRIVLAVARDVCRGRLVACHEGGYSPAYVPYCGLAIIEELAGIRTGLDDPLLGLLAGFGGQELQPHQEAVV 333          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A383VE60_TETOB (Hist_deacetyl domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VE60_TETOB)

HSP 1 Score: 315 bits (806), Expect = 2.420e-98
Identity = 190/356 (53.37%), Postives = 231/356 (64.89%), Query Frame = 2
Query:    2 FANLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSM---AGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVI 1060
            F NL++ASGL D L  +K R AT +EL                                       C  HT  YV+ ++ +S     G   AG +  F  GG+EIA L+AG ++  VDA +DG   N YALVRPPGHHA A  GMGFC++NNI +AA HAL   G  + R+AIVDYDVHHGNGTQ+ F++D RVLFIS+HQD NYP  SG + +TG+XXXXXXXXXXXXXXXXXX AYRA FDR+V PA+DAF P L+LVSSGFD SF DPLAQ M T ED+R F + +   A++HC GR ++ HEGGYS AYVPFCGLAV E L+G +T ++D  L +    G QALQPWQDAVI
Sbjct:   41 FNNLIHASGLIDKLQQVKARTATVQEL---------------------------------------CRVHTQRYVEYVQELSKDSSKGIHKAGPDVAFGPGGYEIAALAAGGSIAIVDATLDGSIRNGYALVRPPGHHACADQGMGFCVFNNIAVAAAHALEARG--LSRIAIVDYDVHHGNGTQEMFWEDDRVLFISIHQDSNYPLNSGPLTDTGSXXXXXXXXXXXXXXXXXXGAYRAVFDRVVVPALDAFEPQLVLVSSGFDASFFDPLAQQMCTSEDYRYFTQVMSAAADRHCSGRLLYFHEGGYSAAYVPFCGLAVMEQLSGHKTQMQDVFLGD-TAVGGQALQPWQDAVI 354          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A7J7QEY8_9CHLO (Histone deacetylase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEY8_9CHLO)

HSP 1 Score: 317 bits (812), Expect = 2.680e-98
Identity = 200/364 (54.95%), Postives = 238/364 (65.38%), Query Frame = 2
Query:    8 NLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSM---AGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVIAAAEANVNVL 1090
            NL++ASGL D L  +K R AT                IQEL  +                       HT +YV  I+ +S     G   AG +  F  GG+EIA L+AG ++  VDA +DG   N YALVRPPGHHA A  GMGFC++NNI +AA HAL   G  + RVAIVDYDVHHGNGTQD F++D RVLFIS+HQD NYP  SG + +TG+XXXXXXXXXXXXXXXXXXXAYRA FDR+V PA+D F P L+LVSSGFD SF DPLAQ M T ED+R F + + E A+KHC GR ++ HEGGYS AYVPFCGLAV E L+G +T ++D LL +    G QALQPWQ+AVIA  EA   VL
Sbjct:  108 NLIHASGLIDKLQQIKARPAT----------------IQELGRV-----------------------HTQNYVGDIQDLSCDSSKGIHKAGPDVAFGPGGYEIAALAAGGSIAIVDAALDGSIKNGYALVRPPGHHACAHQGMGFCVFNNIAVAAAHALEARG--LSRVAIVDYDVHHGNGTQDMFWEDGRVLFISIHQDSNYPLNSGPITDTGSXXXXXXXXXXXXXXXXXXXAYRAVFDRVVGPALDVFAPQLVLVSSGFDASFFDPLAQQMCTSEDYRYFTKVMSEAADKHCNGRLLYFHEGGYSAAYVPFCGLAVMEQLSGHKTQMQDVLLGD-TAVGGQALQPWQEAVIAQVEAGPLVL 429          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A6V1S9C0_HETAK (Histone deacetylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S9C0_HETAK)

HSP 1 Score: 314 bits (804), Expect = 6.820e-98
Identity = 167/351 (47.58%), Postives = 208/351 (59.26%), Query Frame = 2
Query:    8 NLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVI 1060
            NL++ SGL D +  +K R+A+EEELL                                        FH++DYV+++K +S   GG+AGD A F  GG EIA L+ G  + AVD V+ G  DNAY L RPPGHHA    GMGFCL+NN+ +AA HAL   G  + R+AI+DYDVHHGNGTQ AF++D RVLFIS+HQD NYP  SG V E G+                   AY    D +V PA+DAF P+L+LVSSG+D +F+DPL   ML  +DFR  A  ++ LA+ H  GR VF+HEGGYSD YVPFCGLAV E L G RT VED L  +   +GYQ  QP Q AV+
Sbjct:   47 NLLDLSGLTDQMTVVKPRIASEEELL---------------------------------------RFHSSDYVEKVKDLSSKYGGEAGDCATFMKGGFEIASLAVGGTIDAVDKVVKGELDNAYVLCRPPGHHATREQGMGFCLFNNVALAAMHALEMCG--ISRIAIIDYDVHHGNGTQQAFFEDDRVLFISIHQDCNYPLDSGHVTENGSGKGLYHTINIPLPPGSGSGAYHLAMDSVVVPAIDAFSPELILVSSGYDAAFLDPLGCQMLISDDFRQMAHVLISLADSHSGGRIVFVHEGGYSDIYVPFCGLAVCEELTGIRTEVEDNLKLDGQNWGYQEAQPHQTAVV 356          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A2A4TKZ7_9PROT (Class II histone deacetylase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4TKZ7_9PROT)

HSP 1 Score: 313 bits (802), Expect = 7.630e-98
Identity = 172/360 (47.78%), Postives = 213/360 (59.17%), Query Frame = 2
Query:    2 FANLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVIAAAEANV 1081
            F NL++ASG  D L  +K R ATEEE+L                                        FHT DY+ R+K MS  GGGDAG+  P  HG +EIA LSAG  + AVD+VM G CDNAY L RPPGHHA A MG GFC++ NIVIAA HAL   G  V R+A+VD+DVHHGNGT+ AFYDDPRVL IS+HQD+ YP+  G V + G                    AY A FDR+V PA+ A++PDL+ V+SGFD S  DPL +MM+    +      ++ LA+  C+GR V  HEGGYS  YVPFCGLAV EA++G ++ V+DP L  A G G   LQP QD +++ AEA V
Sbjct:   45 FKNLLDASGFIDTLHLIKPRDATEEEIL---------------------------------------RFHTPDYLQRVKDMSAIGGGDAGELTPVGHGSYEIAKLSAGGLIAAVDSVMAGECDNAYVLNRPPGHHADADMGRGFCIFGNIVIAAKHALETMG--VERIAVVDWDVHHGNGTETAFYDDPRVLTISMHQDNWYPQGRGLVTDVGEGKGEGYAVNMPLPPGSGTGAYEAAFDRVVVPALRAYKPDLIFVASGFDASAFDPLGRMMMHSAGYESLTNKLMALADDLCEGRVVMAHEGGYSPYYVPFCGLAVLEAMSGQKSGVQDPYLDFAAGMGGHDLQPGQDQILSQAEAVV 363          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A535ZF30_9CHLR (Class II histone deacetylase n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535ZF30_9CHLR)

HSP 1 Score: 311 bits (798), Expect = 3.210e-97
Identity = 168/351 (47.86%), Postives = 211/351 (60.11%), Query Frame = 2
Query:    8 NLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVI 1060
            +L+  SGL D LV LK R ATE+E+L                                         HT +YV+RIK +S   GG+AG+E PF  G  EIALL+AG  + AVD+V+DG+ DNAYALVRPPGHHA    G GFC++ N  +AA HA    G  + RVAIVD+DVHHGNGT+ AFY DP VL IS+HQD+NYP  SG + + G                    AY ATF+R+VAPA+ AFRP+L+L++SG D S +DPLA MM+T E +R    T++ +A   C GR V  HEGGYS AYVP+CGLA+ E LAG RT V+DPLL     FG Q +QP Q+AV+
Sbjct:   46 SLIEVSGLIDHLVQLKPRPATEDEIL---------------------------------------RMHTKEYVERIKRLSSGAGGEAGEETPFGRGSFEIALLAAGGCITAVDSVLDGKVDNAYALVRPPGHHAERDQGRGFCIFGNTALAAMHAREARG--LSRVAIVDWDVHHGNGTEHAFYSDPSVLTISIHQDNNYPPGSGGITDIGEGAGLGYNINVPLPPGSGVGAYVATFERVVAPALTAFRPELILIASGLDASAMDPLASMMMTSEGYRTLTRTVLGVARDVCGGRLVACHEGGYSPAYVPYCGLAIIEELAGRRTGVDDPLLGLLAAFGGQEIQPHQEAVV 355          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A1Q7C0U2_9ACTN (Class II histone deacetylase n=1 Tax=Actinobacteria bacterium 13_2_20CM_2_66_6 TaxID=1803492 RepID=A0A1Q7C0U2_9ACTN)

HSP 1 Score: 311 bits (797), Expect = 3.500e-97
Identity = 188/351 (53.56%), Postives = 232/351 (66.10%), Query Frame = 2
Query:    8 NLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVI 1060
            NL+  SGL D LV LK R ATE+E+L                                         HT +YVDRIK  S   GGDAG+  PF  G +EIALL+AG  + AVDAV+DG+ DNAYALVRPPGHHA    G GFC++ N+ IAA HA +  G  +RRVA+VD+DVHHGNGT+ AFYDDP VL IS+HQD+NYP  SG + +TG+XXXXXXXXXXXXXXXXX  AY ATF+R+VAPA+  +RP+L++V+SG D S +DPLA MM+T + +R   + ++ +A + C GR V  HEGGYS AYVPFCGLA+ E LAG RT + DPLL     FG Q LQP Q+AV+
Sbjct:   35 NLIEVSGLIDHLVLLKPRAATEDEVL---------------------------------------RLHTREYVDRIKDESSKMGGDAGELTPFGPGSYEIALLAAGGCIAAVDAVVDGKVDNAYALVRPPGHHAERDTGRGFCIFANVAIAATHARQVRG--LRRVAVVDWDVHHGNGTEHAFYDDPSVLTISIHQDNNYPPNSGAMTDTGSXXXXXXXXXXXXXXXXXVGAYVATFERVVAPALRNYRPELIIVASGLDASAMDPLASMMMTSDGYRKLTQVMLGVAHEVCGGRLVMCHEGGYSPAYVPFCGLAIMEELAGVRTELADPLLDLLASFGGQDLQPHQEAVL 344          
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Match: A0A2V0NX33_9CHLO (Class II histone deacetylase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NX33_9CHLO)

HSP 1 Score: 309 bits (791), Expect = 1.540e-95
Identity = 184/358 (51.40%), Postives = 220/358 (61.45%), Query Frame = 2
Query:    8 NLVNASGLEDVLVPLKGRLATEEELL**VAEGCFCSLIQELKSLRSGST*NDFSLPDS*QNPPFCSFHTADYVDRIKTMS---MAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVRPPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNGTQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAXXXXXXXXXXXXXXXXXXXAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFRCFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVEDPLLAEANGFGYQALQPWQDAVIAAAE 1072
            NLV  SGL + L PL  R AT  EL                                          H   YV+ + ++S     G    GDE+ F+ GG EIA LSAG AVVA + V+ G   NAYAL RPPGHHA    G+G+C++NN+ +AA HAL  HG  + RVA+VD+DVHHGNGTQ  FY+DPRVLFISLHQD NYP  SG   E GA XXXXXXXXXXXX      AYRA FDR+V PA+DA+RP LL VS+G+D S++DPL  MML+ ED+R F   +   AE+HC G  V +HEGGYSD YVPFCGLA  EA+AG R+ V DP L++  GFG+QALQP Q  VIA  E
Sbjct:   51 NLVAVSGLMEQLRPLAPRAATVAEL---------------------------------------SRVHDRSYVEAVASLSDDHTKGIHRVGDESGFAPGGFEIAALSAGGAVVATEEVLRGSVTNAYALCRPPGHHAERSTGLGYCIFNNVAVAAAHALDSHG--LERVAVVDFDVHHGNGTQSIFYEDPRVLFISLHQDGNYPLHSGATTENGAGXXXXXXXXXXXXPGSGGGAYRAAFDRVVLPALDAYRPQLLYVSAGYDASYMDPLGHMMLSSEDYRYFMAALRAAAERHCGGALVALHEGGYSDVYVPFCGLAAIEAMAGARSKVSDPYLSDVEGFGWQALQPHQAEVIARCE 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig125.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEU0_9STRA1.780e-11560.67Putative histone deacetylase (Fragment) n=1 Tax=Tr... [more]
A0A535JD38_9CHLR1.670e-10051.66Class II histone deacetylase n=1 Tax=Chloroflexi b... [more]
A0A536GZ00_9CHLR3.720e-10051.85Class II histone deacetylase n=4 Tax=Chloroflexi b... [more]
A0A383VE60_TETOB2.420e-9853.37Hist_deacetyl domain-containing protein n=1 Tax=Te... [more]
A0A7J7QEY8_9CHLO2.680e-9854.95Histone deacetylase n=1 Tax=Scenedesmus sp. NREL 4... [more]
A0A6V1S9C0_HETAK6.820e-9847.58Histone deacetylase n=1 Tax=Heterosigma akashiwo T... [more]
A0A2A4TKZ7_9PROT7.630e-9847.78Class II histone deacetylase n=1 Tax=Alphaproteoba... [more]
A0A535ZF30_9CHLR3.210e-9747.86Class II histone deacetylase n=3 Tax=Chloroflexi b... [more]
A0A1Q7C0U2_9ACTN3.500e-9753.56Class II histone deacetylase n=1 Tax=Actinobacteri... [more]
A0A2V0NX33_9CHLO1.540e-9551.40Class II histone deacetylase n=1 Tax=Raphidocelis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig125contigP-wetherbeei_contig125:7405..9943 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3067.XP_002956564.1
PFAMsHist_deacetyl
Model size1919
Max annot lvl3041|Chlorophyta
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.62e-87
EggNOG OGsCOG0123@1|root,COG2940@1|root,KOG1343@2759|Eukaryota,KOG2084@2759|Eukaryota,37N54@33090|Viridiplantae,34JFX@3041|Chlorophyta
Descriptionhistone deacetylase
Cds size888
COG categoryB
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig125.5.1prot_P-wetherbeei_contig125.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig125 7646..9043 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185950.6932542-UTR-P-wetherbeei_contig125:7404..76451683185950.6932542-UTR-P-wetherbeei_contig125:7404..7645Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig125 7405..7645 +
1683185950.7511415-UTR-P-wetherbeei_contig125:9043..94661683185950.7511415-UTR-P-wetherbeei_contig125:9043..9466Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig125 9044..9466 +
1683185950.758607-UTR-P-wetherbeei_contig125:9576..99431683185950.758607-UTR-P-wetherbeei_contig125:9576..9943Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig125 9577..9943 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185950.7170486-CDS-P-wetherbeei_contig125:7645..78311683185950.7170486-CDS-P-wetherbeei_contig125:7645..7831Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig125 7646..7831 +
1683185950.7310305-CDS-P-wetherbeei_contig125:8130..83231683185950.7310305-CDS-P-wetherbeei_contig125:8130..8323Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig125 8131..8323 +
1683185950.74014-CDS-P-wetherbeei_contig125:8534..90431683185950.74014-CDS-P-wetherbeei_contig125:8534..9043Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig125 8535..9043 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig125.5.1

>prot_P-wetherbeei_contig125.5.1 ID=prot_P-wetherbeei_contig125.5.1|Name=mRNA_P-wetherbeei_contig125.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=296bp
MSMAGGGDAGDEAPFSHGGHEIALLSAGSAVVAVDAVMDGRCDNAYALVR
PPGHHAVAVMGMGFCLYNNIVIAAHHALRHHGDTVRRVAIVDYDVHHGNG
TQDAFYDDPRVLFISLHQDDNYPRPSGKVEETGAGAGTGYNLNVPLPPGS
GSGAYRATFDRIVAPAVDAFRPDLLLVSSGFDGSFVDPLAQMMLTGEDFR
CFAETIVELAEKHCKGRAVFMHEGGYSDAYVPFCGLAVTEALAGCRTAVE
DPLLAEANGFGYQALQPWQDAVIAAAEANVNVLRGILARADGAVA*
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mRNA from alignment at P-wetherbeei_contig125:7405..9943+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig125.5.1 ID=mRNA_P-wetherbeei_contig125.5.1|Name=mRNA_P-wetherbeei_contig125.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2539bp|location=Sequence derived from alignment at P-wetherbeei_contig125:7405..9943+ (Phaeothamnion wetherbeei SAG_119_79)
CTTCGCTAACTTGGTAAATGCCTCGGGCCTTGAAGACGTGCTAGTCCCTC TCAAGGGCCGACTGGCGACAGAAGAAGAGCTTCTTTAGTAAGTCGCGGAA GGCTGCTTTTGTTCGCTCATTCAGGAGTTGAAGTCTCTGCGTTCCGGGAG CACTTAAAATGACTTCAGCCTGCCCGATTCATAACAAAACCCTCCCTTTT GCAGTTTTCACACAGCCGACTATGTGGATAGAATCAAAACGATGAGCATG GCCGGCGGTGGCGATGCAGGCGACGAGGCCCCCTTCAGCCATGGCGGCCA TGAGATTGCGTTGCTGTCGGCCGGATCGGCCGTGGTCGCCGTCGACGCCG TGATGGACGGGCGCTGCGACAACGCCTACGCGTTGGTCCGGCCGCCGGGG CACCACGCCGTCGCCGTCATGGGGATGGTGAGGCAAGGAATCGGGGCAGC GAGGGAAGGGAGAGGGCAGCAAGGAAAAAAGAGGGTGGCCGGCACTGTAG TTTGTCGCTGTCGGTGCAGCATTTTTCGCAGGGCTCAACCCTCTTCTCGC GTCATGATACCCTTTCAGTTTCGTTGGTTCAATCGCTTACAACGCGTTCA TTATTTTCTGTAAAAGCAGTAGGACCTTTTCTATCAATTTCTGCGTCTTG TTTATATTGCCTCATTCTCCTCTCGCCCGCCTTCCATTCTGCTCTTCTGT GGCTGAATTCTCTGTGTACAAAAAAGGGGTTTTGCCTCTACAACAACATC GTCATCGCGGCGCACCACGCGCTCCGGCATCACGGTGACACTGTAAGACG CGTGGCAATCGTCGACTACGACGTGCACCACGGCAACGGCACGCAGGACG CGTTTTACGACGACCCACGGGTGCTGTTCATCAGCCTGCACCAGGACGAC AACTACCCGCGGCCATCAGGCGAGTCTGCGGCAGCCGATGCCGAAATGGT TGATACCTTCTGGTTGATGTTGTGTCTGAAAACACTGGCGTTTTCTTTTT GGGGAAAGGCTTTCATAACGTTCCCTGTTCACCACATCATTTAGGCTTCT CCTCAGCGAAAAGAGTGACTGATTCGCGGAAGCCGTTCTCACACCTGACG GTTTGAAGAATGGCATGACAAACAAAACAGGCAAGGTGGAAGAGACGGGC GCAGGCGCCGGCACTGGCTACAATCTCAACGTGCCGCTGCCGCCGGGCAG CGGCTCGGGCGCCTACCGCGCCACCTTCGACCGCATCGTCGCGCCGGCCG TCGATGCTTTCCGACCGGACCTCCTCCTGGTGTCCAGCGGCTTTGACGGG TCCTTCGTGGATCCGCTCGCACAGATGATGCTGACTGGCGAAGACTTTCG GTGCTTCGCGGAAACAATCGTCGAGCTGGCGGAAAAGCACTGCAAGGGCC GGGCCGTCTTTATGCACGAGGGCGGCTACTCGGACGCCTACGTGCCATTC TGCGGGCTGGCGGTTACGGAAGCGCTGGCCGGCTGCCGGACGGCCGTGGA GGACCCGCTGCTGGCGGAGGCCAACGGCTTTGGTTACCAGGCGCTGCAGC CCTGGCAGGACGCCGTCATCGCCGCCGCCGAGGCGAACGTCAACGTGCTG CGCGGGATATTGGCGAGAGCGGATGGCGCGGTGGCATGAACCCCGACTAA AACTTTTTCCTTTTGTAAAGATGCAACGTTTAAACAGAATCGGACCAAAT TGACGATAGCATGAAGGGGTGGAAGAAAGATTCTTAATGCTGCTGAACGT GCGCCTTCTTCTGCTGTCCTTCGAGGCGCCGCTTCTTGCTGGCGCGGTCG TGCGTGCGCGGCTTCCTCTTCTTGCCGTCCCTCTCCCCCTCTTCGCCGCC GCTGCCCTCGTCCGTCCGGGCCCGCTTCTCTGCCTTGCGGGCAGCCTTCT TTTCCGCCTTTCCGGCCTTGGCCACATCGGCCTTTGTGGCTTTCCCTCCC TTTCCGACGCGGCTCTTGTCCGCCGCCTTTGTGACTTCCCCCCCGCCGCC GGCTCTTTCTTCCTTGCCGCCCTTGCCAACGCTCCCCTTATTACTGGCCA CGTGAACGTTGCTGCTGCCACCCCCGCGCACCGCGCCGTTGCTGTACGGC CGGACGGCGGCGTCGGCGGCGTTGGCACCGGCCCAGGGCGGCCGCTCGCC TCCCCCGCGGCCGCCGCCGCCACCTCGGCCGCCGCCACCGTCGCCACGGC CGCCGCCACGGCCGCCGCTGCTGCGACCGCCACGCCCATGGAAGCTGCCA CCGCCGCGGCCCAGCAGGGACGGCCGACCAGCCGTGAGCTCGACGGCGGC GAGTGACTCCTCGAAGCCCATGCCGCTGCAGCGGCCTCCGTCGTGGCCCC AGCACCCGCAGTTGCAGCACTGCGGGCCCTCCTCGCCCTCCGGCCCCAGC ACAGGCTCCGCCAGCGCCGCCAGCGCTTCCGCCGCCGCGTCGCACGCCAC GTGACCGACGGCGTCGCACGAAATGCACCGGCGCTTCGACGGCGAGCGCG ACTTGTCGCCACGGCAGTCCGGCGGGCGGTGGCCAGGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig125:7405..9943+

>mRNA_P-wetherbeei_contig125.5.1 ID=mRNA_P-wetherbeei_contig125.5.1|Name=mRNA_P-wetherbeei_contig125.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=888bp|location=Sequence derived from alignment at P-wetherbeei_contig125:7405..9943+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCATGGCCGGCGGTGGCGATGCAGGCGACGAGGCCCCCTTCAGCCA
TGGCGGCCATGAGATTGCGTTGCTGTCGGCCGGATCGGCCGTGGTCGCCG
TCGACGCCGTGATGGACGGGCGCTGCGACAACGCCTACGCGTTGGTCCGG
CCGCCGGGGCACCACGCCGTCGCCGTCATGGGGATGGGGTTTTGCCTCTA
CAACAACATCGTCATCGCGGCGCACCACGCGCTCCGGCATCACGGTGACA
CTGTAAGACGCGTGGCAATCGTCGACTACGACGTGCACCACGGCAACGGC
ACGCAGGACGCGTTTTACGACGACCCACGGGTGCTGTTCATCAGCCTGCA
CCAGGACGACAACTACCCGCGGCCATCAGGCAAGGTGGAAGAGACGGGCG
CAGGCGCCGGCACTGGCTACAATCTCAACGTGCCGCTGCCGCCGGGCAGC
GGCTCGGGCGCCTACCGCGCCACCTTCGACCGCATCGTCGCGCCGGCCGT
CGATGCTTTCCGACCGGACCTCCTCCTGGTGTCCAGCGGCTTTGACGGGT
CCTTCGTGGATCCGCTCGCACAGATGATGCTGACTGGCGAAGACTTTCGG
TGCTTCGCGGAAACAATCGTCGAGCTGGCGGAAAAGCACTGCAAGGGCCG
GGCCGTCTTTATGCACGAGGGCGGCTACTCGGACGCCTACGTGCCATTCT
GCGGGCTGGCGGTTACGGAAGCGCTGGCCGGCTGCCGGACGGCCGTGGAG
GACCCGCTGCTGGCGGAGGCCAACGGCTTTGGTTACCAGGCGCTGCAGCC
CTGGCAGGACGCCGTCATCGCCGCCGCCGAGGCGAACGTCAACGTGCTGC
GCGGGATATTGGCGAGAGCGGATGGCGCGGTGGCATGA
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