mRNA_P-wetherbeei_contig12441.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: A0A3S0EDI5_9HYPH (Response regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0EDI5_9HYPH) HSP 1 Score: 97.8 bits (242), Expect = 5.940e-24 Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 4 GIVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEFK 336 +VI+DDS ++L+VLK L+ + TFT AG+ +LA ++A LI+VD MP +DGI +S VR H TPIIMVT+ + D+ ++A+ AG + F+ KP+N E+K Sbjct: 2 AVVIIDDSLSSLVVLKHLSAAAQTGRIETFTDPRAGLAYLAEHSAELIIVDFVMPHVDGITLVSAVRGNPRHVATPIIMVTQSSEEDLHERAVAAGVDNFMPKPVNLQEYK 112
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: A0A3S0FKB6_9HYPH (Response regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0FKB6_9HYPH) HSP 1 Score: 93.6 bits (231), Expect = 4.800e-22 Identity = 53/111 (47.75%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 4 GIVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEFK 336 IVIVDDSAT LIVLK +A E V+ F+ A + FLA A +I+ D MP+MDGIQF VR H A TPI+MVT T ++ A AG F+ KP+N+ FK Sbjct: 31 AIVIVDDSATALIVLKSVAAQRREREVVPFSKASDALAFLADKPADVIVSDYSMPEMDGIQFTRAVREFAHLAATPIVMVTAATEPEVTSNARAAGVTHFMHKPINALFFK 141
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: A0A133XNQ5_9RHOO (Transcriptional regulator n=2 Tax=Dechloromonas TaxID=73029 RepID=A0A133XNQ5_9RHOO) HSP 1 Score: 90.1 bits (222), Expect = 3.850e-19 Identity = 44/109 (40.37%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 7 IVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEF 333 ++I+DDS NL ++K L E + F + L +E+ N L++VD MPDMDG++FIS R+ PI+MVT + D+R +AL+ GAN+FL+KP++ EF Sbjct: 4 VLIIDDSDINLTLIKALVMKLGECEAVLFANPLKALEWCRSNVPDLVIVDYMMPDMDGLKFISAFRALHGRDEVPILMVTANDQKDVRYEALLGGANDFLTKPIDRIEF 112
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: UPI00193B1C4B (response regulator n=1 Tax=Azospira restricta TaxID=404405 RepID=UPI00193B1C4B) HSP 1 Score: 88.2 bits (217), Expect = 1.990e-18 Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 7 IVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEFK 336 I IVDDS NL +LK L + L F+ + G+ + AGN LI+VD MP++DGI FI +R+ H PI+M+T + ++R +AL GA +FL+KP+++AEF+ Sbjct: 4 IAIVDDSEINLTLLKHLVLKLGDCEPLLFSDSPQGLAWCAGNDPDLIIVDYMMPELDGISFIERLRAVPGHEELPILMITANDDKEVRYEALARGATDFLTKPVDTAEFR 113
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: Q47BZ9_DECAR (Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain n=8 Tax=Betaproteobacteria TaxID=28216 RepID=Q47BZ9_DECAR) HSP 1 Score: 86.3 bits (212), Expect = 1.020e-17 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 4 GIVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEF 333 ++IVDDS NL ++K L + + F + L+ +E+ N L++VD MPDMDG++FIS R+ P++M+T + D+R AL+ GAN+FL+KP++ EF Sbjct: 3 SVLIVDDSDINLTLIKALVLKLGDCSPILFDNPLSALEWCRENVPDLVIVDYMMPDMDGLRFISAFRALHGRDEIPVLMITANDQKDVRYDALLGGANDFLTKPIDRIEF 112
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: A0A4Y4D282_ZOORA (Two-component system response regulator n=2 Tax=Bacteria TaxID=2 RepID=A0A4Y4D282_ZOORA) HSP 1 Score: 85.9 bits (211), Expect = 1.370e-17 Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 4 GIVIVDDSATNLIVLKRLAQ--TTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEF 333 I IVDD+ NL +++ L + T E ++TF+ L G+++ A N L++VD MPD++GI FI T+R + PI+MVT ++R + L AGAN+FL+KP++ EF Sbjct: 2 AIAIVDDTPLNLTLIQALVRKLTPPETEIVTFSQPLEGLQWCASNEPDLLIVDYMMPDINGIDFIRTLRKLYPADSVPILMVTAAHEKEVRYECLRAGANDFLTKPIDRNEF 113
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: UPI001CFC3C91 (response regulator n=2 Tax=Quatrionicoccus australiensis TaxID=138118 RepID=UPI001CFC3C91) HSP 1 Score: 85.9 bits (211), Expect = 1.420e-17 Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 7 IVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEF 333 ++I+DDS NL +++ L E + F + L +++ N L++VD MPDMDG++FIS R+ PI+MVT + D+R +AL+ GAN+FL+KP++ EF Sbjct: 4 VLIIDDSDINLTLIRALVMKLGECSPVLFENPLKALDWCRENVPDLVIVDYMMPDMDGLRFISAFRALHGRDEVPILMVTANDQRDVRYEALLGGANDFLTKPIDRVEF 112
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: UPI00040F9E35 (response regulator n=1 Tax=Azonexus hydrophilus TaxID=418702 RepID=UPI00040F9E35) HSP 1 Score: 85.9 bits (211), Expect = 1.420e-17 Identity = 40/109 (36.70%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 7 IVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEF 333 ++I+DDS NL +++ L E + F L +E+ GN L++VD MP+MDG++FI+ R+ P++M+T + D+R +AL+ GAN+FL+KP++ EF Sbjct: 4 VLIIDDSEINLTLIRALVLKLGECEPVMFDHPLKALEWCRGNVPDLVIVDYMMPEMDGLRFIAAFRALHGRTEIPVLMITANDQKDVRYEALLGGANDFLTKPIDRIEF 112
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: UPI0012916A42 (response regulator n=1 Tax=Zoogloea sp. 1C4 TaxID=2570190 RepID=UPI0012916A42) HSP 1 Score: 85.5 bits (210), Expect = 1.900e-17 Identity = 44/112 (39.29%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 4 GIVIVDDSATNLIVLKRLAQ--TTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEF 333 I IVDD+ NL +++ L + T ++TF+S L G+++ + L++VD MPD++GI+FI TVR + PI+MVT ++R ++L AGAN+FL+KP++ EF Sbjct: 2 AIAIVDDTPLNLTLIQALVRKLTPPGTEIVTFSSPLEGLQWCGSHEPDLVIVDYMMPDLNGIEFIETVRKLYPADTVPILMVTAAHEKEVRYESLAAGANDFLTKPIDRHEF 113
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Match: A0A6C2D5Y7_9RHOO (Response regulator n=1 Tax=Zoogloea oleivorans TaxID=1552750 RepID=A0A6C2D5Y7_9RHOO) HSP 1 Score: 85.5 bits (210), Expect = 1.910e-17 Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 4 GIVIVDDSATNLIVLKRLAQ--TTCEVPVLTFTSALAGIEFLAGNAASLILVDCEMPDMDGIQFISTVRSQWHHAVTPIIMVTRHTASDIRQKALMAGANEFLSKPLNSAEF 333 I IVDD+ NL +++ L + T ++ FTS L G+++ + + L++VD MPD++GI+FIS VR V PI+MVT ++R + L AGAN+FL+KP++ EF Sbjct: 2 AIAIVDDTPINLTLIQALVRKLTPAGTEIVCFTSPLEGLQWCSDHEPDLVIVDYMMPDLNGIEFISAVRKLHSADVVPILMVTAAHEKEVRYQCLTAGANDFLTKPIDRHEF 113 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12441.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12441.1.1 >prot_P-wetherbeei_contig12441.1.1 ID=prot_P-wetherbeei_contig12441.1.1|Name=mRNA_P-wetherbeei_contig12441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp VGIVIVDDSATNLIVLKRLAQTTCEVPVLTFTSALAGIEFLAGNAASLILback to top mRNA from alignment at P-wetherbeei_contig12441:1394..1729+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12441.1.1 ID=mRNA_P-wetherbeei_contig12441.1.1|Name=mRNA_P-wetherbeei_contig12441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig12441:1394..1729+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12441:1394..1729+ >mRNA_P-wetherbeei_contig12441.1.1 ID=mRNA_P-wetherbeei_contig12441.1.1|Name=mRNA_P-wetherbeei_contig12441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig12441:1394..1729+ (Phaeothamnion wetherbeei SAG_119_79)back to top |