mRNA_P-wetherbeei_contig12438.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12438.1.1
Unique NamemRNA_P-wetherbeei_contig12438.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: H3GJC3_PHYRM (Uncharacterized protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3GJC3_PHYRM)

HSP 1 Score: 86.3 bits (212), Expect = 7.940e-18
Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 1 
Query:   10 RLLNRDVDLMFEGVDK-NTLCGTVLHPVG-NIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPPQIQ 255
            RLL+RDV+L  EGVDK   L G+V+HP G NI+VE+L+ GLGRM+D++S   S +  A+MRTAE  AKQQ+LRVWR +  P +Q
Sbjct:  248 RLLHRDVELKLEGVDKYGNLFGSVVHPSGRNISVELLKNGLGRMADWSSSFTSASARASMRTAEKEAKQQKLRVWREYQAPVLQ 331
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: A0A7S3BYD6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BYD6_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 1.480e-17
Identity = 42/84 (50.00%), Postives = 63/84 (75.00%), Query Frame = 1 
Query:    4 QSRLLNRDVDLMFEGVDKN-TLCGTVLHPVGNIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPPQI 252
            +SRLLNRDV +  EGVDKN +L GT +HP GN+++E+++ GL R++D++S  C   +A A+R AE  AK++RLR+WR + PP +
Sbjct:  229 ESRLLNRDVQVKLEGVDKNGSLLGTAMHPQGNMSIELVKLGLARVADWSSHVCD--HAPALRAAERAAKEKRLRLWRDYVPPNM 310
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: A0A484E3N6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3N6_BRELC)

HSP 1 Score: 85.1 bits (209), Expect = 2.060e-17
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1 
Query:   10 RLLNRDVDLMFEGVDK-NTLCGTVLHPVG-NIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPPQIQ 255
            RLL+RDV+L FEGVDK   L G+V+HP G NI+VE+L+ GLGRM+D++S   S +  A MR AE  AKQQ++RVWR +  P +Q
Sbjct:  236 RLLHRDVELKFEGVDKFGNLFGSVVHPSGRNISVELLQNGLGRMADWSSAFTSASVRATMRNAEKEAKQQKVRVWREYEAPVLQ 319
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: M4C3N0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3N0_HYAAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.770e-17
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:   10 RLLNRDVDLMFEGVDKN-TLCGTVLHPVG-NIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPPQI 252
            RLL+RDV+L  EG DK+  L G+++HP G NI+VE+L+ GL RM+D++S   S  + AAMRTAE  AKQQ+LRVWR +  P +
Sbjct:  251 RLLHRDVELKLEGADKHGNLLGSIVHPSGHNISVELLKNGLARMADWSSSFTSAVDRAAMRTAEKSAKQQKLRVWRNYEAPTL 333
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: R4WE27_RIPPE (Staphylococcal nuclease domain-containing protein n=1 Tax=Riptortus pedestris TaxID=329032 RepID=R4WE27_RIPPE)

HSP 1 Score: 84.0 bits (206), Expect = 5.140e-17
Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 1 
Query:    4 QSRLLNRDVDLMFEGVDKNTLCGTVLHPVGNIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPP 246
            ++RLL +DV+++ E V+ N   GTVLHP GNIA E+L+ G     D++     +A+A  +R AE LAK++RLR+W+ WTPP
Sbjct:  254 EARLLQQDVEIVLESVNNNNFVGTVLHPKGNIAEELLKNGYAHCVDWSIAMMKKADADKLRQAEKLAKEKRLRIWKDWTPP 334
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: A0A7S2GFY6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GFY6_9EUKA)

HSP 1 Score: 83.2 bits (204), Expect = 9.580e-17
Identity = 41/82 (50.00%), Postives = 61/82 (74.39%), Query Frame = 1 
Query:    4 QSRLLNRDVDLMFEGVDKN-TLCGTVLHPVGNIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPP 246
            ++RLLNRDV +  EGVDKN  L GTVLHP GN+++E+++ GL R+ D+++  C   +A A+R AE  AK++RLR+W+ + PP
Sbjct:  222 ETRLLNRDVKVSLEGVDKNGNLLGTVLHPAGNMSIELVKVGLARVVDWSTQVCP--HAPALRAAERSAKEKRLRIWKDYVPP 301
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: A0A2R7W1Y4_ONCFA (Uncharacterized protein n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7W1Y4_ONCFA)

HSP 1 Score: 80.5 bits (197), Expect = 7.550e-16
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 1 
Query:    4 QSRLLNRDVDLMFEGVDKNTLCGTVLHPVGNIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPP 246
            ++RLL  DV+++ E    N   GTV+HP GNIA E+L+ G     D++     +A+A  +R AE +AK++RLRVW+ WTPP
Sbjct:  255 EARLLQHDVEIVLESASNNNFVGTVIHPKGNIAEELLKNGYAHCVDWSIAMMKKADADKLRQAEKIAKEKRLRVWKDWTPP 335
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: UPI0006D4DF07 (staphylococcal nuclease domain-containing protein 1 n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4DF07)

HSP 1 Score: 80.5 bits (197), Expect = 8.490e-16
Identity = 33/83 (39.76%), Postives = 58/83 (69.88%), Query Frame = 1 
Query:    4 QSRLLNRDVDLMFEGVDKNTLCGTVLHPVGNIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPPQI 252
            ++RLL++DV+++ + ++ N   GT++HP GNIA E+L+ G     D++     +A+A  +R AE +AK++RLR+W+ WTPP +
Sbjct:  255 ETRLLHQDVEIVLDSINNNNFVGTIIHPKGNIAEELLKVGYAHCVDWSISKMKKADADKLRQAEKMAKEKRLRIWKDWTPPPV 337
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: A0A662XB56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB56_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.130e-15
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 1 
Query:    4 QSRLLNRDVDLMFEGVDK-NTLCGTVLHPVG-NIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPP 246
            + RLL+RDV+L  EGVDK   L G+V+HP G NI+VE+L+ GLG+M+D++S   S +  A+MR AE  AKQ +LRVWR +  P
Sbjct:  251 EMRLLHRDVELKLEGVDKYGNLFGSVVHPSGRNISVELLKNGLGKMADWSSSFTSASARASMRAAEKEAKQNKLRVWREYQAP 333
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BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Match: A0A0M0JZ25_9EUKA (Nuclease domain-containing protein 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZ25_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 1.580e-15
Identity = 38/82 (46.34%), Postives = 61/82 (74.39%), Query Frame = 1 
Query:    4 QSRLLNRDVDLMFEGVDKN-TLCGTVLHPVGNIAVEVLRQGLGRMSDFTSVHCSRANAAAMRTAETLAKQQRLRVWRTWTPP 246
            ++RLL+RDV +  EG+DKN  L GTV+HP GN+++E+++ GL R+ D+++  C   +A A+R AE  AK++RLR+W+ + PP
Sbjct:  228 ETRLLHRDVQVSLEGMDKNGNLLGTVIHPAGNVSIELVKVGLARVVDWSAQVCP--HAPALRQAERTAKEKRLRMWKDYVPP 307
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12438.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GJC3_PHYRM7.940e-1857.14Uncharacterized protein n=19 Tax=Peronosporaceae T... [more]
A0A7S3BYD6_9EUKA1.480e-1750.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A484E3N6_BRELC2.060e-1755.95Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
M4C3N0_HYAAE3.770e-1754.22Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
R4WE27_RIPPE5.140e-1746.91Staphylococcal nuclease domain-containing protein ... [more]
A0A7S2GFY6_9EUKA9.580e-1750.00Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A2R7W1Y4_ONCFA7.550e-1644.44Uncharacterized protein n=1 Tax=Oncopeltus fasciat... [more]
UPI0006D4DF078.490e-1639.76staphylococcal nuclease domain-containing protein ... [more]
A0A662XB56_9STRA1.130e-1553.01Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A0M0JZ25_9EUKA1.580e-1546.34Nuclease domain-containing protein 1 n=1 Tax=Chrys... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12438contigP-wetherbeei_contig12438:91..345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LGL1
PFAMsSNase,TUDOR
Model size255
Max annot lvl2759|Eukaryota
KEGG koko:K15979
KEGG Pathwayko05169,ko05203,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000932,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005829,GO:0005886,GO:0005911,GO:0006082,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006629,GO:0006720,GO:0006721,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009266,GO:0009408,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009685,GO:0009686,GO:0009791,GO:0009845,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010371,GO:0010372,GO:0010467,GO:0010468,GO:0010494,GO:0010565,GO:0010605,GO:0010629,GO:0010817,GO:0012505,GO:0016020,GO:0016053,GO:0016070,GO:0016071,GO:0016101,GO:0016102,GO:0016114,GO:0016787,GO:0016788,GO:0019216,GO:0019222,GO:0019439,GO:0019747,GO:0019752,GO:0030054,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031967,GO:0031975,GO:0032350,GO:0032352,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034605,GO:0034641,GO:0034655,GO:0035770,GO:0036464,GO:0042221,GO:0042445,GO:0042446,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043436,GO:0043455,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045828,GO:0045834,GO:0046394,GO:0046483,GO:0046686,GO:0046700,GO:0046885,GO:0046886,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055044,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0090305,GO:0090351,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576,GO:1990904
Exons1
Evalue5.79e-20
EggNOG OGsCOG1525@1|root,KOG2039@2759|Eukaryota
Descriptiongamete generation
Cds size255
COG categoryL
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185948.8036225-CDS-P-wetherbeei_contig12438:90..3451683185948.8036225-CDS-P-wetherbeei_contig12438:90..345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12438 91..345 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12438.1.1prot_P-wetherbeei_contig12438.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12438 91..345 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12438.1.1

>prot_P-wetherbeei_contig12438.1.1 ID=prot_P-wetherbeei_contig12438.1.1|Name=mRNA_P-wetherbeei_contig12438.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp
NQSRLLNRDVDLMFEGVDKNTLCGTVLHPVGNIAVEVLRQGLGRMSDFTS
VHCSRANAAAMRTAETLAKQQRLRVWRTWTPPQIQ
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mRNA from alignment at P-wetherbeei_contig12438:91..345+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12438.1.1 ID=mRNA_P-wetherbeei_contig12438.1.1|Name=mRNA_P-wetherbeei_contig12438.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig12438:91..345+ (Phaeothamnion wetherbeei SAG_119_79)
AACCAGTCGCGGCTGCTGAACCGCGACGTGGATCTGATGTTCGAGGGCGT
GGACAAGAACACACTGTGCGGCACGGTGCTGCACCCGGTGGGCAACATTG
CGGTGGAGGTGCTCCGGCAAGGCCTTGGACGTATGTCGGACTTCACGTCG
GTGCACTGCTCGCGCGCCAACGCCGCGGCGATGCGGACGGCGGAGACGCT
GGCCAAGCAGCAGCGGCTGCGCGTCTGGCGCACGTGGACCCCGCCCCAGA
TCCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12438:91..345+

>mRNA_P-wetherbeei_contig12438.1.1 ID=mRNA_P-wetherbeei_contig12438.1.1|Name=mRNA_P-wetherbeei_contig12438.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig12438:91..345+ (Phaeothamnion wetherbeei SAG_119_79)
AACCAGTCGCGGCTGCTGAACCGCGACGTGGATCTGATGTTCGAGGGCGT
GGACAAGAACACACTGTGCGGCACGGTGCTGCACCCGGTGGGCAACATTG
CGGTGGAGGTGCTCCGGCAAGGCCTTGGACGTATGTCGGACTTCACGTCG
GTGCACTGCTCGCGCGCCAACGCCGCGGCGATGCGGACGGCGGAGACGCT
GGCCAAGCAGCAGCGGCTGCGCGTCTGGCGCACGTGGACCCCGCCCCAGA
TCCAG
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