mRNA_P-wetherbeei_contig12433.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A7C5XTN0_9GAMM (PIN domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XTN0_9GAMM) HSP 1 Score: 126 bits (316), Expect = 8.620e-34 Identity = 69/125 (55.20%), Postives = 83/125 (66.40%), Query Frame = 3 Query: 246 MIVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 M LDASAL+AFL E G ERV L G+CMS +N EVL+RFA+DG D + +R S +E+VPF A+ A AA L LGLS GDRACLALA R + ALTADR W L++G+EI CIR Sbjct: 1 MTALDASALLAFLFREPGHERVAPHLSGACMSTVNLGEVLTRFARDGHDPALVLARLRESPLELVPFLAEHAALAAALEPRVRRLGLSFGDRACLALALARRVPALTADRAWLALDLGVEIRCIR 125
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A1V5L7M6_9ACTN (tRNA(fMet)-specific endonuclease VapC n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A1V5L7M6_9ACTN) HSP 1 Score: 126 bits (316), Expect = 8.620e-34 Identity = 66/125 (52.80%), Postives = 88/125 (70.40%), Query Frame = 3 Query: 246 MIVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 MI LDASAL+AFL E G E V +L+ SC+S++N +EVL RFA+DG D + + + +RRS +E+VPF A++A A L T LGLSLGDRACLALA RG+ A+TAD W L+VG+ + +R Sbjct: 1 MIALDASALLAFLFREPGHEMVAQKLEESCISSVNLAEVLGRFARDGHDPRMVFEHLRRSPLEMVPFLAEDAALVAALAPRTRTLGLSLGDRACLALAATRGIPAVTADSAWLSLDVGVRVHLVR 125
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A7Z9Y1K2_9CHLR (PIN domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Z9Y1K2_9CHLR) HSP 1 Score: 121 bits (303), Expect = 7.850e-32 Identity = 65/125 (52.00%), Postives = 81/125 (64.80%), Query Frame = 3 Query: 246 MIVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 MI LDASAL+AFL E G E V + C+S +N SEV+ RFA+DG D Q Q I + IEIVPF+A A A L T LGL L DRACLALA +R + ALTAD++W + +VG+E+ IR Sbjct: 1 MIALDASALLAFLFRETGHEEVASHIDDCCLSTVNLSEVIGRFARDGHDAQVALQKITATNIEIVPFSASHAALTAAFLPQTRALGLPLTDRACLALALSRNIPALTADQVWQQTDVGVEVILIR 125
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A849UZ77_9GAMM (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Methyloglobulus sp. TaxID=2518622 RepID=A0A849UZ77_9GAMM) HSP 1 Score: 117 bits (293), Expect = 3.370e-30 Identity = 63/124 (50.81%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 246 MIVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECI 617 MIVLDASAL+A+L E G E V ++ +C+S +N SEV+ RF +DG+D+ L Q + ++ IEIVPF + AL AAEL+ T GL LGDRACL LA R L LTAD +W +E G+++E I Sbjct: 1 MIVLDASALLAYLFRETGHEIVEQYIEDACISTVNLSEVVGRFIRDGIDVTPLIQHLEKTSIEIVPFNQEHALHAAELIPLTKPYGLLLGDRACLGLASTRNLAILTADVVWAEIE-GLDLEII 123
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: W0DQ04_9GAMM (Twitching motility protein PilT n=3 Tax=Thioalkalivibrio TaxID=106633 RepID=W0DQ04_9GAMM) HSP 1 Score: 117 bits (292), Expect = 3.660e-30 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 249 IVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 +VLDASAL+AFL DE G E+V L+G+ +S +N+SE+L + + GVD+ +GQ G+ PF +++A TAA L T + GLSL RACLALA ++GL +TADR W RL +GIEI +R Sbjct: 3 VVLDASALLAFLHDEPGGEKVSPALEGARVSVVNWSELLQKSLRQGVDVAGMGQEFTEVGVRFEPFTSQQAETAAWLWSHTRNHGLSLAGRACLALAMDKGLPVITADRAWARLNLGIEIRVLR 126
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A6P2D1U4_9BACT (PINc domain-containing protein n=1 Tax=Gemmata massiliana TaxID=1210884 RepID=A0A6P2D1U4_9BACT) HSP 1 Score: 115 bits (289), Expect = 1.060e-29 Identity = 61/124 (49.19%), Postives = 80/124 (64.52%), Query Frame = 3 Query: 249 IVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 + LDASAL+AFL DE G V L + +S++NY E L+R G + + R +E+VPF ++ A A L T HLGLSLGDRACLALA RGL ALTAD++WTRL++G+ + CIR Sbjct: 4 VALDASALLAFLFDEPGAGAVAPLLSRAALSSVNYCETLTRLVARGKPLADSVSALARLRLEVVPFDSELAAVTASLREPTKHLGLSLGDRACLALALARGLPALTADQLWTRLDIGVRVNCIR 127
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A1R4H2D3_9GAMM (PilT protein domain protein n=1 Tax=Crenothrix polyspora TaxID=360316 RepID=A0A1R4H2D3_9GAMM) HSP 1 Score: 114 bits (285), Expect = 4.130e-29 Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 246 MIVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLE-VGIEIECIR 620 MIVLDASAL+A+L E G + V ++ +C+S +N SEV RF++DG+D+ + Q I ++ IEI+PF AL AA+ + T H GLSLGDRACL LA + L LTAD W+ +E + I+I IR Sbjct: 1 MIVLDASALLAYLFRESGHDIVEKYIENACISTVNLSEVAGRFSRDGIDVTPIIQHIEKTSIEIIPFTQIHALYAADFIPKTKHYGLSLGDRACLGLATAKNLAVLTADAAWSEIEDISIKIIQIR 126
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A7V9FK76_9ACTN (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9FK76_9ACTN) HSP 1 Score: 113 bits (282), Expect = 1.040e-28 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 255 LDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 +DASAL+A L E G E + L+ + +S +N+SEV R+ GVD+ L + G+EIVP ++A AAEL T LGLSLGDRACLALA+ GL ALTADR W L+VG+E++ IR Sbjct: 1 MDASALLALLHSEPGAEVAEEALEQAAISTVNWSEVYQRWVTRGVDVAGLRADVEALGLEIVPLTVEDAEQAAELWSRTRQLGLSLGDRACLALARRLGLPALTADRAWLDLDVGVEVQAIR 122
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: UPI00053BED02 (type II toxin-antitoxin system VapC family toxin n=1 Tax=Sphingomonas sp. 35-24ZXX TaxID=1545915 RepID=UPI00053BED02) HSP 1 Score: 113 bits (282), Expect = 1.170e-28 Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 252 VLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 VLDAS ++A + +E G V + L S MS++NYSEVL+R + G++ +L + I R GI+IVPF+ EA A L T H GLS DRACLALAQ RG+ ALTADR W L VG++I+ IR Sbjct: 4 VLDASVVLAVIFEEPGGNDVAELLSDSVMSSVNYSEVLTRCLERGMESASLERQIARLGIDIVPFSVAEARLGAALRQPTRHRGLSFADRACLALAQLRGMPALTADRQWQGLGVGVDIQLIR 126
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Match: A0A3A0AVQ2_9CHLR (PINc domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0AVQ2_9CHLR) HSP 1 Score: 112 bits (280), Expect = 2.260e-28 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 3 Query: 246 MIVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIQALGQMIRRSGIEIVPFAAKEALTAAELLISTAHLGLSLGDRACLALAQNRGLHALTADRIWTRLEVGIEIECIR 620 MIVLDASAL+ L E G E V C+S +N +EV+SRF +DG Q + Q ++ + IE VPF+ ++A+ A+ LL T GLSL DRAC+ALA RG ALTADR W++++VG+ I IR Sbjct: 1 MIVLDASALLTLLYQEPGHEVVSAHFPDCCISTVNLTEVVSRFVRDGHASQPVWQKLKATSIEFVPFSVEQAILASHLLSRTQPYGLSLADRACIALALLRGAPALTADRAWSQVQVGVTICTIR 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12433.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12433.1.1 >prot_P-wetherbeei_contig12433.1.1 ID=prot_P-wetherbeei_contig12433.1.1|Name=mRNA_P-wetherbeei_contig12433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp MIVLDASALIAFLLDEVGKERVRDRLKGSCMSALNYSEVLSRFAKDGVDIback to top mRNA from alignment at P-wetherbeei_contig12433:550..1172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12433.1.1 ID=mRNA_P-wetherbeei_contig12433.1.1|Name=mRNA_P-wetherbeei_contig12433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=623bp|location=Sequence derived from alignment at P-wetherbeei_contig12433:550..1172+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12433:550..1172+ >mRNA_P-wetherbeei_contig12433.1.1 ID=mRNA_P-wetherbeei_contig12433.1.1|Name=mRNA_P-wetherbeei_contig12433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig12433:550..1172+ (Phaeothamnion wetherbeei SAG_119_79)back to top |