mRNA_P-wetherbeei_contig12428.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A6H5L227_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L227_9PHAE) HSP 1 Score: 158 bits (400), Expect = 5.050e-44 Identity = 98/193 (50.78%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 1 VRTRLQ--SSPYVFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGALRRRGHGDSTAGVFACGALSGGANAFVVTPVELVRNRLMVQCGG-PSGDGGGGKAKLASF-----------EYRSPVDCVRRVAAKDGVAALWR---GITPTILRDAPGMGVYFVTFDRVKAWLT-RPTGSS 525
VRTRLQ S GV +C+ T R+EG AFYKGMAFPLAAQ V+KAVIF+ NG AR AL RRG DS AGV+ACGAL GG N+F+VTPVELVR RLM+Q G P+ G R P+DCVR+V ++GV +W+ G+ T+ RD+ GMG +F+ FD VK L R GSS
Sbjct: 37 VRTRLQMAGSQGKTLGVRSCVANTFRNEGIRAFYKGMAFPLAAQVVFKAVIFTTNGIARRALDRRGLADSPAGVYACGALGGGVNSFIVTPVELVRTRLMLQHGRKPASSATAGXXXXXXXXXXXXXXXXDGRLRGPLDCVRQVVRRNGVFGMWQAMPGLRVTLTRDSLGMGAFFLAFDTVKKALAERRYGSS 229
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A8K1FHD6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHD6_PYTOL) HSP 1 Score: 128 bits (321), Expect = 6.070e-33 Identity = 75/173 (43.35%), Postives = 100/173 (57.80%), Query Frame = 1
Query: 1 VRTRLQSSPYVFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGALRRRG-----HGDSTAGVFACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWL 504
+RTRLQ SP FRG +C T+R E +A YKG P +QAVYK+VIF+ + T R + R + + A GA++GG NA +VTPVELVRNRL VQ + +S YR C+ V ++G+AALWRG+T T+LRDA G+ VYF+ +D K L
Sbjct: 35 IRTRLQISPQRFRGFFDCASQTIRRESAMALYKGFLPPFFSQAVYKSVIFTTSSTLRNDIFPRSQLLQPYLTPSVVSLASGAIAGGLNAVIVTPVELVRNRLQVQY----------EHVRSSHRYRGAFHCLSSVVRQEGMAALWRGLTTTVLRDALGVSVYFLGYDFAKQQL 197
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A2R5GWR7_9STRA (Carrier protein YMC2, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWR7_9STRA) HSP 1 Score: 126 bits (317), Expect = 9.940e-33 Identity = 80/168 (47.62%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 34 FRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGAL-----RRRG-HGDSTAGVFACGALSGGANAFVVTPVELVRNRLMVQCG-GPSGDGGGGKAKLASFEYRSPVDCVRRVAAKD--GVAALWRGITPTILRDAPGMGVYFVTFDRVKAWLTR 510
+RG ++C+ T+R EG A YKG++ PL AQAVYKAV+F G A L R G H A F CG+ +G NAFVV PVELVR RLMVQ PSG GG YR DC+R+ + G AALWRG+T TILRD PG+G++F +F+ K LT+
Sbjct: 5 YRGPLDCLQQTVRHEGVSALYKGLSGPLMAQAVYKAVMFGGFGYASRQLDLATYREAGAHDQVLARAFLCGSFAGTLNAFVVCPVELVRTRLMVQQEWSPSGQRGG-------VVYRGAWDCIRQTVTTEAGGPAALWRGLTSTILRDGPGVGMWFGSFEATKLILTK 165
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: L8GM32_ACACA (Carrier superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GM32_ACACA) HSP 1 Score: 127 bits (320), Expect = 1.110e-32 Identity = 77/185 (41.62%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 VRTRLQSSPYV-FRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGAL---RRRGHGDS-----TAGVFACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWLTRPTGSSS 528
VRTRLQ++ F GV++C T++ EG LA YKGM+ PLAAQA+ KA++F G A+ + R RG S T + CG +G N V P+ELVRNRLM Q + G A A+F Y P+DC +++ + G+ LWRG+ PT+LRD PG+G ++ +F+ VK L P G ++
Sbjct: 41 VRTRLQTTDASRFNGVIDCFAKTVKGEGFLALYKGMSSPLAAQALQKAIMFGAYGAAQRFIVGGRDRGTTSSPQPLSTFELLLCGMFAGSVNTVVAAPIELVRNRLMTQYHAKAASG----AADATF-YTGPIDCCKKIVQQHGLRGLWRGVGPTLLRDGPGVGAWYASFEFVKRLLI-PEGKTA 219
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A7S3ZRV2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRV2_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.500e-31 Identity = 76/177 (42.94%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 1 VRTRLQSSPY-VFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGALRRRGHGDSTAG--VFACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWLTRPTGS 522
VRTRLQ++P +RG +C T+R EGPLA YKG+A+PLAAQ +YKAV+F + G A ALR A VFA G ++GGANA V+ PVELVRNR V G R+ + V R AA G ++RG+ T+LRD PG+G Y+ F+ ++ GS
Sbjct: 30 VRTRLQAAPAGAYRGAWHCARVTVRREGPLALYKGLAWPLAAQGLYKAVMFGVYGAASRALRGGDPARPLAAHEVFAAGGVAGGANALVLAPVELVRNRFQVAAG------------------RTTLRAVLREAAAAG--GVYRGLGATLLRDVPGVGAYYAAFEAMRRRAVALRGS 186
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A7S4E647_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E647_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.900e-30 Identity = 76/177 (42.94%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 1 VRTRLQSSPY-VFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGALRRRGHGDSTAG--VFACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWLTRPTGS 522
VRTRLQ++P +RG +C T+R EGPLA YKG+A+PLAAQ +YKAV+F + G A ALR A VFA G ++GGANA V+ PVELVRNR V G R+ + V R AA G ++RG+ T+LRD PG+G Y+ F+ ++ GS
Sbjct: 30 VRTRLQAAPAGAYRGAWHCARVTVRREGPLALYKGLAWPLAAQGLYKAVMFGVYGAASRALRGGDPARPLAAHEVFAAGGVAGGANALVLAPVELVRNRFQVAAG------------------RTTLRAVLREAAAAG--GVYRGLGATLLRDVPGVGAYYAAFEAMRRRAVALRGS 186
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: K3XCD0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XCD0_GLOUD) HSP 1 Score: 120 bits (301), Expect = 5.650e-30 Identity = 70/175 (40.00%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 1 VRTRLQSSPYVFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARG-----ALRRRGHGDSTAGVFACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWLTR 510
+RTRLQ SP F G +C T++ E + YKG P +QAVYK+VIF+ + R A + + A GA++GG NAF+VTPVELVRNRL VQ +++ AS YR DC+R+V ++G ALWRG+ T++RD+ G+ YF+ ++ +A L R
Sbjct: 35 IRTRLQISPARFHGFFDCARQTIQKETAMGLYKGFLPPFFSQAVYKSVIFTTSSKIRNDLLPCATLLQPYLTPMAVPLISGAIAGGLNAFLVTPVELVRNRLQVQY----------ESQRASRSYRGAYDCIRQVVQREGGLALWRGLPTTVVRDSLGVACYFLGYEFARARLAR 199
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A6U3AS15_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3AS15_9EUKA) HSP 1 Score: 118 bits (295), Expect = 3.310e-29 Identity = 70/180 (38.89%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 1 VRTRLQS---SPYVFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGALRRRGHGDSTAGVFACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWLTRPTGSSSS 531
+RTR+Q+ S +RG ++C TL+ EG AFYKG+ FPL AQAVYK+VIF+ + + V CGA +GG N+FVVTPVEL+RN LMVQ K +R+ ++ V+ + ++G+ LWRGI PT LRD+ G+ +F +F+ +L G S +
Sbjct: 31 IRTRVQTADVSGVQYRGAIDCAAKTLKYEGLQAFYKGITFPLLAQAVYKSVIFTSYHAMQSLFPQTDGPPPIPRVMLCGAAAGGINSFVVTPVELIRNNLMVQY----------DHKTEPRRWRNSMELVKDLTKRNGITGLWRGIGPTFLRDSIGVASWFGSFEVCLRYLCPHIGLSGT 200
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A024U8N0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8N0_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.920e-29 Identity = 75/172 (43.60%), Postives = 100/172 (58.14%), Query Frame = 1
Query: 1 VRTRLQ-SSPYVFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGALRRRGHGDSTAGVF---ACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWL 504
+RTRLQ SS F V+ TLR EG YKG P +QAVYK+VIFS+ G AR + H D + +F GA++GG NAF+V PVELVRNRL +Q + A+ +Y+ +D +R+V +G ALW+G++ TI RDA G+ YFVTFD +K L
Sbjct: 36 IRTRLQHSSSSSFSTVVG---TTLRHEGLRGLYKGFFPPFFSQAVYKSVIFSVQGRARSFMST--HMDRPSPLFLSTCAGAIAGGINAFLVAPVELVRNRLQIQ-----------QQDTANAKYKGSIDVIRQVTKHEGPMALWKGLSCTITRDALGVAFYFVTFDCIKTVL 191
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Match: A0A7S2TIU0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TIU0_9EUKA) HSP 1 Score: 117 bits (292), Expect = 1.060e-28 Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 1 VRTRLQS---SPYVFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFSINGTARGALRRRGHGDSTAGVFACGALSGGANAFVVTPVELVRNRLMVQCGGPSGDGGGGKAKLASFEYRSPVDCVRRVAAKDGVAALWRGITPTILRDAPGMGVYFVTFDRVKAWLTRPTGSSSS 531
+RTR+Q+ S +RG ++C + T++ EG AFYKG+ FPL AQAVYK+VIF+ + + V CGA++GG N+FVVTPVEL+RN LMVQ K+ R+ V+ + + ++G+ LWRGI PT LRD G+ +F +F+ +L G S +
Sbjct: 37 IRTRVQTADVSGVRYRGALDCAVKTMKHEGFQAFYKGITFPLLAQAVYKSVIFTSYQAMQSLFPQIEGPPPIPRVMFCGAVAGGINSFVVTPVELIRNNLMVQY----------DHKMEGRRLRNSVELMTDLVKRNGITGLWRGIGPTFLRDGIGVASWFGSFEMCLRFLCPHIGLSGT 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12428.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12428.1.1 >prot_P-wetherbeei_contig12428.1.1 ID=prot_P-wetherbeei_contig12428.1.1|Name=mRNA_P-wetherbeei_contig12428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp VRTRLQSSPYVFRGVMNCILATLRDEGPLAFYKGMAFPLAAQAVYKAVIFback to top mRNA from alignment at P-wetherbeei_contig12428:512..1869+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12428.1.1 ID=mRNA_P-wetherbeei_contig12428.1.1|Name=mRNA_P-wetherbeei_contig12428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1358bp|location=Sequence derived from alignment at P-wetherbeei_contig12428:512..1869+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12428:512..1869+ >mRNA_P-wetherbeei_contig12428.1.1 ID=mRNA_P-wetherbeei_contig12428.1.1|Name=mRNA_P-wetherbeei_contig12428.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig12428:512..1869+ (Phaeothamnion wetherbeei SAG_119_79)back to top |