mRNA_P-wetherbeei_contig12406.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A835ZFT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT0_9STRA) HSP 1 Score: 248 bits (634), Expect = 6.210e-79 Identity = 132/246 (53.66%), Postives = 158/246 (64.23%), Query Frame = 1
Query: 97 SPELFVGAINRTITSIFSDYFKK-ETTDRLPPHVMQVLQHALAFLQLREL-MSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALA-----QGL------VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNGQ-YRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 792
+P LFV + + I S + E LPP + + FL L E ++C VS+ WR + E N LWREPYL RFK H P LA Q L VK F RRL P GDRVEVAWRGKFRLESLEIYNGLAWWLAE+V+ +GQ Y+VHYPGWEARWDE+VPR RLRWGNDR+A QL R VGD VE+WCGG +VPGAWLE V ++G+R++LG+++ G F V R RLV
Sbjct: 3 APSLFVYKVEEAVAVITSHLLRSSEPAASLPPGLFLDIAQ---FLTLEERGKAVCCVSRKWRQLGEHNHLWREPYLTRFKFHSPQEDLATHTEAQELAQPGPKVKDLFARRLVRPQVGDRVEVAWRGKFRLESLEIYNGLAWWLAEIVECDADGQRYKVHYPGWEARWDEFVPRERLRWGNDRRAAQLRDERIAVGDMVEIWCGGTNVPGAWLEGRVSSIRGERVFLGDVVAEGFFSVTEERCRLV 245
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A835ZI68_9STRA (Tudor-knot domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI68_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.330e-70 Identity = 112/200 (56.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 223 FLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL---------VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPN-GQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 792
FL L EL ++ +S++WR ++E + LWREPY RFK+ + S LA G K F RRL P GDRVEVAWRGKFRLESLE+++GLAWWLA+VV + + +Y+VHYPGWE RWDEWV R RLRWGND +A +L G VGDTVE+WCGGV VPGAWLE V ++ DR YLG+ML G F + R RLV
Sbjct: 3 FLSLPELGTLARLSKSWRQLSEHDYLWREPYKARFKISD--SLLAAGSDAAVTPPLSCKEAFARRLLHPQVGDRVEVAWRGKFRLESLEVFSGLAWWLADVVARSDDCRRYKVHYPGWEPRWDEWVSRERLRWGNDARAARLLGHPVEVGDTVEVWCGGVHVPGAWLEGRVSCIRSDRAYLGDMLAAGTFSIPLARCRLV 200
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: W7T606_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T606_9STRA) HSP 1 Score: 219 bits (557), Expect = 2.180e-65 Identity = 110/249 (44.18%), Postives = 157/249 (63.05%), Query Frame = 1
Query: 61 DFTRTVDEKRESSPELFVGAINRTITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFK-LHEPPSALAQ-GLVKHH---FQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNG-QYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRL 789
D ++EK++ +P LF+ + R + +++F K+ ++LP VL + +F+ + EL SV Q W+ ++ +W+ Y++RF LH P A GL + F+ RL DP GD VEVAW+GKFRLES++IY GLAWW A VV+KG NG +Y++HYPGW++RWDEWV R RLRW +Q +R D VE+WC G +VPGAWLEA VR+VKG +G +L++G WV+R RVR+
Sbjct: 157 DLEAALNEKKKKNPNLFIPDVRRLSLEVMAEFFDKDRVNKLPS---AVLIYTASFMSISELGMAASVCQQWKETVQSVAVWKPLYIKRFHFLHSPDDASTGIGLPLSYQALFRARLLDPHVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVARDRLRW----TVEQDLNKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALWVNRERVRI 398
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A4D9D060_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D060_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.130e-64 Identity = 103/241 (42.74%), Postives = 150/241 (62.24%), Query Frame = 1
Query: 61 DFTRTVDEKRESSPELFVGAINRTITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL---VKHH--FQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNG-QYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFW 765
D ++EK++ + LF+ + R + +++F K+ ++LP VL + +F+ + EL SV Q W+ ++ +W+ Y++RF P + G+ V +H F+ RL DP GD VEVAW+GKFRLES++IY GLAWW A VV+KG NG +Y++HYPGW++RWDEWVPR RLRW +Q +R D VE+WC G +VPGAWLEA VR+VKG +G +L++G W
Sbjct: 35 DLEAALNEKKKKNSILFIPDVRRLSLEVMAEFFDKDRVNKLPS---AVLIYTASFMSISELGMAASVCQQWKETVQSGAVWKPLYIKRFHFLHSPDDASTGIGLPVSYHALFRARLLDPYVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVPRDRLRW----TVEQDLNKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALW 268
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: D7FY36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY36_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.410e-58 Identity = 108/252 (42.86%), Postives = 135/252 (53.57%), Query Frame = 1
Query: 157 FKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL---------------------------------------VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPN-GQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 792
FK+E T LP HV+Q ++R AE + LWRE Y ERF + + ++ + G K ++RRL DP GD V+VAW+GKFRLESLE+Y+G AWWLA VV KG G Y+VHYPGWE +WDEWV R RLRWGN+ A L G GD VE+WC G+ VPGAWLEA V V+ +R+YLGE+LT+GHFW VRL+
Sbjct: 59 FKQEVTASLPLHVLQ----------------------DFREAAEGDGLWREAYDERFPVLQSETSESAGQGGPDAGGGGCGPVDCREATATKPTASGRNSSTGDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWEPKWDEWVVRDRLRWGNEHLAAPLKGIPLQAGDAVEVWCKGLHVPGAWLEAVVYEVEKERVYLGEVLTSGHFWARTEHVRLI 288
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A7S4A403_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A403_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.690e-52 Identity = 105/252 (41.67%), Postives = 143/252 (56.75%), Query Frame = 1
Query: 121 INRTITSIFSDYFKKETTDRLPPHVMQ------VLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPP-----SALAQGLVKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQK-------GPNGQ----------YRVHYPGWEARWDEWVPRSRLRWG--NDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVR 786
+ R+ S+ +K + PP V+ + L+FL + ++ +VS++W ++ + LWR+ YL RF SA K +++RL+DP GD VEVAWRGKFRLESLEIY G AWW+A VV K G G+ Y+V +PGWE RWDEWV R RLRW N ++A L R D VE+WCG +VPGAWLEASV++++GD + +G +L+TG WVDR RVR
Sbjct: 68 LGRSSLSVLPATPRKLFEEEAPPVVVSNTLPRDTMLLCLSFLDVTAHTTLSTVSRDWLSLSSEDALWRDHYLNRFSGGSDEGDGETSADEYEDYKQEYKQRLEDPHVGDDVEVAWRGKFRLESLEIYRGTAWWVAVVVDKVALDAASGSPGRGRKIHAAKAWYKVTFPGWEGRWDEWVSRDRLRWRAKNTQEADALKPR-----DFVEVWCGSQNVPGAWLEASVQKIRGDAVEVGRVLSTGSLWVDRSRVR 314
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: D8LI95_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI95_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.350e-49 Identity = 90/231 (38.96%), Postives = 137/231 (59.31%), Query Frame = 1
Query: 112 VGAINRTITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSA--LAQGLVKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNGQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGH--FWVDRPRVRLV 792
VG R++ ++ S + T +L ++L ++ L + +L +C V+++WR+ AE + +WR + RF+ PP G +K + RL+DP+ GD+VEV+W G+FRLESL+++ G +WW A VVQK +Y++HYPGW++ WDEWV R RLRW D R V + VE+WC G V GAWL+A VR++K D++ L +L + WV R +VR V
Sbjct: 5 VGGCRRSVLNMRSG--TRRATGQLAGLPRELLARSMELLNMVDLGQVCCVNKDWRNAAEEDAVWRFWWARRFREDPPPQRGRARAGHLKQLHRYRLEDPLVGDKVEVSWEGRFRLESLDVFVGRSWWEATVVQKMDGFKYKIHYPGWDSNWDEWVVRDRLRWPVDPSYLSTTFR---VREVVEVWCTGTHVKGAWLQARVRQIKQDQVSLKNVLASSPRTVWVPRSKVRRV 230
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A8J2SC81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC81_9STRA) HSP 1 Score: 174 bits (441), Expect = 4.370e-49 Identity = 96/242 (39.67%), Postives = 136/242 (56.20%), Query Frame = 1
Query: 133 ITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQ--GLVKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQK---------GPN--------GQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGV---GDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 792
+ S+ Y+ + LP +++ LA L ++ L ++ +VS+ R A ++ WR Y RF + S ++ F++RL DP PGDRVE+AWRG+FRLE LE+Y GLAWW AEVV+K P+ +Y+VHY W+ARWDEWV R +LRW + R GV GD VE+WC G +VPGAWL A V V+G+ +G++ ++G WV R RVRL+
Sbjct: 70 LVSLVIHYYPPDRLAGLPRELLE--DAVLANLDVKNLAAMAAVSRAARRAASSDAAWRPQYARRFGAADDASEHFDFGASLRESFRQRLGDPAPGDRVEIAWRGRFRLEGLEVYRGLAWWAAEVVEKRDAXXXXXXAPDCPLDDRRARKYKVHYVHWDARWDEWVARDQLRW-------PVPEGRTGVVASGDDVEVWCSGSAVPGAWLRAVVTAVEGELYCVGDVASSGRLWVRRDRVRLI 302
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A7S3K1B0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1B0_9STRA) HSP 1 Score: 153 bits (387), Expect = 9.220e-40 Identity = 92/290 (31.72%), Postives = 130/290 (44.83%), Query Frame = 1
Query: 139 SIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL-VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNG-----------------------------------------------------------------------QYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 792
S+ ++K + LP V V AF ++L + SVS+ ++ +A+++ W+ Y F + G +K + +R++DP GDRVEVAW+G+FRLE LE+Y GLAWW AEV +K PN +YRVHY W++RWDEWV R +LRW ++ +GD VE+WC G +VPGAWL A V V D +G + ++GH WV R RVRLV
Sbjct: 125 SMIITFYKGDCLSLLPREV--VCGSIFAFFPPKQLAHLASVSRGFKQLADSDASWQATYDRAFGNSKAGVTYDYGASLKESYHQRIRDPSTGDRVEVAWQGRFRLEGLEVYRGLAWWAAEVAEKRPNDIASNEEDMIPPEQFPPQHIDNQVVPHEQNHEVDLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTSKRYRVHYLNWDSRWDEWVSREQLRW----PVQEGKNCTIEIGDDVEVWCSGNTVPGAWLRAVVDAVDDDLFCVGNVASSGHLWVSRDRVRLV 408
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A7S2XXB7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB7_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.200e-26 Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 523 YRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRL 789
Y++HYPGW+ RWDEWVPR+RLRW + V D VE+WC G +VPGAWLEA V+ +KG+++++G+ML++G WV + RVRL
Sbjct: 1 YKIHYPGWDTRWDEWVPRNRLRWAMHHNPME----NFQVNDRVEVWCTGSNVPGAWLEAQVKAIKGEQIFVGKMLSSGPLWVAKTRVRL 85 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12406.1.1 >prot_P-wetherbeei_contig12406.1.1 ID=prot_P-wetherbeei_contig12406.1.1|Name=mRNA_P-wetherbeei_contig12406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp MVALDLISNALEAGAVVSLADFTRTVDEKRESSPELFVGAINRTITSIFSback to top mRNA from alignment at P-wetherbeei_contig12406:744..1733+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12406.1.1 ID=mRNA_P-wetherbeei_contig12406.1.1|Name=mRNA_P-wetherbeei_contig12406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=990bp|location=Sequence derived from alignment at P-wetherbeei_contig12406:744..1733+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12406:744..1733+ >mRNA_P-wetherbeei_contig12406.1.1 ID=mRNA_P-wetherbeei_contig12406.1.1|Name=mRNA_P-wetherbeei_contig12406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig12406:744..1733+ (Phaeothamnion wetherbeei SAG_119_79)back to top |