mRNA_P-wetherbeei_contig124.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig124.3.2
Unique NamemRNA_P-wetherbeei_contig124.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 7.000e-84
Identity = 251/865 (29.02%), Postives = 370/865 (42.77%), Query Frame = 2
Query:   14 CVDRVLLVCAGLSEDEDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGPSDLSHQF--------STFVHSSL--------HLRGDE-DSPVETESMAR-------TSAC-----PSTACGSSSLTGATCDETCLSGPD--QRWGGYGCNANGL---GEECRACFTDLAEALEADQNAAKNGGRAIMCDTRMPPVHPSCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGAAGLGQNCRFCHTDEDDALMAMYGRGSSVMCGTLQAPSGAFGVEEQMHGRRLGRAEPGHRQLASFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPY-CNHHNKGLQCRMCYT----SITKARFDMNNGATVIMCDTLKPPSPYGRRLTGTRRRRLQES---------------------------------DVTKKLQNHNGASKSICVFTRAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESSSPGSGGGGAVRFVPLGGSRHKYSELWADEHCGASASLIYYLPAATVFTRTPLSLDLFRVSGELLVSHLDYERLGPKPLHWRAHNLQLLGVPAPSFTHGLDVLLPSSLSAQLRAALTA---SFGNGFMSELE--HFGDNFNAV---ELLGAFAYSSSPPGLFFQDPASWGRVHAGTDIDSIWEVPLLKPPYTCRGDMMMAEARGPELAAALRDA---FLGTDPCHYGWSVLE 2359
            C     LV A LS++E+VYP GPS QFY +YLD  V  Q  EY A AI+E DV +   ++F+ LY  AF  GG  P+W+KG +L G  FHET    E+  VLGHINGNA+Y  +DPAF +FV YT +       SY  DVALWA I++FPYSWPLWQR+   FV  + + N+GF    D+  Q         + F+H SL        H  G + DS      + +       T++C     PS+  G+ +L    CD +C SG +   R+GGY C A  +   G  CR CFTD+ EA  A++  A+    A+   +   PV                G    + G +G   D      GN         G AG+ +         DD ++                P+                              C+ +C  +     T  VCD SC       Y C     G  CR C+     ++T        G +VIMC T +PP+                                                  D   +    +     IC F   +   +   +++++S  +FMPG  V +A ++ D+  +++ +       + PG     A+  + L       + L AD HCG    L++Y+    + +R   S D    +G+LLV + +  R+G          + +LG  +PSF+ G+D++LP   + QLR  L +   + G G   E +  H    F+ V   E+L A AYS + PGL+F +P  W   H      SIW++PL+KP + C  D+ MA A+G ++AAAL      F+    C  G+  L+
Sbjct:  185 CFANTRLVLANLSQEENVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAF--GGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYT-LTRWEYTQSY--DVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGF---QDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGGGAPPSSGVGAGALA-TVCDRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAMRGRSFKMPVDNEKSRRVLRADDGPEGAAGWVEGGEGG--DSRAVLRGNRG-------GGAGVTRRMDAVDGGTDDEMVEXXXXXXXXXXXXXXXPATG----------------------------CSNKCQMK-----TDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPYDPANEPYLKDITRGQICAFMTGFSSFLKETEVTVKSIVQFMPGMRVAIATQDHDVSVFKRSL------GNLPGVVISEAISPITL-------APLLADRHCGKGTKLVFYMNPGELLSRKFTSKDTHSAAGDLLVVYAEVGRVGEASARRALATMSVLGFSSPSFSFGMDIMLPVHTNGQLRELLLSDPGATGKGLDRESQAVHALGKFSGVFVPEVLAALAYSLNEPGLWFINPQQWVTHHMFQQA-SIWDIPLVKPRFGCAFDISMA-AQGYDVAAALETHLGHFMSGSACERGFIPLD 983          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 1.190e-74
Identity = 252/885 (28.47%), Postives = 363/885 (41.02%), Query Frame = 2
Query:   14 CVDRVLLVCAGLSEDEDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGF--AGPSDLSHQFST---FVHSSLHLRGDEDSPVETESMARTSACPSTACGSSSLTGATCDETCLSGPDQRWGGYGCNANGLGEECRACFTDLAEALEADQNAAKNGGRAIMCDTRMPPVHPSCPHSCGLFSSSE---NGRLSLLHGVK--GTICD-MSCSAVGNSTSAFQHG---CGAAG---LGQNCRFCHTDEDDALMA-----MYGRGSS-------VMCGTLQAPSGAFGVEEQMHGRRLGRAEPGHRQLASFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPY-CNHHNKGLQCRMCY----TSITKARFDMNNGATVIMCDTLKPPSPYGR-RLTGTRRRRLQE------------SDVTKKLQNHNGASK------------------------------SICVFTRAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESSSPGSGGGGAVRFVPLGGSRHKYSELWADEHCGASASLIYYLPAATVFTRTPLSLDLFRVSGELLVSHLDYERLGPKPLHWRAHNLQLLGVPAPSFTHGLDVLLPSSLSAQLRAALTAS--------------FGNGFMSELEHFGDNFNAVELLGAFAYSSSPPGLFFQDPASWGRVHAGTDIDSIWEVPLLKPPYTCRGDMMMAE-----ARGPELAAALRDAFLGTDPCHYGWSVLEDTESLAA 2380
            C   V+ V  G+ + E+VYP GPS QFY ++L+  +  +   + A A++E DV +    +F+ LY  AFD     P+WVKG  LAG  FH T    +NW +LGHINGNA+Y  SDPAF DFV +T         SY +DVALWA +++FPYSWPLWQR+   FV TN + N+GF       + +  ++   F+H SL   G                      G+   +GAT ++          GG    A+  G   R     +  +LEA+      GG      TR+    P C   CG   S +           GV    T+CD  +CSA    ++  + G   CGA      G++CR C+ D ++AL A        R +S       +MC TL+ P  +                           TC+ +C  +        +CD  C       Y CN  + G  CR C+     +I   +     G  VIMC+T +PP    +  L    + R++             +   KK  N  G +                                +C F  AY  ++   + S+ S   F+PG  V +AV+      + + +  +              V     GG    ++ L AD HCG    LI YL    V +R     D     GELLV + + ERL    +        LLG  APSF+ G D+ LP+ ++ +LR  L +               F    MS +    D F   ELL A AYS +PP ++F +P  W   H      S+W+VPL+KP + C  ++ +A+     AR     A   D   G   C  G+  L DT  L A
Sbjct:   15 CSASVVAVALGVPQ-ENVYPKGPSVQFYKLFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVV--EPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWG---YSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGG----------------------GTQFASGATAEK----------GGNAAAASEGGNSLR-----IMASLEANAAGEDVGGGGP--STRL--ATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREASEEQPHHVIMCDTLRPPEAS---------------------------TCSLKCATK-----KDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVELTQAELDALEKERIEHVMEAAASKMANAAKQEKKTSNTKGHANPGGKTAGDEGEPDAPVHPAMIEYSKDLLRGEMCAFATAYYLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNRTLGGYPDVE---------VVNATTTGG----HASLLADVHCGEGTKLILYLGPGDVVSRPFSKKDTHGTRGELLVPYTEPERLDEYHIKRTQATTSLLGFDAPSFSFGTDLFLPAWVNRELRRVLASGTALPSKAWKPDDRDFQRIAMSIMMETEDAF-VPELLAALAYSRNPPEIWFLNPTQWVTHHMFKHA-SVWDVPLVKPRFLCAANLALAKQGYDVARELNRFADFSDGGRGKK-CEMGYLAL-DTSKLQA 803          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 7.330e-72
Identity = 242/868 (27.88%), Postives = 355/868 (40.90%), Query Frame = 2
Query:   14 CVDRVLLVCAGLSEDEDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGPSDLSHQFSTFVHSSLHLRGDE-DSPVETESMARTSACPSTACG----------SSSLTGATCDETCLSG--PDQRWGGYGCNANGL---GEECRACFTDLAEALEADQNAA-------------KNGGRAIMCDTRMPPVHPSCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGAAGLGQNCRFCHTDED--DALMAMYGRGSSVMCGTLQAPSGAFGVEEQMHGRRLGRAEPGHRQLASFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPY-CNHHNKGLQCRMCYTSITKAR----FDMNNGATVIMCDTLKPP-------SPYGRRLTGTRRRRLQESD--------------------------VTKKLQNHNGASK---------SICVFTRAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESSSPGSGGGGAVRFVPLGGSRHKYSELWADEHCGASASLIYYLPAATVFTRTPLSLDLFRVSGELLVSHLDYERLGPKPLHWRAHNLQLLGVPAPSFTHGLDVLLPSSLSAQLRAAL----TASFG----NGFMSELEHFGD--NFNAVELLGAFAYSSSPPGLFFQDPASWGRVHAGTDIDSIWEVPLLKPPYTCRGDMMMAEARGPELAAALRDA---FLGTDPCHYG 2344
            C  R  LV A  S+ ++  P   S QFY +YLD  +  QF +Y A A++E +V +    +F+ LY  AF  GG  P+WVKG +L     HE     EN   +GHINGNA+Y  +D  F D+V +T         + P+D ALWA I++FPYSWPLWQR+   FV TN + N+G     D+          +L + G   D  V        +   + +CG          + S T   CD +C +G     R+GG+ C A  +   G  CR CFTDL EA  A+   A             + G  A     R      +       +   E G   +  GV G   +    AVG+     Q G      G N      D D       +  +   +MC TL  P  A G   Q H                                    VCD SC       Y CN    G  CR CY    +A          G +V+MC+T +PP       SP          +  +E+D                          +T +  + N A++          IC F  +    +    +S++S  +FMPG  V +A +  D+  +++      +   S       A+R           + L AD HCG    LI Y+ A  +  RT  S D    +G+LLV++ + +R+G    +     + +LG   PSF+ G D++LP  ++ +LR  L    TA  G    NG +  +   G+       E+L +FAYS +  GL F +P  W   H      SIW++PL+KP ++C  D+ MA  +G ++AAAL +    F+    C +G
Sbjct:  155 CFARTRLVLAHASDKDNERPKMASIQFYKLYLDSTIRCQFADYDALAVMEWNVIVAHDRSFEELYTAAF--GGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWE---YTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVG-VHDVDIRELLDAVAGGTLFIHGTPTDGGVSMVGSNELAERCTVSCGFRFPNAHATMAPSGTATVCDRSCYAGGRDGARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAEDTLALQERLVLEREGDTRTGNVAFEKSWRSDEAAWTYGRGGEGWPQQEVGEQHVEGGVGGNRDNRERGAVGHQR---QQG------GVNIMEPKQDRDMNKVQPILEKQRHVIMCDTLMPPPAASGCSHQCHE-------------------------------MDDAVCDRSCGTGRHGDYNCNWRGYGKNCRYCYNDRLQAMAANVVARQRGGSVVMCNTFEPPTEDEDWESPVEAEKVRAMVKLDEEADADAQEKAPQTSMPAPLPHSFNTGSATLTDEATSSNPANEPFVTGIKRGQICAFLTSNTFFLKETQVSVKSIGQFMPGMRVAIATDANDVSLFKRVFGTVPEVRVSV------AIRSTSR-------APLLADRHCGEGTKLILYMKAGELLWRTFTSRDTHSPAGDLLVAYSELDRVGQSRKNKALAAMLVLGFKGPSFSFGTDIILPVDVNRELRNFLLSDSTAVKGRVSTNGDLQAVHALGNVPGLYVPEVLASFAYSRNAAGLRFINPRQWVTHHMFQKA-SIWDIPLVKPRFSCVIDISMA-VKGYDVAAALEEQLSHFVSGTSCAWG 961          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 5.120e-70
Identity = 252/902 (27.94%), Postives = 369/902 (40.91%), Query Frame = 2
Query:   14 CVDRVLLVCAGLSEDEDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGF--AGPSDLSHQFST---FVHSSLHLRGDEDSPVETESMARTSACPSTACGSSSLTGATCDETCLSGPDQRWGGYGCNANGLGEECRACFTDLAEALEADQNAAKNGGRAIMCDTRMPPVHPSCPHSCGLFSS--------SENGRLSLLHGVKGTICD-MSCSAVGNSTSAFQHG---CGAAG---LGQNCRFCHTDEDDALMA---MYGRGSSV---------MCGTLQAPSGAFGVEEQMHGRRLGRAEPGHRQLASFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPY-CNHHNKGL--------------QCRMCY----TSITKARFDMNNGATVIMCDTLKPPSPYGR-RLTGTRRRRLQE------------SDVTKKLQNHNGASK------------------------------SICVFTRAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESSSPGSGGGGAVRFVPLGGSRHKYSELWADEHCGASASLIYYLPAATVFTRTPLSLDLFRVSGELLVSHLDYERLGPKPLHWRAHNLQLLGVPAPSFTHGLDVLLPSSLSAQLRAALTAS--------------FGNGFMSELEHFGDNFNAVELLGAFAYSSSPPGLFFQDPASWGRVHAGTDIDSIWEVPLLKPPYTCRGDMMMAEARGPELAAALRDAFLGTD-----PCHYGWSVLEDTESLAA 2380
            C   V+ V  G  + E+VYP GPS QFY ++L+     +   + A AI+E DV +    +F+ LY  AFD     P+WVKG  LAG  FH TA   +NW +LGHINGNA+Y  SDPAF DFV +T         SY +DVALWA +++FPYSWPLWQR+   FV TN + N+GF       L +  ++   F+H SL   G                      G+   +GAT ++          GG    A+  G   R   +  A A   D      GG +I   T      P C   CG   S         E+G + +      T+CD  +CSA    ++  + G   CGA      G++CR C+ D ++AL A   +  +   V         MC TL+ P      E      +    +   R  +S R    P     W      ++CD  C       Y CN  + G                CR C+     +I         G  VIMC+T +PP    +  +    ++R++             +   KK  N  G +                                +C F+ AY  ++   + S+ S   F+PG  V +AV+      + + +  +              V     GG    ++ L AD HCG    LI YL    V +R     D     G+LLV + + +RL    +        LLG  APSF++G D+ LP+ ++ +LR  L +               F    MS L    D F   ELL   AYS +PP ++F +P  W   H      S+W++PL+KP + C  ++++A+ +G ++A  L      +D      C  G+  L DT  L A
Sbjct:   15 CSASVVAVALGAPQ-ENVYPKGPSVQFYKLFLEDTFKEKLERFGAIAIMEWDVRVAHDKSFEKLYIAAFDVV--EPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWG---YSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETLGNALASETMFIHGSLSGGG----------------------GTQFASGATAEK----------GGNAAAASEGGNSLRIMASLEANAAGEDVGG---GGPSIRLAT------PECRTECGSTVSWDLLGGGGGEDGVMDIA-----TVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRILQNQAREVGEVQPRHVIMCDTLRPP------EASTCSLKCALKKDTARTNSSMRPP-EPHVNPVWLY-VPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNTHEPPVERTQAEMDALEKKRIEHVMEATASKMANAAKQGKKTSNTKGHANPGGKAAGDEGEPDAPVHPAMIEYSENLLRGEMCAFSTAYHLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNRTLGGYPDVE---------IVNATTTGG----HASLLADVHCGEGTKLILYLGPGDVVSRPFSKKDTHGTCGQLLVPYTEPDRLDEYHVRRTQATTFLLGFDAPSFSYGADLFLPAWVNPELRRVLASGTALPSKAWEPDDRDFQRIAMSILMKTEDAF-VPELLAVLAYSRNPPEIWFLNPTQWVTHHMFKHA-SVWDIPLVKPRFLCSVNLLLAK-QGDDVARELNRFADFSDGGRGKKCEMGYLPL-DTSKLHA 839          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 4.060e-50
Identity = 191/745 (25.64%), Postives = 312/745 (41.88%), Query Frame = 2
Query:   92 FYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGPSDLSHQFST--FVHSSLHLRG---DEDSPVETESMARTSACPSTACGSS---SLTGATCDETCLSGPDQRWGGYGCNAN-GLGEECRACFTDLAEALEADQNAAKNGGRAIMCDTRMPPVHPSCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGAAGLGQNCRFCHTDEDDALMAMYGRGSSVMCGTLQAPSGAFGVEEQMHGRRLGRAEPGH-------RQLASFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPYCNHHNKGLQCRMCYTSITKARFDMNNGATVIMCDTLKPPSPYGRRLTGTRRRRLQESDVTKKLQNHNGASKSICVFTRAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESSSPGSGGGGAVRFVPLGGSRHKYS-ELWADEHCG-ASASLIYYLPAATVFTRTPLSLDLFRVSGELLVSHLDYERLGPKPLHWRAHNLQLLGVPAPSFTHGLDVLLPSSLSAQLRAAL----TASFGNGFMSELEHFGDNFNAVELLGAFAYSSSPPGLFFQDPASWGRVHAGTDIDSIWEVPLLKPPYTCRGD 2260
            FY ++LD  + + F+EY A AI+E DV +    +F+ LY  AF       +WVKG +L G  FH ++   + W VLGHINGNA+Y  +D AF ++V YT        D+YP+DVALW  I++FPYSWPL+QR+ + FV TN    + + G + + H   T      +L + G   DE S +  E +   +        S     L     +E   +  + +W       N  + +  R    D  +  +  +  A   G A     ++     +         + E+G+            + + +A   S              +  R    D +D    +Y R          AP G     E + GR+ G  E          R+L  +R         +W    T +  D S    ++    +  +   + R+  T    A  D    +     ++++P +                 DV +           +C F       +  +++++ S  +F+PG  VVVA E   + A+++ +               G +  V +  ++  ++   +ADE+CG A+ +LIYYL   +V +R+  S D     G+LLV    + +     L  R  N+  LG  AP FT G D++LP   +A LRAAL    T +   G + ++   GD     ++L A  Y  + PG++F +P  W   H      SIWE+PL+KP +TC  D
Sbjct:    2 FYKLFLDERIRSNFSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEE--FWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNNDQAFVEYVDYTRARWE---DNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNL---IAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGSNLSVEKVNEANGTGKNGGASKVVRKLQNWKENEKWKTFEEPKWETSETRTNENVPKAARKLQADSEDVYDRRRLTATQDGSAPKVARKLQKWRDA---------NKESGK---------NKWETTETAKNESVP------------KAARRLQADSED----VYDRRRLTATQDGSAPEGGSQAAE-VEGRQQGVGEEQDGSAPKVARKLQKWRDANKESGKNKWETTETAK--DESVPKVSRELQADSEDVYTRRRLVETPTFAASADRVEVSRFFEMESVRPFA----------------EDVERN---------RVCAFVAGTASQVDQIEVTVSSVLEFVPGMRVVVAAEVDAVDAYERAV---------------GGLPGVSVSSTQSVFTASFFADEYCGVANTTLIYYLKTGSVVSRSFTSKDTHSPQGDLLVV---FGKGHSGDLADRTANV--LGFEAPPFTTGTDLILPVGANADLRAALASEKTVNDAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTNHL-FQTASIWEIPLVKPRFTCELD 655          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 9.120e-48
Identity = 161/546 (29.49%), Postives = 223/546 (40.84%), Query Frame = 2
Query:   14 CVDRVLLVCAGLSEDEDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGP-----SDLSHQFSTFVHSSLHLRGDEDSPVETESMARTSACPSTACGSSSLTGATCDETCLSGPDQRWGGYGCNANGLGEECRACFTDLAEALEADQNAAKNGGRAIMCDTRM---PPVHPSCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGAAG--LGQNCRFCHTDEDDALMAMYGRGSSVMCGTLQAPSGAFGVEEQMHGRRLGRAEPG-----------------HRQLA---------------------------------SFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPY--CNHHNK--GLQCRMCYTSITKARFDMNNGATVIMCDTLKPPSPYGRRLT 1459
            C  R  +V A L+E++D+YP GPS  FYN++LD  V +  + Y A +I+E DV +   ++F+ LY  AF       +WVKG +L G  FH  A + E W VLGHINGNA+Y   DPAF ++V YT          +P+DVALW  I++FPYSWPL+QRY   FV TN ++++G+        SD     + F+H S    G+  S   TE             G +++  AT     L+    +W                      +A E  +N +           +          C   C   S           G +G +CD +CS+  N       GCGA     G +CR C+ D++ A         ++MC T         +   ++GRRL  A+                   HRQL+                                 S  + C   C     +G  GRVCD +C+  N      C   N   G  CR CY    KAR     G   IMC T  P   YGRRLT
Sbjct:   93 CFSRTRIVYANLAEEDDIYPQGPSVMFYNMFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEE--FWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWG---YEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATE-------------GDAAVDVATSQRQ-LTEDVPKW----------------------QAQEKWRNTSXXXXXXXXXXKKQYEDSSDEEGCMDGCEYTSKD---------GTRGRVCDSNCSSP-NVYGTL--GCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTK--------MPVDVYGRRLTPADESNPLLVARDLEALQKDEVHRQLSEDVPKWRAQEKWKNNTXXXXXXXXXXXKQYEDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVDVYGRRLT 577          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.040e-45
Identity = 200/786 (25.45%), Postives = 290/786 (36.90%), Query Frame = 2
Query:   59 EDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGPSDLSHQFSTFVHSSLHLRGDEDSPVETESMARTSACPSTACGSSSLTGATCDETCLSGPDQRWGGYGCNANGLGEECRACFTDLAEALEADQNAAKNGGRAIMCDTRMP-PVHPSCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGAAGLGQNCRFCHTDEDDALMAMYGRGSSVMCGTLQAPSGAFGVEEQMHGRRLGRAEPGHRQLASFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPYCNHHNK----GLQCRMCYTSITKARFDMNNGATVIMCDTLKPPS-----------PYGRRLTGTRRRRLQESDVTKKLQN--------------HNGASK---------SICVFTRAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESSSPGSGGGGAVRFVPLGGSRHKYSELWADEHCGASASLIYYLPAATVFTRTPLSLDLFRVSGELLVSHLDYERLGPKPLHWRAHNLQLLGVPAPSFTHGLDVLLPSSLSAQLRAALTASF--------GNGF----MSELEHFGDNFNAVE----LLGAFAYSSSPPGLFFQDPASWGRVHAGTDIDSIWEVPLLKPPYTC 2251
            +DVYP  PS  FY ++LD  V    +EY A +I+E DV +   ++F+ LY  AF       +WVKG +L G  F  +A++ E W+VLGHINGNA+Y   DPAF ++V YT          +P+DVALW  I++FPYS PL+QRY   FV TN + N           +++T +            P   E M                            P   W                               + N    +  D  MP P+H        +F  S  G     H  + T+ D    AV   T  F HG   A           D   A                               RR G    G   L      C   C     +G  GRVCD +C+ ++         K    G +CR CY    +A      G   IMC T+ P              Y  ++         E +V    +                  A +         ++C F    +D     +++++S  +FMPG  V +A     L A+++ M              GG              + L+AD  CGA  +LI Y+   +V +R     D     G+LLV H   +         R   L +LG+ APSFT G D++LP   +  LR +L            G+G     ++E   F +  +  +    +L A AY+ + PG++F DP  W       +  SIW++PL KP +TC
Sbjct:   28 DDVYPKAPSIMFYKMFLDESVRFSLSEYDALSIIEPDVLVASDNSFEELYHAAFRVNEE--FWVKGSNLEGTSFPSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWG---YEHPYDVALWMTISDFPYSRPLYQRYSSKFVVTNLVGNYS---------RYTTMIR-----------PQPGEGMRPNP------------------------PPLYW------------------------------VSNNNSPTV--DFSMPAPLHVRY-----VFKISYVGDE---HVTQDTVSD----AVAGKT-LFIHGGDVA-----------DVITASAPXXXXXXXXXXXXXXXXXXXXXXXXXRGNRRRG--NDGDETLK-----CTDGCKYTSNDGTRGRVCDANCSRRDVHGTLGCGTKDGAYGTECRACYNDGDEAHKQDTPGNRAIMCSTVMPVDVRSLWLSIDNEDYSLQIGQAMEGEDGEEEVEGSFERVGVDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSM--------------GGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRNDERSRRSGL-VLGLEAPSFTRGTDLMLPVGANKDLRESLGMEMQADSVRRDGDGAAVTALAEPVDFEEVSSVPQARNRMLAALAYARNTPGVWFGDPQVWSGQRLFQEA-SIWDIPLAKPRFTC 685          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 5.510e-45
Identity = 156/560 (27.86%), Postives = 223/560 (39.82%), Query Frame = 2
Query:   14 CVDRVLLVCAGLSEDEDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGP-----SDLSHQFSTFVHSSLHLRGDEDSPVETESMARTSACPSTACGSSSLTGATCDETCLSGPDQRWGGYGCNANGLGEECRACFTDLAEALEADQNAAKNGGRAIMCDTRMPPVHPSCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGAAG--LGQNCRFCHTDEDDALMAMYGRGSSVMCGT---------------------------LQAPSGAFGVEEQMHGRRLGRAEPGHRQ----------------------------------------LASFRKTCNPECPKRWANGATGRVCDPSCNPKNKAPYCNHHNK----GLQCRMCYTSITKARFDMNNGATVIMCDTLKPPSPYGRRLT 1459
            C  R  +V A L+E++D+YP GPS  FYN++LD  V +  +EY A +I+E DV +   ++F+ LY  AF       +WVKG +L G  FH  A + E W++LGHINGNA+Y   DPAF ++V YT          +P+DVALW  I++FPYSWPL+QRY   FV TN ++++G+        SD     + F+H S    G+  S   TE             G +S+   T  +  L+    +W           E+ +                  +G                 P   G  +  E    +   G +G +CD +CS    S +    GCGA     G +CR C+ D + A         ++MC T                           LQ  + +  VEE    R+L    P  ++                                         +S  + C   C     +G  GRVCD +C+  +         K    G  CR CY  + KAR         IMC T  P   YGRRLT
Sbjct:   91 CFARTRIVFANLAEEDDIYPQGPSVMFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEE--FWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWG---YEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAIAGNTLFIHGSSVDEGNVASYEATE-------------GDASVD-VTATQRHLTEDVPKWKEQ--------EKWKTSXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPDEEGCMNGCE---YTSKDGTRGRVCDSNCS---RSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPVDVYDRRLTAVESDPLLVARDLEVLQKDASSPSVEEH---RQLTEDVPKWKEQEKWKXXXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSSDEEGCLDGCEYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPVDVYGRRLT 614          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.100e-44
Identity = 157/560 (28.04%), Postives = 224/560 (40.00%), Query Frame = 2
Query:   14 CVDRVLLVCAGLSEDEDVYPLGPSQQFYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGPSDLSHQF--STFVHSSLHLRGDEDSPVETESMARTSACPSTACGSSSLTGATCDETCLSGPDQRWGGYGCNANGLGEECRACFTDLAEALEADQNAAKNGGRAIMCDTRMPPVHP-----SCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGA--AGLGQNCRFCHTDEDDALMAMYGRGSSVMCGTLQAPSG---AFGVEEQMHGRRLGR-------------AEPGHRQLASFRK-------------------------------------------------TCNPECPKRWANGATGRVCDPSCNPKNK--APYCN--HHNKGLQCRMCYTSITKARFDMNNGATVIMCDTLKPPSPYGRRLT 1459
            C  R  +V A L+E++D+YP GPS  FY ++LD  V +  +EY A +IVE DV +   ++F+ LY  AF       +WVKG +L G  FH +A++ E W+VLGHINGNA+Y   DPAF ++V YT          +P+DVALW  I++FPYSWPL+QRY   FV TN ++ +G+     +SH          +L + G   S VE  ++A   A  STA  +  +   T     L+G   +W           E+ R+   D                                   +C  +C   S           G +G +CD +CS      +    GC A     G+ CR C  D D A         S+MC T +   G       +++    R+ R              E  HRQL+                                                      C+  C     +G  GRVCD +C+  +      CN      G +CR C+  + KAR         I+C   +P   YGRRLT
Sbjct:   92 CFSRTRVVYANLAEEDDIYPKGPSVMFYKMFLDENVRSSLSEYDALSIVEWDVLVASDNSFEELYHAAFRVNEE--FWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWG---YEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGY---EHVSHDTVSDAVAGKTLFIHG---SSVEDGNVASYEAVASTATATVDVAKQTRGRK-LTGSTPKWKTQ--------EKWRSSKDDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSTCEYTSRD---------GTRGRVCDANCSTPDVYGT---RGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTKRPVEGYGRRLTADDESDPLRVARDLETLQEDASSPSGEEEHRQLSGSTPKWKSQEKWRTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSSCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIICSNKRPVEGYGRRLT 619          
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.220e-42
Identity = 200/791 (25.28%), Postives = 299/791 (37.80%), Query Frame = 2
Query:   92 FYNIYLDPYVSTQFTEYAAFAIVERDVTITKASAFDMLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYTLSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHLFVRTNFMTNLGFAGPSDLSHQFSTFVHSSLHLRGDEDSPVETESMARTSACPSTACGSSSLTGATCDETCLSGPDQRWGGY-------------------------------------------------------------GCNAN-GL-GEECRACFTDLAEALEADQ--NAAKNGGRAIMCDTRMPPVHPSCPHSCGLFSSSENGRLSLLHGVKGTICDMSCSAVGNSTSAFQHGCGAAGLGQNCRFCHTDEDDALMAMYGRGSSVMCGTLQAPSGAF--------------GVEEQMHGRRLGRAEPGHRQLASFRKT-CNPECPKRWANGATGRVCDPSCNPKN----KAPYCNHHNKGLQCRMCYTSITKARFDMNNGATVIMCDTLKPPSPYGRRLTGTRR-------RRLQESDVTKKLQNHNGASKSICVFTRAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESSSPGSGGGGAVRFVPLGG---------SRHKYSELWADEHCGASASLIYYLPAATVFTRTPLSLDLFRVSGELLVSHLDYERLGPKPLH---WRAHNLQLLGVPAPSFTHGLDVLLPSSLSAQLRAALTASFGNGFMSELEHFGDNFNAV---ELLGAFAYSSSP 2146
            FYN++LD  V +  +EY A +I+E DV +   ++F+ LY  AF       +WVKG +L G  FH TA++ E W+VLGHINGNA+Y   DPAF ++V YT          +P+DVALW  I++FPYSWPL+QRY   FV TN + N+           F     +++ L+  E  P +  S   TS  P          G   D T                                                                         GCNA  G+ G +CR C+  + +AL+ D   N A      ++C T MP                    + + H       +   S V    +A +    A+   +        + D  +    R  +          G                G E             G    +S     C+  C     +G  GRVCD +C+  N    K         G  CR+CY ++ +A    +     IMC T+ P   YGRRL+ +         + ++  +V  +        K+I  F  A  +   + D+   +   F+ G     A+ E  + +  Q M       ++   G     R   LGG              + L+AD++CGA  +LI Y+   +V +R   S D     G+LLV H       P   H    R+ +  +LG  APSFTHG D++LP   +  LR +L    G    + L+H GD  + +   EL+G    S+ P
Sbjct:    2 FYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEE--FWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWG---YEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLVGNVA---------SFRATAAAAVALKKPE--PAQQSSRKLTSV-PKWKKAEKWRNGND-DGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNSVDKALKQDSPDNRAIMYDAVVVCSTVMP--------------------VDVYHRRMSAADEGEASRVARRLAALKED--ASSPAEEVELAVKVDQDRKLTSVPRWKAKEKWRTANDDGIXXXXXXXXXXXXKXXGGEXXXXXXXXXXXXNGSSDDSSSSDPGCSSRCTYTSKDGTKGRVCDSNCSTPNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTMMPVDVYGRRLSASDEGDPLRVAKMIEAEEVGDEWSVDVDRVKAIRFFEEA-AERPFFQDLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERS--LGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTG----SPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRESLGFRLG----ASLQHDGDGASLIALEELVGFDRVSALP 741          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig124.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KZV7_9PHAE7.000e-8429.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LCC7_ECTSI1.190e-7428.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6N3_9PHAE7.330e-7227.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JKY0_9PHAE5.120e-7027.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLE5_ECTSI4.060e-5025.64Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus T... [more]
D7FI37_ECTSI9.120e-4829.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L131_9PHAE2.040e-4525.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LJP6_9PHAE5.510e-4527.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI63_ECTSI1.100e-4428.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4M7_9PHAE1.220e-4225.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig124contigP-wetherbeei_contig124:8301..12568 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI63
Model size2970
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.38e-37
EggNOG OGs2D0G2@1|root,2SE3H@2759|Eukaryota
Cds size2193
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig124.3.2prot_P-wetherbeei_contig124.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig124 8500..11990 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185947.8171225-UTR-P-wetherbeei_contig124:8300..84991683185947.8171225-UTR-P-wetherbeei_contig124:8300..8499Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig124 8301..8499 +
1683185947.9010534-UTR-P-wetherbeei_contig124:11990..125681683185947.9010534-UTR-P-wetherbeei_contig124:11990..12568Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig124 11991..12568 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185947.827639-CDS-P-wetherbeei_contig124:8499..86701683185947.827639-CDS-P-wetherbeei_contig124:8499..8670Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig124 8500..8670 +
1683185947.8361459-CDS-P-wetherbeei_contig124:8821..90501683185947.8361459-CDS-P-wetherbeei_contig124:8821..9050Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig124 8822..9050 +
1683185947.844912-CDS-P-wetherbeei_contig124:9300..94701683185947.844912-CDS-P-wetherbeei_contig124:9300..9470Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig124 9301..9470 +
1683185947.8567045-CDS-P-wetherbeei_contig124:9708..99811683185947.8567045-CDS-P-wetherbeei_contig124:9708..9981Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig124 9709..9981 +
1683185947.8646295-CDS-P-wetherbeei_contig124:10138..105451683185947.8646295-CDS-P-wetherbeei_contig124:10138..10545Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig124 10139..10545 +
1683185947.8792543-CDS-P-wetherbeei_contig124:10732..108851683185947.8792543-CDS-P-wetherbeei_contig124:10732..10885Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig124 10733..10885 +
1683185947.891021-CDS-P-wetherbeei_contig124:11200..119901683185947.891021-CDS-P-wetherbeei_contig124:11200..11990Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig124 11201..11990 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig124.3.2

>prot_P-wetherbeei_contig124.3.2 ID=prot_P-wetherbeei_contig124.3.2|Name=mRNA_P-wetherbeei_contig124.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=731bp
MLYDLAFDAGGRTPYWVKGGSLAGNEFHETAQSKENWEVLGHINGNALYT
LSDPAFTDFVRYTAMMHPPVPDSYPFDVALWAVIANFPYSWPLWQRYLHL
FVRTNFMTNLGFAGPSDLSHQFSTFVHSSLHLRGDEDSPVETESMARTSA
CPSTACGSSSLTGATCDETCLSGPDQRWGGYGCNANGLGEECRACFTDLA
EALEADQNAAKNGGRAIMCDTRMPPVHPSCPHSCGLFSSSENGRLSLLHG
VKGTICDMSCSAVGNSTSAFQHGCGAAGLGQNCRFCHTDEDDALMAMYGR
GSSVMCGTLQAPSGAFGVEEQMHGRRLGRAEPGHRQLASFRKTCNPECPK
RWANGATGRVCDPSCNPKNKAPYCNHHNKGLQCRMCYTSITKARFDMNNG
ATVIMCDTLKPPSPYGRRLTGTRRRRLQESDVTKKLQNHNGASKSICVFT
RAYLDHMPYLDISIESARKFMPGSDVVVAVEEADLGAWQQDMERWTKESS
SPGSGGGGAVRFVPLGGSRHKYSELWADEHCGASASLIYYLPAATVFTRT
PLSLDLFRVSGELLVSHLDYERLGPKPLHWRAHNLQLLGVPAPSFTHGLD
VLLPSSLSAQLRAALTASFGNGFMSELEHFGDNFNAVELLGAFAYSSSPP
GLFFQDPASWGRVHAGTDIDSIWEVPLLKPPYTCRGDMMMAEARGPELAA
ALRDAFLGTDPCHYGWSVLEDTESLAADTW*
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mRNA from alignment at P-wetherbeei_contig124:8301..12568+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig124.3.2 ID=mRNA_P-wetherbeei_contig124.3.2|Name=mRNA_P-wetherbeei_contig124.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4268bp|location=Sequence derived from alignment at P-wetherbeei_contig124:8301..12568+ (Phaeothamnion wetherbeei SAG_119_79)
ACGCGTCAAGGACTGCGTCGACCGTGTTCTTCTGGTCTGCGCAGGCCTTT CAGAAGATGAGGACGTTTACCCTTTGGGGCCGAGCCAACAGTTCTACAAT ATCTACTTAGACCCCTATGTCTCGACGCAGTTCACCGAGTACGCCGCCTT TGCCATCGTCGAACGGGACGTTACCATCACCAAGGCCAGCGCCTTTGACA TGCTGTACGACCTCGCTTTCGACGCCGGCGGGCGCACCCCGTACTGGGTC AAGGGCGGCTCTTTGGCAGGGAATGAGTTCCACGAGACGGCCCAAAGCAA GGAAAATTGGGAGGTTCTTGGCCACATCAACGGCAACGCGCTCTACACGT TATCCGATCCTGCTTTCACGGTGAGATGCCGAGCCAGCTGCCTTCCCCAT CCCTAGTGCCTTCTTCTTTGCTAGTGCCTTCTTTCTTTGCCGCATTTTTT CTCTTCTCGCTAAAATTATTCTTTCCCGCTGGCTTCCTCGTACTGCGTTC ACCGCCGCTCGTCGTGCTCAGGATTTCGTCCGCTACACAGCTATGATGCA TCCGCCAGTGCCGGACTCGTACCCGTTTGACGTCGCCCTCTGGGCGGTCA TAGCCAACTTTCCCTACAGCTGGCCGCTTTGGCAGCGCTACCTCCACCTC TTCGTGCGCACCAATTTCATGACGAACCTAGGGTTCGCGGGTCCTTCGGA CCTCTCGCACCAGTTTTCCACCTTCGTCCACTCGAGCTTGCACCTGAGAG GTAAAATCTAAATATCTAATTCTATGCTTGCAGGACGGGGCGACCAGGGG GATGTCTTGGCCGCAGCAATACAACTAAAGTCTCTCCGGCACTTCCCTCG CTTTTTGCTGCTCCCGTCGCCTCAGTTTTACAGTGCTGTTTTTACGTTGG TGCGTCTTTGAGAGACGATCCGCATTTTGGGGGTTTTATATATCACTGTA CCTCGTGTCCCGCCACGAAAACGTGCGCGCGACCTTGTCGCATATGGCAG GCGATGAGGACTCCCCGGTCGAGACGGAATCGATGGCACGCACAAGCGCC TGCCCCAGCACAGCCTGTGGCAGCTCGAGCTTGACCGGGGCGACGTGCGA CGAGACGTGCCTCTCCGGGCCCGACCAGCGCTGGGGCGGTTACGGTTGCA ACGCGAACGGTCTTGGCGAGGTGCGCGAGAGAAGCAAACTGGGCGCGGAT TGTCCGTGAGCTGTTGACACTGGCAAATATGTCAGTGTCCCATTTTTGTG CAATACCTATGTCTTTTGATCTGAGAAGCGACTACCTAAAGCATCTTGTT ATCTTGTTACCCGATGTGCGGAGCGGCTGCGCTCTAAGCTCTTCCTTTCC TGCGCCCCCGCCTTCCTTGCTTCCATTGCGTTGCCGCATGGCGATGAACC GAATGCAGGAGTGCCGTGCCTGCTTCACCGACCTTGCTGAAGCACTGGAA GCCGACCAGAATGCCGCCAAGAATGGCGGGCGTGCCATCATGTGTGACAC GCGCATGCCCCCGGTCCACCCGTCGTGCCCGCACAGCTGCGGCCTCTTCA GTTCGAGCGAAAACGGGCGGCTGTCGCTGTTACACGGCGTCAAGGGCACA ATCTGCGACATGTCCTGCTCCGCGGTGGGCAACAGCACATCCGCTTTTCA GCACGGCTGCGGTGCCGCAGGACTTGGACAGGTAAGTCCATTCCGTCGCC CGTCTATCTTGCATCGGCGGCGGCTGCAATGCGAAAGTGGTTTCCCCCAG CACCGTTCACCATTCGCTTGGTTTGAGACTGACTTCTGCGCGCCTCTTCC TTTTCTGGTCGCTGCGGTTCCTCCCGCGAGCCACACAGAACTGCCGCTTC TGCCACACGGACGAGGATGACGCGCTGATGGCGATGTACGGAAGGGGGTC GTCTGTCATGTGTGGGACGCTGCAGGCGCCCTCCGGCGCCTTTGGAGTGG AAGAGCAAATGCACGGTCGCCGGCTGGGGAGGGCGGAGCCAGGCCATCGG CAGCTGGCTAGTTTTAGGAAAACTTGCAACCCGGAGTGCCCTAAGCGTTG GGCCAATGGTGCCACGGGACGGGTATGTGACCCGAGTTGTAACCCGAAGA ACAAAGCGCCCTATTGCAACCATCACAATAAGGGACTACAGTGCCGTATG TGCTACACTAGCATCACCAAGGCACGCTTTGACATGAACAACGGTGCGAC CGTCATCATGTGCGACACGTTGAAGCCCCCGTCCCCGTATGGACGGTGAG CTGACACGACCGGTCGTGCGGAGGTCCTCGCCCGTGCGGCCAGCGTCGCT GATTTCATTCCAGGCAATGTCTGCCCGCACGCTGCGTCCATCTCTTGTGG CATGCACCGCTGACCCGGTCACCTTTTCTTGCCCCTTGCCTCGTCTTTTT GCCGCCCGCGCAACTGCTGCTGCAAAATCCAGGAGGCTCACCGGTACCCG GAGACGGCGGCTGCAAGAGAGCGATGTGACCAAGAAGCTACAGAACCATA ATGGGGCGAGCAAGTCAATCTGCGTGTTCACGCGTGCCTACCTGGACCAC ATGCCGTACCTGGACATTTCTATCGAGAGTGCGAGGTAAGGGGGGGAGCC GTGTTTTCACTGAAAGAAGGGAGCTAAGCTCCGTTGTGGTTCAGAAAATA GGAGAGGCAAAGTGCTGGCGGCAGCTCCTGAAGTGAGACTCCGATTTTCC TTTAAAAAAGAGCATTTAATGCGTGGCGGCGGGCGATTGTGTAGGGCATC CTGATTTGGCTGGCTGACTGTTGAAGGTGATCGGGTAGAGGTATTTAACC AGTTTCCGCATTCGTCATGTTCCCTCAGCAAAATAGTGGCGGAAGCCCCA TTGCCGCGCTTATTTCCAATGTCAACCCCACGCGAGTCACGTAATCACAG GAAGTTCATGCCGGGCTCTGATGTGGTAGTCGCAGTGGAAGAGGCTGACT TGGGGGCGTGGCAGCAGGACATGGAACGGTGGACCAAGGAGAGCTCTTCG CCTGGCAGCGGGGGCGGTGGCGCCGTCCGGTTCGTTCCCCTCGGCGGCAG CCGCCACAAGTACTCGGAGCTTTGGGCGGACGAGCACTGCGGCGCATCAG CATCACTCATCTACTACCTCCCGGCGGCGACGGTTTTCACGCGGACGCCC CTCTCGCTGGACCTGTTCCGCGTTTCAGGCGAACTGCTCGTCTCGCATCT CGACTACGAGCGCTTAGGCCCCAAGCCGCTCCACTGGCGTGCACACAACC TCCAGCTGCTCGGCGTCCCGGCGCCGAGCTTCACGCATGGCCTCGACGTT CTGCTGCCGTCCAGCCTCAGCGCTCAGCTGCGGGCGGCGCTGACTGCGTC TTTTGGCAACGGCTTCATGTCAGAGCTCGAGCACTTCGGCGACAATTTCA ACGCCGTCGAGCTGCTCGGCGCCTTCGCGTACTCGAGCTCGCCGCCGGGC CTCTTCTTCCAGGACCCTGCCTCGTGGGGCCGCGTGCATGCCGGGACCGA CATCGACTCCATCTGGGAGGTCCCGCTCCTCAAGCCACCCTATACGTGCC GCGGTGACATGATGATGGCGGAGGCGCGCGGCCCCGAGCTCGCCGCCGCC CTTCGCGACGCCTTCCTCGGGACGGACCCGTGCCACTACGGCTGGTCTGT CCTCGAGGATACCGAGTCGCTGGCGGCCGACACATGGTGATGAAGCAGAT TAGGAACACCAAGCCAGCAGCATCGGGGCTCGTTCGATTGAAGCGGCAGA AGGAAGCGACCGATAGATCATGACAATTTGGATTTTTGCGGCAAATGCAC CCCGACAAATTCGGTGTGCCATGGGCATTTTGTTGCCAAGCCGGCTGGAG CTGAGCAAATTTCTGTCTATTTCACTTGGAAGGACAGGAAACAAACGACG AGGATGGCTGCCTTTTTAGGCGGCAGGCAGTACACGCTATGTAAAACGTT GAGAAGGATGTTTCTTGATAAGGGTGTATCATTAGATAAGTTTTGTTGGT CTGGGTTCACTTCTCCGGCTCCATGTGGTTATTATGTTTGAAACGCTTGC TATATGGCGTGGCAACGAATGCGGCTGATGCGAAAGCGAACCGCGCGCTA GTGTAAAGGTATATATATAATATAATGTACGTGACCGACACATTTCCGGT ACTCTTATGGGAAGGTTGGCTCTACCTTAGCGGTACCATCAGAGGAAAGG AACCTTTCTTACTATACATAAATCATCAATAATTTATGCGAGGCCCCTAA TTTATGCATAATTTCACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig124:8301..12568+

>mRNA_P-wetherbeei_contig124.3.2 ID=mRNA_P-wetherbeei_contig124.3.2|Name=mRNA_P-wetherbeei_contig124.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2193bp|location=Sequence derived from alignment at P-wetherbeei_contig124:8301..12568+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGTACGACCTCGCTTTCGACGCCGGCGGGCGCACCCCGTACTGGGT
CAAGGGCGGCTCTTTGGCAGGGAATGAGTTCCACGAGACGGCCCAAAGCA
AGGAAAATTGGGAGGTTCTTGGCCACATCAACGGCAACGCGCTCTACACG
TTATCCGATCCTGCTTTCACGGATTTCGTCCGCTACACAGCTATGATGCA
TCCGCCAGTGCCGGACTCGTACCCGTTTGACGTCGCCCTCTGGGCGGTCA
TAGCCAACTTTCCCTACAGCTGGCCGCTTTGGCAGCGCTACCTCCACCTC
TTCGTGCGCACCAATTTCATGACGAACCTAGGGTTCGCGGGTCCTTCGGA
CCTCTCGCACCAGTTTTCCACCTTCGTCCACTCGAGCTTGCACCTGAGAG
GCGATGAGGACTCCCCGGTCGAGACGGAATCGATGGCACGCACAAGCGCC
TGCCCCAGCACAGCCTGTGGCAGCTCGAGCTTGACCGGGGCGACGTGCGA
CGAGACGTGCCTCTCCGGGCCCGACCAGCGCTGGGGCGGTTACGGTTGCA
ACGCGAACGGTCTTGGCGAGGAGTGCCGTGCCTGCTTCACCGACCTTGCT
GAAGCACTGGAAGCCGACCAGAATGCCGCCAAGAATGGCGGGCGTGCCAT
CATGTGTGACACGCGCATGCCCCCGGTCCACCCGTCGTGCCCGCACAGCT
GCGGCCTCTTCAGTTCGAGCGAAAACGGGCGGCTGTCGCTGTTACACGGC
GTCAAGGGCACAATCTGCGACATGTCCTGCTCCGCGGTGGGCAACAGCAC
ATCCGCTTTTCAGCACGGCTGCGGTGCCGCAGGACTTGGACAGAACTGCC
GCTTCTGCCACACGGACGAGGATGACGCGCTGATGGCGATGTACGGAAGG
GGGTCGTCTGTCATGTGTGGGACGCTGCAGGCGCCCTCCGGCGCCTTTGG
AGTGGAAGAGCAAATGCACGGTCGCCGGCTGGGGAGGGCGGAGCCAGGCC
ATCGGCAGCTGGCTAGTTTTAGGAAAACTTGCAACCCGGAGTGCCCTAAG
CGTTGGGCCAATGGTGCCACGGGACGGGTATGTGACCCGAGTTGTAACCC
GAAGAACAAAGCGCCCTATTGCAACCATCACAATAAGGGACTACAGTGCC
GTATGTGCTACACTAGCATCACCAAGGCACGCTTTGACATGAACAACGGT
GCGACCGTCATCATGTGCGACACGTTGAAGCCCCCGTCCCCGTATGGACG
GAGGCTCACCGGTACCCGGAGACGGCGGCTGCAAGAGAGCGATGTGACCA
AGAAGCTACAGAACCATAATGGGGCGAGCAAGTCAATCTGCGTGTTCACG
CGTGCCTACCTGGACCACATGCCGTACCTGGACATTTCTATCGAGAGTGC
GAGGAAGTTCATGCCGGGCTCTGATGTGGTAGTCGCAGTGGAAGAGGCTG
ACTTGGGGGCGTGGCAGCAGGACATGGAACGGTGGACCAAGGAGAGCTCT
TCGCCTGGCAGCGGGGGCGGTGGCGCCGTCCGGTTCGTTCCCCTCGGCGG
CAGCCGCCACAAGTACTCGGAGCTTTGGGCGGACGAGCACTGCGGCGCAT
CAGCATCACTCATCTACTACCTCCCGGCGGCGACGGTTTTCACGCGGACG
CCCCTCTCGCTGGACCTGTTCCGCGTTTCAGGCGAACTGCTCGTCTCGCA
TCTCGACTACGAGCGCTTAGGCCCCAAGCCGCTCCACTGGCGTGCACACA
ACCTCCAGCTGCTCGGCGTCCCGGCGCCGAGCTTCACGCATGGCCTCGAC
GTTCTGCTGCCGTCCAGCCTCAGCGCTCAGCTGCGGGCGGCGCTGACTGC
GTCTTTTGGCAACGGCTTCATGTCAGAGCTCGAGCACTTCGGCGACAATT
TCAACGCCGTCGAGCTGCTCGGCGCCTTCGCGTACTCGAGCTCGCCGCCG
GGCCTCTTCTTCCAGGACCCTGCCTCGTGGGGCCGCGTGCATGCCGGGAC
CGACATCGACTCCATCTGGGAGGTCCCGCTCCTCAAGCCACCCTATACGT
GCCGCGGTGACATGATGATGGCGGAGGCGCGCGGCCCCGAGCTCGCCGCC
GCCCTTCGCGACGCCTTCCTCGGGACGGACCCGTGCCACTACGGCTGGTC
TGTCCTCGAGGATACCGAGTCGCTGGCGGCCGACACATGGTGA
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