mRNA_P-wetherbeei_contig12399.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A836CLX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX5_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.620e-72 Identity = 104/170 (61.18%), Postives = 130/170 (76.47%), Query Frame = 1
Query: 46 MSDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTHEGRPWDESPFVPTHAVSTPAGFVLD 555
MS Y S +AA L +RRD AP+G+LVVP L E+G +GAF LEVHSD ++ +ELPE +S+ +A EWA SAGG+HL +TW+ NP + L++R G A +RI LSRPE +WRAAC AD+VGCMMGFY++ GTRP R GAV HEG+PWDESPFVPTH V+TPAGFVL+
Sbjct: 1 MSSYASPDAAAAALPALRRDWAPHGVLVVPTLGERGARGAFALEVHSDLPLDARELPEATSRALAAEWAEGSAGGAHLHAETWRRNPAFQLRLRDAGAA-RVRIALSRPEAEWRAACQADSVGCMMGFYVLHGTRPVRAPGAVLHEGKPWDESPFVPTHCVATPAGFVLE 169
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: D8LK55_ECTSI (Calpain_III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK55_ECTSI) HSP 1 Score: 209 bits (532), Expect = 8.330e-65 Identity = 108/221 (48.87%), Postives = 141/221 (63.80%), Query Frame = 1
Query: 46 MSDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTHEGRPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVS-DADFSLKR 705
MSDY+STEA+T++L+ +RRD PNGL +V +ELPET+S+T+A EW +AGGSH+ D W NPC+ LK+RT G +RI+LSRPE+DW+ C D+VGCMMGFYLM G++P R A+ HEGRP++ SP VPTH VSTP GF+LD ++++TIMPAT E GK GPF IS+ + DADFSL+R
Sbjct: 1 MSDYRSTEASTLMLKSLRRDFMPNGLFLV------------------------EELPETTSRTIAAEWGTQTAGGSHIHPD-WTKNPCFHLKLRTTG-PTKVRISLSRPEKDWKNKCIRDSVGCMMGFYLMSGSKPNRNQ-AIFHEGRPYEGSPMVPTHEVSTPPGFMLDN-------------TSEDDIFTIMPATFEPGKTGPFFISIATTDADFSLRR 181
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A7S2D2G9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D2G9_9STRA) HSP 1 Score: 221 bits (563), Expect = 5.960e-63 Identity = 112/236 (47.46%), Postives = 157/236 (66.53%), Query Frame = 1
Query: 1 LPDRKMAISALDWCRMSDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVAVPIRITLSRP--ERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTHEGRPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVSDADFSLK 702
+PDRKM I A +W + +DY+ ++ A ++L V + AP+GLL++P LSE G KG F LEVHSD V V+ LP+T S+T+AGEW ++GGSH+ +WK NP Y L++ ++I+LSRP W+A D+VG M+GFYL++G P R A V H+G+PW E+PFVP ++VSTP+ FVL+ P+ DE VY+I+PAT E+GK GPF +SVV+D DFSL+
Sbjct: 719 MPDRKMVIDAKEWYQTTDYKRSDVAMLMLPNVSVNWAPHGLLLIPTLSEIGAKGQFVLEVHSDYPVVVESLPDTKSRTLAGEWTESNSGGSHMH-QSWKKNPLYHLRL-LGNKRSKVKISLSRPAGNASWKAQTGKDSVGSMIGFYLVQGPAPTRDAAEVYHDGKPWSETPFVPMNSVSTPSNFVLE--PLEDE------------VYSIIPATFEAGKKGPFFLSVVADCDFSLQ 938
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A7S1U0F0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0F0_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.660e-53 Identity = 104/243 (42.80%), Postives = 148/243 (60.91%), Query Frame = 1
Query: 4 PDRKMAISALDWCRMSDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTH-EGRPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVSDADFSLKRDNGTGGSG 729
P+ I+A DW RM+ Y++ E A + L V + +GL+V P LS +G KG + LEVHS + ++ L + + KT+AGEWA SAGGSH+ TD+WK NP + L++ + G A +++ LSRPE W + VG MMGFY+ +G RP R GAVT G+PW +S FVP+ V TP F+L+ P+ D+ + YTIMPAT + G GPF ++V S+A FSL+R++ G G
Sbjct: 760 PETLKCINAADWHRMNLYENVETACLTLTNVTSASFTDGLIVSPCLSSRGTKGTYVLEVHSSLPLRIEGLTDGADKTLAGEWAEGSAGGSHIHTDSWKKNPKFQLRLNSTGPA-QVKVRLSRPEDYWAPKMLRNAVGAMMGFYIYQGQRPNR--GAVTLVNGKPWSDSAFVPSLDVCTPQNFILE--PLPDD-----------DFYTIMPATYDPGNHGPFHLTVTSEAPFSLRRESDGGNKG 986
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A7S2HTQ9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTQ9_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.770e-47 Identity = 94/233 (40.34%), Postives = 135/233 (57.94%), Query Frame = 1
Query: 34 DWCRMSDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTHEGRPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVSDADFSLK--RDNGTGGS 726
DWC+M+ Y S A + L + AP G++VVP++SE G G F+L+V SDR + V+ +P S ++G+WA +AGG H+ + TW+ NP Y ++ + V ++ITL R DW+ VG M+G Y++RG RP R +V HEG+PW E+ F+P + VSTP FVLD + ++I+PAT E + GPF ++VVSD DFSL R NG GS
Sbjct: 802 DWCQMTSYTSGTVAPMKLPDLSPSWAPEGVMVVPSISEAGATGQFSLQVFSDRDITVECVPPLRSTAISGKWAEGTAGGCHMHS-TWQKNPIYHIRF-SRKVRARVKITLFRNTVDWKEQLKKGGVGTMLGLYVVRGKRPNRDCPSVMHEGQPWSETSFLPMNEVSTPPQFVLDN--------------SDDSYFSIIPATFEPNQTGPFFLTVVSDVDFSLTVPRTNGRSGS 1018
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A7S3MFV8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFV8_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.060e-45 Identity = 88/225 (39.11%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 49 SDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTP---GVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTHEG--RPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVSDADFSLKRD 708
+ + S + + + R PNGLLVVP L+EK +KG+F LEV++ ++ + LPET S+++AGEW +++GG+HL TWK NP + LK P A +RITL+R +WR+ DTVGCM+GFY+ + H G RP+ ES FVP +ST F+L PV E YTIMP T GK+G F+IS++S+ +F++ +D
Sbjct: 8 TSFCSKTESCVFFPKIPRAWIPNGLLVVPCLNEKNIKGSFDLEVYASEKIYLNALPETYSRSIAGEWVDNASGGNHLNPGTWKKNPKFSLKFHYPVHSEDAAHVRITLARVGTNWRSLSKRDTVGCMIGFYIF-----------INHGGELRPYYESTFVPDAEISTDPSFML---PVLQHG----------ETYTIMPTTFGEGKVGSFVISILSEYEFAITKD 208
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A6H5KJK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK2_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.290e-45 Identity = 72/119 (60.50%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 127 VVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTHE 483
+VP LSEKGVKGA++LE+HSD VEV+ELPET+S+T+A EW +AGGSH+ D WK NPC+ LK+RT G +RI+LSRPE+DW+ C D+VGCMMGFYLM G++P R A+ HE
Sbjct: 1 MVPTLSEKGVKGAYSLEIHSDHAVEVEELPETTSRTIAAEWGTQTAGGSHIHPD-WKKNPCFHLKLRTTG-PTKVRISLSRPEKDWKNKCIRDSVGCMMGFYLMSGSKPNRNQ-AIFHE 116
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A8J2SDL8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDL8_9STRA) HSP 1 Score: 156 bits (395), Expect = 5.510e-40 Identity = 89/249 (35.74%), Postives = 130/249 (52.21%), Query Frame = 1
Query: 10 RKMAISALDWCRMSDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMR-----GTRPARRAG-AVTH--------EGRPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVSDADFSLKRDNG 714
+K+ + +W R+S + + A + L + R P+GL++ P LSE+G+ G + LE+H+D ++ + + SKT+AGEW A AGGSHLQ +W TNP Y ++ P +R+ L+RP W ++ D VG MMGFY+ R GT P+ + H E P+ +SPF P H V TP F LD E+ + I+PAT G+ GPF +SV SD DF+L G
Sbjct: 685 KKIGLYPSEWHRLSSFGNETVAVLHLPTLVRSKFPHGLVITPCLSERGISGQYVLELHADCPTTLEMISASKSKTLAGEWTARHAGGSHLQP-SWSTNPIYRVRFADPTARPRVRVDLTRPAEYWNSS---DVVGRMMGFYIHRADGPNGTGPSLDPDHCIMHVDPNLKDVEPEPYTQSPFTPLHTVQTPQAFRLD---------------KSEDPFLIVPATYAPGQTGPFFLSVTSDVDFTLTAAQG 914
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: D0ND88_PHYIT (Calpain catalytic domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0ND88_PHYIT) HSP 1 Score: 140 bits (354), Expect = 1.780e-34 Identity = 91/259 (35.14%), Postives = 129/259 (49.81%), Query Frame = 1
Query: 1 LPDRKMAISALDWCRMSDYQSTEAATILLRGVRRD-------------TAPNGLLVVPALSEKGVKGAFTLEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTPGVA-VPIRITLSRPERDWRAACAADTVGCMMGFYLMRG-----TRPARRAGA----VTHEGRPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVSDADFSLKRD 708
+P K+ + +WCR+S Y S +A + LR V ++ + GLL+VP L E G +G+F L+V D + V ELP+ AG NP ++L+I+ GV +RITL+R ER+W++ C D+VG M+GFYL+RG RPA GA + GRPW E+ FVP HAVS+P VL G + I+P T E G+LG F++SV D +F+L D
Sbjct: 844 IPTPKLVVKPTEWCRLSSYASPASACLFLRKVPKEWLLASDSPSSVNSSGGGGLLLVPTLGEAGAEGSFELQVDCDFPLLVDELPK-------------GAGA----------NPKFYLQIQ--GVRPTKVRITLTRSEREWKSRCQRDSVGTMIGFYLLRGGSSKLVRPAEEGGANSNPIVINGRPWSETDFVPLHAVSSPPDLVLSAAAKGG--------------FVIVPTTYEPGRLGKFVLSVQCDTEFTLTCD 1063
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Match: A0A7S3MDN1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDN1_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.450e-33 Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 1
Query: 172 LEVHSDRRVEVQELPETSSKTVAGEWAAHSAGGSHLQTDTWKTNPCYFLKIRTP---GVAVPIRITLSRPERDWRAACAADTVGCMMGFYLMRGTRPARRAGAVTHEG--RPWDESPFVPTHAVSTPAGFVLDGPPVGDEAGXXXXXXXXEEVYTIMPATLESGKLGPFLISVVSDADFSLKRD 708
+EV++ ++ + LPET S+++AGEW +++GG+HL TWK NP + LK P A +RITL+R +WR+ DTVGCM+GFY+ + H G RP+ ES FVP +ST F+L PV E YTIMP T GK+G F+IS++S+ +F++ +D
Sbjct: 1 MEVYASEKIYLNALPETYSRSIAGEWVDNASGGNHLNPGTWKKNPKFSLKFHYPVHSEDAAHVRITLARVGTNWRSLSKRDTVGCMIGFYIF-----------INHGGELRPYYESTFVPDAEISTDPSFML---PVLQHG----------ETYTIMPTTFGEGKVGSFVISILSEYEFAITKD 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12399.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12399.1.1 >prot_P-wetherbeei_contig12399.1.1 ID=prot_P-wetherbeei_contig12399.1.1|Name=mRNA_P-wetherbeei_contig12399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp MAISALDWCRMSDYQSTEAATILLRGVRRDTAPNGLLVVPALSEKGVKGAback to top mRNA from alignment at P-wetherbeei_contig12399:154..1475+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12399.1.1 ID=mRNA_P-wetherbeei_contig12399.1.1|Name=mRNA_P-wetherbeei_contig12399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1322bp|location=Sequence derived from alignment at P-wetherbeei_contig12399:154..1475+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12399:154..1475+ >mRNA_P-wetherbeei_contig12399.1.1 ID=mRNA_P-wetherbeei_contig12399.1.1|Name=mRNA_P-wetherbeei_contig12399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig12399:154..1475+ (Phaeothamnion wetherbeei SAG_119_79)back to top |