mRNA_P-wetherbeei_contig12375.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12375.2.1
Unique NamemRNA_P-wetherbeei_contig12375.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7W0KD43_9CHLR (Glucarate dehydratase n=2 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0KD43_9CHLR)

HSP 1 Score: 602 bits (1553), Expect = 5.010e-213
Identity = 298/450 (66.22%), Postives = 347/450 (77.11%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            M I  M VTPVA+ADAPLRN+ G+HEPYVNR+IVELVG+DG SGFGEA++ST++Y DL  LR  I+G DA N N+LYEIV  H+                D +++ DP LK FDL+P ++ +ALPRTFSPIEVAALDL G++LGLPVAE+LGGRVRDA PFSAYLFYK+ GGGGEG+D RED+YGEA+TP+ +V QAR  IDRYGFRSIKLKAGVF P  E +AI ALR AFG  +PLRIDPN AWTV+TS+ VG+ L   LEYFEDPT GI GMAAVRRGLLA+GID+PNATNMCVT+F  IPES  +DAVQVILGDHHYWGGLRA VELGRICST+ +G+SMHSNS                P LTYDADTHYPWL   D+I+ GG + F DG V VP  PGLGIEIDRDALARG +RF RIPYRDRDD  +MR+  DP +E++LPRW
Sbjct:    1 MNIADMIVTPVAIADAPLRNAPGIHEPYVNRLIVELVGDDGESGFGEAAWSTQMYEDLQRLRPEIIGCDAANQNRLYEIVAHHL--------------DADPENRPDPVLKNFDLSPAKVKTALPRTFSPIEVAALDLTGRSLGLPVAELLGGRVRDAVPFSAYLFYKHVGGGGEGEDAREDVYGEAMTPEGVVAQARKMIDRYGFRSIKLKAGVFPPDEEIEAIRALRAAFGTGVPLRIDPNTAWTVETSVHVGKELATDLEYFEDPTFGIGGMAAVRRGLLAEGIDIPNATNMCVTAFPHIPESVREDAVQVILGDHHYWGGLRATVELGRICSTFGIGMSMHSNSHLGVSLMAMTHLAAAIPNLTYDADTHYPWLDEGDEIIAGGKVAFHDGCVAVPVDPGLGIEIDRDALARGHDRFQRIPYRDRDDAGHMRRTVDPAWERKLPRW 436          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A6J4VCZ2_9CHLR (Mandelate racemase family protein Pfl_3283 n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VCZ2_9CHLR)

HSP 1 Score: 525 bits (1352), Expect = 1.740e-182
Identity = 270/450 (60.00%), Postives = 313/450 (69.56%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            MKI  M VTPVA+AD PLRNS GVHEPY  R IVELVGEDGRSGFGE        A L  +R+ +VG DAL+T  +   + A +              G+  D  AD A +  DLTP R  +A  RTFSPIEVAALDL G+ALG PV ++LGG VRDA PFSAYLFYK+AGGGGE  D R D YGEALTP+ +V QAR  +  YGF+S+KLKAGV +P  E   I  LRDAFGP++PLRIDPN AWTV+TS+AVG  L   LEY EDPTP I GMA VRR LLA+GI +P ATNM VT + D+PES   DAVQVILGDHHYWGGLRAV +LGR+C T+ LGLSMHSN+               TP LTYD DTHYPWL P DD++  G I F  GA+ VP  PGLG+E+DRDALARG ER+ R+PYRDRDD   MR+ YDP +E R+PRW
Sbjct:    1 MKIVDMKVTPVAIADPPLRNSTGVHEPYALRAIVELVGEDGRSGFGETGCGKGTVAALEGMRDLVVGGDALHTTTVERAIAARLG-------------GLPVD-PADVARQHLDLTPTRPTTAAQRTFSPIEVAALDLAGKALGRPVCDLLGGAVRDAVPFSAYLFYKHAGGGGEDGDARPDRYGEALTPEAMVAQARAMVAEYGFKSVKLKAGVLDPDEEVRTIRLLRDAFGPDVPLRIDPNCAWTVETSLAVGRALADALEYLEDPTPTIPGMAEVRRRLLAEGIAMPLATNMAVTKWSDVPESVRVDAVQVILGDHHYWGGLRAVAQLGRLCETFGLGLSMHSNTHLGISLMAMVHLAAATPHLTYDCDTHYPWLDPADDVLAAGSITFEVGAIRVPAGPGLGVEVDRDALARGHERYLRVPYRDRDDVGEMRRRYDPAWEPRIPRW 436          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7V9KJ45_9CHLR (Glucarate dehydratase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9KJ45_9CHLR)

HSP 1 Score: 506 bits (1303), Expect = 2.440e-175
Identity = 261/450 (58.00%), Postives = 309/450 (68.67%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            M I+ M +TP+A+AD P+RNS GVHEPY  R IVELVGEDG SG+GE +  T   A+L  +R+ ++G +AL+ N+L   VTA +                      DP              A  R FS +EVAA DL GQALG+PV E+LGGR RD  PFSAYLFYKYAGGGGE  D R D +GEALTP Q+V QA+DF+  +GF SIKLKAGVFEP +E + +  LRDAFGP MPLRIDPN AWTV TSI +G  L GTLEYFEDPT GIDGMAAV+RGLLA G++LP ATNMCV  F+ IP +  +DAVQVILGDHH+WGGLRAVVELGRIC T+ +G+SMHSNS               TP LTYD DTHYPW    D+++ GG +  VDGA+ VP  PGLGIE+DRDALARG ER+ R+PYRDR D   MR+ YDP +  RLPRW
Sbjct:    1 MNIRDMKITPIAVADPPVRNSSGVHEPYALRTIVELVGEDGLSGWGEITCVTDTVAELERVRDLVIGREALDLNRLRRDVTARLGN--------------------DPR-------------AGARIFSALEVAAFDLAGQALGVPVCELLGGRARDRVPFSAYLFYKYAGGGGEHGDERADRWGEALTPRQLVAQAKDFVATHGFTSIKLKAGVFEPAIEIETMRQLRDAFGPAMPLRIDPNCAWTVATSIEIGTALAGTLEYFEDPTGGIDGMAAVQRGLLAAGVELPLATNMCVVRFEQIPPAVREDAVQVILGDHHFWGGLRAVVELGRICETFGIGMSMHSNSHLGVSLMAMVHLAAATPWLTYDCDTHYPWQDEADELLVGGKVPIVDGAIAVPDRPGLGIEVDRDALARGHERYLRVPYRDRRDDHEMRRKYDPAWVTRLPRW 417          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7V8VXY6_9CHLR (Glucarate dehydratase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8VXY6_9CHLR)

HSP 1 Score: 462 bits (1188), Expect = 1.030e-158
Identity = 234/377 (62.07%), Postives = 278/377 (73.74%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPW 1131
            MKI  M VTPV++ADAPLRNS+G+HEPYV R++VELV EDG SGFGE+++ST++ ADL ++RE I G DAL   ++ +I+   +                D+    D  L+ FDLTPRR  +A+ RTFSPIEVA+LDL GQ+ G+PV ++LGGRVRDA PFSAYLFYK+AGGGGEGDD R+DIY EA+T + IV QA+  I  YGF SIKLK GV  P  E +AI ALR AFGP+MPLRIDPN AWTV+TS+ V + L   LEYFEDPTPGIDGM+AVR  LLA GIDLP ATNM VTS+ +I ES AKDAVQVILGDHHYWGGLRA+VELGR+C T+ +GLSMHSNS               TP LTYDADTHYPW
Sbjct:    1 MKIVEMKVTPVSIADAPLRNSIGIHEPYVGRIVVELVSEDGISGFGESAFSTQMLADLESVREVIAGHDALEITRVRQIIDGRLHS--------------DSRDSLDGVLQAFDLTPRRKTTAVERTFSPIEVASLDLAGQSFGVPVCDLLGGRVRDAVPFSAYLFYKHAGGGGEGDDARDDIYPEAMTSEAIVAQAKAMIAEYGFPSIKLKGGVLPPDDEIEAIQALRAAFGPDMPLRIDPNCAWTVETSVRVAKALARELEYFEDPTPGIDGMSAVRAALLADGIDLPLATNMAVTSYAEIQESVAKDAVQVILGDHHYWGGLRAIVELGRLCETFGMGLSMHSNSHLGISLMAMTHVAAATPNLTYDADTHYPW 363          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7V8WTA3_9CHLR (Glucarate dehydratase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8WTA3_9CHLR)

HSP 1 Score: 451 bits (1161), Expect = 1.270e-153
Identity = 242/450 (53.78%), Postives = 297/450 (66.00%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            M+I  +NVTP+A+AD PL NS G+H+PY  R IVELVGEDG SG+GE +   ++       R+ +VG  A    +L   +T +   PDA               Q +  + + +  P     A  R FS +EVAAL L G++LG+PV ++LGGRVRD  PFSAYLFYK AGGGGE DD R+D +GEALTPD +V QA+  I RYGF S+KLKAG F P  E  A++ LR+A GP++PLRIDPNAAWTVDTS+AV   L  TLEY EDPTPG+ GM  V   L A+G+ +P ATNM VT+FDDIPES    AV VILGDHHYWGGLRAV  LG +C T  LGLSMHSNS               TP LTY  DTHYPW +  D+I+ GG +  VDGAV VP+TPGLGIEIDRDALARG+ERF+R    +RDD + M++  DP ++   PRW
Sbjct:    1 MRIAELNVTPIAIADPPLLNSNGLHQPYALRTIVELVGEDGISGWGECAGGRRMLDAFEGSRQHVVGRSAFELTRLQLALTGNA--PDAT--------------QHETLMGRMNPLP-----AARRVFSGVEVAALHLIGKSLGVPVCDLLGGRVRDRVPFSAYLFYKLAGGGGEVDDARDDEWGEALTPDGVVAQAQAMITRYGFGSVKLKAGAFPPDEEIAAMLVLRNALGPDVPLRIDPNAAWTVDTSVAVALALAETLEYLEDPTPGMAGMGEVHDRLAAEGLRMPLATNMVVTAFDDIPESLRLRAVDVILGDHHYWGGLRAVSHLGTLCHTLGLGLSMHSNSHLGISLLAMTHVAAATPHLTYACDTHYPWQHEADEILVGGKVPIVDGAVVVPSTPGLGIEIDRDALARGRERFERGGIAERDDVSEMQRRVDPAWQHIQPRW 429          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7W1DX11_9CHLR (Glucarate dehydratase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W1DX11_9CHLR)

HSP 1 Score: 434 bits (1115), Expect = 1.490e-146
Identity = 226/445 (50.79%), Postives = 276/445 (62.02%), Query Frame = 1
Query:   16 MNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            M VTPVAMAD PL +S G+H PY  R +VELV +DG +G  E     +        RER++G D  +   L+  + A      A       A+G     Q         L     +    R F  +EVAALDL G+A G PV ++LGGR+RDA PFSAYLFYK AGGGG G D R D +GE +TP+ +V +AR  ID YGF SIKLK GV  P  E  A+ AL DA GP +PLRIDPN AWTVDTS+ VG +L GTLEY EDPT G+ GM AVR+ LL  GI+ P A+N  VT+F D+P     D+ QVIL DHHYWGGLRA   LG++C  + LGLSMHSNS               TP LTY +DTHYPW    D+I++GG + FVDG+VPVP  PGLG E+DRDALARG+ER++   YR RDD   MR+  DP + + LPRW
Sbjct:    1 MRVTPVAMADPPLLSSYGLHAPYALRTVVELVSDDGITGAAETHGGERTLEQFERARERVIGRDPYDLAHLHHELDAMFG---ASAPLPATASGTTLPQQT------LVLPGESASDIALRIFGALEVAALDLIGKATGRPVCDLLGGRIRDAVPFSAYLFYKRAGGGGAGSDARADAWGEVMTPEAVVAEARQMIDTYGFGSIKLKGGVLPPDEEIAAMEALHDALGPSVPLRIDPNCAWTVDTSVRVGRKLAGTLEYLEDPTAGLAGMTAVRQALLGFGIETPLASNNAVTAFADLPAVVRGDSAQVILADHHYWGGLRAATHLGQLCQAFGLGLSMHSNSHLGLSLLAMVHFAAATPHLTYASDTHYPWQDATDEILEGGRVTFVDGSVPVPAAPGLGAELDRDALARGRERYEACGYRSRDDEAEMRRHVDPNWRRTLPRW 436          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7W0NA40_9CHLR (Glucarate dehydratase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0NA40_9CHLR)

HSP 1 Score: 433 bits (1113), Expect = 3.680e-146
Identity = 230/450 (51.11%), Postives = 282/450 (62.67%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            MKI  M +TP+AMAD PL +S G+H PY  R +VELV EDG +G  E         DL   R  +VG DA +  +L+  V      P                    P   + D        A  R ++ IEVAALDL G+A+G+PV ++LGGRVRD  PFSAYLF+K+AGGGG G+D R+D  GEAL P  IV+QA+     YGF S+KLK GV  P  E  AI+ALRDA GP +PLRIDPNAAWT  T+I VG  L G LEY EDPTPG+ GMA VRRGLL  G   P A+N  VTSF D+PE+     VQVIL DHHYWGG RA+ +LGR+C+T+ +GLSMHSNS               TP LTY +DTHYPW    D+I+ GG +RF  GAV VPTTPGLG E+D DALARG+ER+++  YR+RDD   MR+  DP + + +PRW
Sbjct:    1 MKIVDMRLTPIAMADPPLLSSYGLHAPYALRTVVELVSEDGLTGAAETHGGEGPLGDLERARPLVVGRDAFDLARLWSAVGGDSVDPPVEELPERGGPAYPTQTYTLPGEGRLD--------APLRVYAAIEVAALDLIGKAVGVPVCDLLGGRVRDEVPFSAYLFFKHAGGGGLGEDSRKDRLGEALDPRAIVEQAKWMTAAYGFDSVKLKGGVLPPEREIAAILALRDALGPTIPLRIDPNAAWTAATAIQVGTALTGALEYLEDPTPGLAGMAEVRRGLLDAGDATPLASNTSVTSFADVPEAIRSGGVQVILSDHHYWGGPRAITQLGRLCATFGIGLSMHSNSHLGLSLLTMVHLAAATPHLTYASDTHYPWQDAADEIIVGGRVRFAGGAVRVPTTPGLGAELDGDALARGRERYEQCGYRNRDDEAEMRRHIDPAWRRVVPRW 442          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A350ER80_9BACT (Glucarate dehydratase n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A350ER80_9BACT)

HSP 1 Score: 425 bits (1093), Expect = 2.790e-143
Identity = 221/453 (48.79%), Postives = 290/453 (64.02%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLE---YFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            M+I  + +  +A+AD PLR+S G H+PY  R I+EL+ EDG  G  E     +    LLA+R++++G DA    ++   +++ +  P          +G  +     P     D T         RTF+ IEVA LDL G+ +G PV +++GGRVRD  PFSAY FYK+AGGGGEGDD RED +GEALTP+ + +Q    I+ YGF+ IK KAGV EP +E + +  +R AFGP++P+RIDPN+AWTV+TSI VGE L   L    Y EDPT GIDGMAAVRRGL+  GID P A+N+ VT F DIPE+   DAVQVIL DHHYWGG+R V +L R+C T+ +GLSMHSN+               TP LTY  DTHYPW   +D++V GG +  V+G V +P  PGLG+E+D D LAR KER+++ PYR RDD   MRK  DP +++ LPRW
Sbjct:    1 MRIADLRIHSIAVADPPLRSSYGRHQPYALRTIIELISEDGVIGINETYGGEEPKKALLAVRDQLIGRDAF---RVTGFLSSLVEGP----------SGDRSQTMHVPGENPLDAT--------TRTFAAIEVACLDLIGKTIGQPVCDLIGGRVRDEVPFSAYPFYKHAGGGGEGDDAREDEFGEALTPESLTRQVARMIELYGFKDIKFKAGVLEPDLEIETVKEMRRAFGPDVPIRIDPNSAWTVETSIRVGETLRDELAGGGYLEDPTAGIDGMAAVRRGLIKLGIDTPLASNVAVTCFADIPEAVRHDAVQVILCDHHYWGGMRQVQQLARLCKTFGIGLSMHSNNHLGVSLMGMAHVAAATPHLTYACDTHYPWQTAQDEVVLGGRVPIVNGCVKIPDKPGLGVELDHDQLARLKERYEKCPYRKRDDEAEMRKHVDPGWKRILPRW 432          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7X4AMP1_9BACT (Glucarate dehydratase n=2 Tax=Bacteria TaxID=2 RepID=A0A7X4AMP1_9BACT)

HSP 1 Score: 422 bits (1086), Expect = 3.420e-142
Identity = 227/454 (50.00%), Postives = 281/454 (61.89%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQAD-PALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLE---YFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            MKI  M V  +AMAD PLR+S G+H PY  R ++EL  EDG  G  E     K  A L   RER++GA+       Y +        D L       +G+D       P     D +         RT++ IE A LDL G+A+G PV +++GGRVRD  PFSAY FYK+AGGGGEGDD RED YGEAL+P+ +V+Q +   D YGF S+K K GVF+P +E + I  LR  FGP +PLRIDPN+AWTV+TSI VG  L   L    Y EDP  GIDGMAAVR GLLA+ +D P A+N+ VTSF  IPES  K+AVQVIL DHHYWGG+R V  LG+IC  + +GLSMHSNS               T  LTY  DTHYPW   +D+IV GG I  V+G V +P  PGLG+++D D +ARGK  F+++PYR RDD   MRK  DP +E+ LPRW
Sbjct:    1 MKIVDMRVHSIAMADPPLRSSYGLHAPYALRNVLELESEDGLVGIAETYGGEKPAAALREARERVIGANP------YRLTG------DLLGFVEDEGSGLDRSQTYHVPGENPLDTS--------SRTYAAIETACLDLIGRAVGQPVCDLIGGRVRDEVPFSAYPFYKHAGGGGEGDDAREDKYGEALSPETLVRQVKQMFDEYGFGSVKFKGGVFDPEIEVETIRQLRQEFGPSVPLRIDPNSAWTVETSIKVGRDLKQELSGGGYLEDPAMGIDGMAAVRAGLLAEDVDTPLASNVAVTSFAHIPESVKKEAVQVILCDHHYWGGMRQVQHLGKICQVFGIGLSMHSNSHLGVSLMAMTHAAAATKHLTYACDTHYPWQSEKDEIVAGGRIPIVNGCVKIPDKPGLGVDLDYDQIARGKALFEKLPYRKRDDQAEMRKHVDPNWERVLPRW 434          
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Match: A0A7W0A4G5_9CHLR (Glucarate dehydratase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A4G5_9CHLR)

HSP 1 Score: 419 bits (1078), Expect = 4.540e-141
Identity = 223/450 (49.56%), Postives = 270/450 (60.00%), Query Frame = 1
Query:    1 MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASYSTKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALXXXXXXATGVDADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEMLGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDFIDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDTSIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSFDDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSXXXXXXXXXXXXXXXTPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVPTTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW 1350
            M+I A+  TP+A AD PL N  G+H+PY  R IVE+  ++G  GFGE +   ++          ++G DA N   + +++                  G D  HQ  P +   D   R +       +S IEVA LD+ GQALGLPV  +LGG+ RD   FSAYLFYK+ GGGG  DD+R+DIYG AL PD IV+QAR  ID YGFRS+KLK G F P  E D + AL  AFG  +PLRIDPN AWTV+TS+ VG  LDG LEY EDP PG+D M+AVR  L+ +G+  P ATNM VT F+ I E+  KDA Q+IL DHH WGGL+A  ELGR+C  +  GLSMHSNS               TP LTY  DTHYPW   ED+I+QGG I F DGAV  P  PGLGIEIDRD LAR  ER       +RDD  YMR   DPT+     RW
Sbjct:    1 MRITAITATPIAFADPPLLNFAGLHQPYALRTIVEVETDEGIPGFGEVAGGEQMQKAFRLAIPDLIGMDAFNRQAIRQLIIG--------------GEGSDDTHQIMPGVA--DQRRREL------VYSGIEVALLDIAGQALGLPVHALLGGKARDTVDFSAYLFYKHEGGGGSDDDIRDDIYGPALDPDGIVRQARALIDEYGFRSVKLKGGAFPPEQEMDTMRALHGAFGDGVPLRIDPNGAWTVETSVKVGVELDGILEYLEDPAPGMDSMSAVRGDLITRGVMTPLATNMIVTRFERIAEAYEKDACQIILSDHHIWGGLQATHELGRLCEAFSFGLSMHSNSHLGISLMAMVHVAAATPALTYACDTHYPWQRAEDEIIQGGRIAFEDGAVRAPDAPGLGIEIDRDNLARLHERCRACGIAERDDAAYMRNRVDPTFSPDPARW 428          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12375.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W0KD43_9CHLR5.010e-21366.22Glucarate dehydratase n=2 Tax=Chloroflexia bacteri... [more]
A0A6J4VCZ2_9CHLR1.740e-18260.00Mandelate racemase family protein Pfl_3283 n=1 Tax... [more]
A0A7V9KJ45_9CHLR2.440e-17558.00Glucarate dehydratase n=1 Tax=Chloroflexia bacteri... [more]
A0A7V8VXY6_9CHLR1.030e-15862.07Glucarate dehydratase (Fragment) n=1 Tax=Chlorofle... [more]
A0A7V8WTA3_9CHLR1.270e-15353.78Glucarate dehydratase n=1 Tax=Chloroflexia bacteri... [more]
A0A7W1DX11_9CHLR1.490e-14650.79Glucarate dehydratase n=1 Tax=Chloroflexia bacteri... [more]
A0A7W0NA40_9CHLR3.680e-14651.11Glucarate dehydratase n=1 Tax=Chloroflexia bacteri... [more]
A0A350ER80_9BACT2.790e-14348.79Glucarate dehydratase n=1 Tax=Verrucomicrobiales b... [more]
A0A7X4AMP1_9BACT3.420e-14250.00Glucarate dehydratase n=2 Tax=Bacteria TaxID=2 Rep... [more]
A0A7W0A4G5_9CHLR4.540e-14149.56Glucarate dehydratase n=1 Tax=Chloroflexia bacteri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12375contigP-wetherbeei_contig12375:101..1453 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1340493.JNIF01000004_gene416
Preferred namegudD
PFAMsMR_MLE_C,MR_MLE_N
Model size1353
Max annot lvl2|Bacteria
KEGG rclassRC00543
KEGG koko:K01706
KEGG ReactionR02752,R08056
KEGG Pathwayko00053,ko01100,map00053,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.9e-136
EggNOG OGsCOG4948@1|root,COG4948@2|Bacteria
EC4.2.1.40
Descriptioncarboxylic acid catabolic process
Cds size1353
COG categoryM
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185947.0582178-CDS-P-wetherbeei_contig12375:100..14531683185947.0582178-CDS-P-wetherbeei_contig12375:100..1453Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12375 101..1453 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12375.2.1prot_P-wetherbeei_contig12375.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12375 101..1453 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12375.2.1

>prot_P-wetherbeei_contig12375.2.1 ID=prot_P-wetherbeei_contig12375.2.1|Name=mRNA_P-wetherbeei_contig12375.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=451bp
MKIQAMNVTPVAMADAPLRNSVGVHEPYVNRVIVELVGEDGRSGFGEASY
STKLYADLLALRERIVGADALNTNKLYEIVTAHIAPPDALPDALPDATGV
DADHQADPALKQFDLTPRRINSALPRTFSPIEVAALDLGGQALGLPVAEM
LGGRVRDAAPFSAYLFYKYAGGGGEGDDLREDIYGEALTPDQIVQQARDF
IDRYGFRSIKLKAGVFEPMVEADAIVALRDAFGPEMPLRIDPNAAWTVDT
SIAVGERLDGTLEYFEDPTPGIDGMAAVRRGLLAKGIDLPNATNMCVTSF
DDIPESNAKDAVQVILGDHHYWGGLRAVVELGRICSTYHLGLSMHSNSHL
GVSLMAMTHLAAATPGLTYDADTHYPWLYPEDDIVQGGPIRFVDGAVPVP
TTPGLGIEIDRDALARGKERFDRIPYRDRDDTTYMRKVYDPTYEKRLPRW
*
back to top

mRNA from alignment at P-wetherbeei_contig12375:101..1453+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12375.2.1 ID=mRNA_P-wetherbeei_contig12375.2.1|Name=mRNA_P-wetherbeei_contig12375.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1353bp|location=Sequence derived from alignment at P-wetherbeei_contig12375:101..1453+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCCAGGCAATGAACGTCACGCCGGTCGCGATGGCCGACGCGCC ACTGCGCAACTCGGTCGGCGTCCACGAGCCGTACGTGAACCGCGTGATCG TGGAGCTGGTCGGGGAGGATGGGCGGAGCGGCTTCGGCGAGGCATCGTAC TCCACGAAGCTGTACGCGGACCTGCTGGCGTTGCGCGAACGGATCGTCGG CGCGGACGCGCTGAACACCAACAAGCTCTACGAGATCGTCACCGCCCACA TCGCGCCGCCCGACGCGCTGCCCGACGCGTTGCCCGACGCGACAGGGGTG GATGCCGACCACCAAGCCGACCCCGCGCTGAAGCAGTTCGACCTGACGCC CCGGCGCATCAACAGCGCCCTCCCGCGCACCTTCAGCCCGATCGAGGTCG CCGCGCTCGACCTCGGCGGGCAGGCGCTCGGATTGCCGGTCGCGGAGATG CTCGGGGGCCGCGTGCGGGATGCCGCGCCCTTCTCCGCCTACCTCTTCTA CAAGTACGCGGGCGGCGGTGGCGAGGGGGACGACCTGCGGGAGGACATCT ACGGTGAGGCGCTGACGCCGGACCAGATCGTGCAGCAGGCGCGGGACTTC ATCGACCGTTACGGATTCAGGAGCATCAAGCTGAAGGCGGGCGTCTTCGA GCCGATGGTGGAGGCCGATGCGATCGTCGCCCTGCGCGATGCCTTCGGGC CGGAGATGCCGCTGCGGATCGACCCGAACGCCGCCTGGACGGTGGACACC TCGATCGCGGTCGGGGAGCGGCTGGACGGAACCCTGGAATACTTCGAGGA CCCGACACCGGGCATCGACGGCATGGCCGCTGTGCGCAGGGGACTGCTGG CGAAGGGGATCGACCTCCCGAACGCGACCAACATGTGCGTCACCAGCTTT GATGACATCCCGGAGTCGAACGCGAAGGACGCCGTGCAGGTCATCCTCGG CGATCATCATTACTGGGGCGGCCTGCGCGCCGTCGTGGAGCTGGGCCGCA TCTGCTCGACCTACCACCTCGGCCTGAGCATGCACTCCAACTCCCACCTC GGGGTCTCGCTGATGGCGATGACGCACCTCGCCGCCGCCACGCCTGGCCT GACCTACGACGCGGACACGCACTATCCGTGGCTCTACCCGGAGGACGACA TCGTGCAGGGCGGTCCGATCCGCTTTGTGGACGGCGCGGTGCCGGTGCCG ACGACGCCCGGCCTGGGGATCGAGATCGACCGCGACGCCCTCGCGCGGGG CAAGGAGCGCTTCGACCGCATCCCCTACCGCGACCGCGACGACACGACCT ACATGCGCAAGGTCTACGACCCGACCTACGAGAAGCGCCTCCCCCGATGG TAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12375:101..1453+

>mRNA_P-wetherbeei_contig12375.2.1 ID=mRNA_P-wetherbeei_contig12375.2.1|Name=mRNA_P-wetherbeei_contig12375.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1353bp|location=Sequence derived from alignment at P-wetherbeei_contig12375:101..1453+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCCAGGCAATGAACGTCACGCCGGTCGCGATGGCCGACGCGCC
ACTGCGCAACTCGGTCGGCGTCCACGAGCCGTACGTGAACCGCGTGATCG
TGGAGCTGGTCGGGGAGGATGGGCGGAGCGGCTTCGGCGAGGCATCGTAC
TCCACGAAGCTGTACGCGGACCTGCTGGCGTTGCGCGAACGGATCGTCGG
CGCGGACGCGCTGAACACCAACAAGCTCTACGAGATCGTCACCGCCCACA
TCGCGCCGCCCGACGCGCTGCCCGACGCGTTGCCCGACGCGACAGGGGTG
GATGCCGACCACCAAGCCGACCCCGCGCTGAAGCAGTTCGACCTGACGCC
CCGGCGCATCAACAGCGCCCTCCCGCGCACCTTCAGCCCGATCGAGGTCG
CCGCGCTCGACCTCGGCGGGCAGGCGCTCGGATTGCCGGTCGCGGAGATG
CTCGGGGGCCGCGTGCGGGATGCCGCGCCCTTCTCCGCCTACCTCTTCTA
CAAGTACGCGGGCGGCGGTGGCGAGGGGGACGACCTGCGGGAGGACATCT
ACGGTGAGGCGCTGACGCCGGACCAGATCGTGCAGCAGGCGCGGGACTTC
ATCGACCGTTACGGATTCAGGAGCATCAAGCTGAAGGCGGGCGTCTTCGA
GCCGATGGTGGAGGCCGATGCGATCGTCGCCCTGCGCGATGCCTTCGGGC
CGGAGATGCCGCTGCGGATCGACCCGAACGCCGCCTGGACGGTGGACACC
TCGATCGCGGTCGGGGAGCGGCTGGACGGAACCCTGGAATACTTCGAGGA
CCCGACACCGGGCATCGACGGCATGGCCGCTGTGCGCAGGGGACTGCTGG
CGAAGGGGATCGACCTCCCGAACGCGACCAACATGTGCGTCACCAGCTTT
GATGACATCCCGGAGTCGAACGCGAAGGACGCCGTGCAGGTCATCCTCGG
CGATCATCATTACTGGGGCGGCCTGCGCGCCGTCGTGGAGCTGGGCCGCA
TCTGCTCGACCTACCACCTCGGCCTGAGCATGCACTCCAACTCCCACCTC
GGGGTCTCGCTGATGGCGATGACGCACCTCGCCGCCGCCACGCCTGGCCT
GACCTACGACGCGGACACGCACTATCCGTGGCTCTACCCGGAGGACGACA
TCGTGCAGGGCGGTCCGATCCGCTTTGTGGACGGCGCGGTGCCGGTGCCG
ACGACGCCCGGCCTGGGGATCGAGATCGACCGCGACGCCCTCGCGCGGGG
CAAGGAGCGCTTCGACCGCATCCCCTACCGCGACCGCGACGACACGACCT
ACATGCGCAAGGTCTACGACCCGACCTACGAGAAGCGCCTCCCCCGATGG
TAG
back to top