mRNA_P-wetherbeei_contig1237.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1237.2.1 vs. uniprot
Match: D7G628_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G628_ECTSI) HSP 1 Score: 367 bits (943), Expect = 1.810e-105 Identity = 298/867 (34.37%), Postives = 434/867 (50.06%), Query Frame = 1
Query: 2386 LAERERRRAAAARIQRRYRSHRWWKHRIRRARLEEQALRRLYFLREYAQIRIADWWRVVCVQCMRRA----------------ASRAXXXXXXXXXXXXXXXXGCAARNLLHLFKRRRARARCAWRRIVNRARWAPTRVEVVRLQRLMRRYLRRRRRGSAATEIQRVWRGCLGRRAATERLARTYMERAVDIQRVFRGYWARCRVYAPAKCRGAAARCLQRFFRGCAAAARMRKVVLQQKLQRACREKVQRTQLLARRAQDTVKRMATAKRDAAARQIQAAARLWLGWRREARRLATAAEALAAEKEE-LAQRSALLEEKKKEHARVARDR--ARGIGGAL----RTFNRLTSGEFGGHRPLDAFLQDSPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADEREMLANSILNHQTSSTLQRGIVALHLTRGGTERRAFEEVQQYKRRTKAPYFELIDGGDLTGPARRKVYLWAQRGVGEGVFSDVRLERPPAGHA-TAVDSVRKARQQAAVQGGCALVSHPRVPVELVCRFTRRGVASAPAVDEIRACLGTPSEPGGXXXXRLEEEAGALKAAGFVKLRPNLSKFGLGAGHLWVHSKSFKKRPAALVQTRQRLREHAWFTDRTLLLAEKYALTDDDILALHAAFQRTDYFGDGCMETTVFYQLAGQPPSLFGRWLFAAADVRGARGGAGFGVPRXXXXXXXXXXXXNDSIGSDVPRLMWDELLAAVCLFGLFGRRELLRFVFGALDPGRSGWIDGDAFASFVGAAVGVDPSLPRNVPLLTRRAFERAAAAGIGPDGVARLDFPRFDRLCGQFPRVVFPLLQLRDNLAEHFMGTEFWESKKALFVNARQELGVQ 4914
+AE ERR AAA IQR +R++ WK +R RL+EQ +R F REYAQ+ +A WWR V V+ +R A R R L K++ RC WRRI + P + R+Q ++RR++RRR+R AAT+IQRV+RG RR +LAR Y A++IQRV RG+ AR A+R + + R +V + + +RA E++QR L+ +RA+ T+++ ++ AA+ IQ+ R RR+A R A L E ++ LA L ++K +E ++ R A+ +GG L R N+LT+ E D A XXXXXXXX A + ++LANSILNHQT+S LQ GI +H+T G E +AF E Q Y + TK + ++G DL+G + V LW + G G+GV +DV++ + P HA +AV VRK Q A + LV H R +EL+C+ R APAVD++ C P++ G EA L G+ ++ P L GLG G L++H K+ K RP L + RLR+ WFT RT LL EKYAL++++++ALHA F TD+ G+ M+ F+ G+ + +G WL A GAG G + WD+ L VC F +F RRE+LRF FG+LDPG G++D F F+ A + +P N +R F R A +G +LDFP+F++LC Q+PR+ P+ +L+ + +H +G FW+ K+ +F NAR +GV+
Sbjct: 12 MAELERRIIAAATIQRGWRNYFRWKWMMRDVRLKEQEFKRQGFRREYAQMELAFWWRRVRVKHFKRTVLRQLMVARKAVNVIKARRGADGLILQRSSIARAYRSYMVRTLAVRAKKKAIAMRCRWRRIYLGIKRLPRPEDTARIQMILRRFIRRRKRNKAATDIQRVYRGVQARRIYVVKLARMYTINAINIQRVGRGHIARRGEVRDVLEANHASRVITKALHTYIRNKAFRDMVKETRARRARFERLQREALIRQRAEATLRQAFLMNQEKAAKAIQSRWR-----RRQANRRREEARLLQVEMDQRLALDKKLRQKKIEELKKLQRSASPAKKVGGVLSALGRKLNKLTAQE------------DPELATEDHIAIEEDXXXXXXXXKSSATTLLGKMRGMTEEEKAENAKQDTDVLANSILNHQTNSNLQVGICGIHVTVGKKEEKAFMEAQDYLKATKQEHMAAVEG-DLSGKKQLNVRLWLKMGQGDGVVTDVKIHKAPPNHANSAVAKVRKKEAQLASR---MLVGHNRCDLELMCKVLSRTEGPAPAVDDLVFC---PNKTG---------EADLL-GRGYERVEPMLKAVGLGKGFLFIHRKTHKTRPKKLDVAKYRLRKSGWFTSRTALLLEKYALSEEELVALHAIFSETDFKGNSTMDVYSFFSEIGEDETQYGHWLLQAV-------GAG---------------------GQQNRDITWDQYLEVVCFFSMFSRREVLRFAFGSLDPGMRGYLDESDFQRFLTAVFQHESGIPGNYNGKAKRGFSRLANSG------TQLDFPQFEKLCAQYPRLPHPIYRLQTAIHKHNLGESFWDQKREIFTNARVAVGVE 810
BLAST of mRNA_P-wetherbeei_contig1237.2.1 vs. uniprot
Match: D7G629_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G629_ECTSI) HSP 1 Score: 241 bits (616), Expect = 2.680e-63 Identity = 174/476 (36.55%), Postives = 233/476 (48.95%), Query Frame = 1
Query: 40 ARFEHNCKHREDTFLP---LTFLWHDHARMLPTSGDLDLSGWAVDATSMPDVAALVAR--------GGINSLRLDRCWRICDEDLATLTDALLT---------ALSLAGCAAVTDAAAEWLHGVAPALESVDVSGTALTDAGLQLVLGASAYLQRLAARGCSGLTDRGILAVSTAIQRHRRLNDVDLAGSRRFGDDGAMALLAASGVLTRLSLAGCVQLSELCLIGLDRPDFSSTRLRFLDLSGVPIAPHGLRWVARGCKHLLELDLSRSPLLTDRGLWYFVEAAPAPPSLRTLRLAGCIALTDGGVADFLRAAGGALRHLTLDGCTQVG--------------------------------------------DLTATAAGASSPRLRRLGLSEVTTLTDAGLAALAAGCRRLHYVDVGAHISRLETTRRCRVPRLGDGGAAALCAALAGALVFLRVDGAARVGDSTLAAAGGSC 1275
ARF HN K EDT+LP + +D A P G LDLSGW + MP +A + GG+ SL LD+CWR+ D+ + L L A S+AGC+ +TD + S+DVSGTA+TD G+QL+LGAS ++ L R GLTDRG++A+ I+R R+L +++L S RF D G +ALL+A G+L L + GC QLSELCL+GL R F+ST LR LD+ G+ IA WVA+GCK L L++SR PLLTD L Y V L +AG LTDGG++ L +G LR +TLDG T +G D T P L L + E+T L +D + I+ LET+ R RVP+LG G L L LR++GA ++ D +L A G +C
Sbjct: 7 ARFCHNRKDVEDTYLPGDDALYRLNDGA---PRDGRLDLSGWGIRDEDMPGIATVALANVDAKADTGGVTSLVLDKCWRLTDKGVEALAKPFLDQTTSPNRMEAFSVAGCSLLTDE-----------VVSLDVSGTAITDDGIQLLLGASKVVRSLGLRDLPGLTDRGLMAILQCIKRRRKLQNLELCRSLRFTDGGLLALLSAGGLLRTLDIHGCSQLSELCLMGLQRATFTSTNLRCLDVRGMAIADIAFGWVAQGCKVLENLNISRCPLLTDLALEYLV-----------LDVAGVGNLTDGGMSILLPRSGPTLRDITLDGATSLGMGKLVDRPTTSCIYYRRHSHHPFFNITHGNSTDRITTRHAPNTGDGTVRDIARHCPGLTSLSMVELTRTXXXXXXXXXXXXXLLRLLDSSSDINVLETSHRTRVPKLGGDGVRELSLGTP-CLTVLRLNGACKITDDSLLAVGSNC 456
BLAST of mRNA_P-wetherbeei_contig1237.2.1 vs. uniprot
Match: A0A7S1TZ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ14_9STRA) HSP 1 Score: 151 bits (381), Expect = 9.560e-34 Identity = 131/421 (31.12%), Postives = 200/421 (47.51%), Query Frame = 1
Query: 97 LWHDHARMLPTSGDLDLSGWAVDATSMPDVAALVARGGINSLRLDRCW----RICDEDLATLTDALLTALSLAGCAAVTDAAAEWLHGVAPALESVDVSGTALTDAGLQLVLGASAYLQRLAARGCSGLTDRGILAVSTAIQRHRRLNDVDLAGSRRFGDDGAMALLA-ASGVLTRLSLAGCVQLSELCLIGLDRPDFSSTRLRFLDLSGV-PIAPHGLRWVARGCKHLLELDLSRSPLLTDRGLWYFVEAAPAPPSLRTLRLAGCIALTDGGVADFLRAAGGALRHLTLDGCTQVGDLTATAAGASSPRLRRLGLSEVTTLTDAGLAALAAGCRRLHYVDVGAHISRLETTRRCRVPRLGDGGAAAL---CAALAGALVFLRVDGAARVGDSTLAAAGGSCLALRTLSARFCSGMTDDGV 1332
L+ D A+ P G +D S +A+ + VAA N L L R ICD A +T L L L C+ +T + L L +D+SG + D G+ ++ L+ L C+ L D I ++ I+ R L +DL+G+ +F ++ ++LLA G L L+L+ C QL++LC++GL R S L L L + + +++ GCK L ELDL L+D GL Y +LR + A C ++D G A F+ AG + + C ++GD + T G +S L L + V+ ++DAGL LA GC+ L +D A I+ L+TT + RVP L G AL C L + FL V R + L +C + L+ C +TD+G+
Sbjct: 68 LYADEAKTKPLDGAIDFSFYAMRDEDVAVVAATCVDA--NELTLQRNMYLTDAICDAITANMTR--LHTLRLPHCS-ITLNGIKSLQSYLQHLYFLDLSGNDINDDGVYILSCNCVRLETLVLSECAALRDHSIQYIAQLIKSRRALRHLDLSGNIKFSNEVCLSLLAEGGGRLESLNLSNCSQLTDLCMMGLQRGRTHSMSLVKLVLQNMHTLHDSACNFISLGCKKLEELDLRNCLHLSDAGLQYLTRIQ----TLRRVNFAECPGISDEGFASFVEQAGARFSSVDVTSCIKIGDASFTMLGETSNFLSVLKANGVSRVSDAGLMKLADGCQLLTAIDCSADINTLDTTTQSRVPSLSQRGLKALFKKCPQLT-EVNFLGVH---RFDNGILKLMAKNCAGVLRLNVHGCFTLTDEGI 475
BLAST of mRNA_P-wetherbeei_contig1237.2.1 vs. uniprot
Match: A0A329RTZ0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RTZ0_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.520e-6 Identity = 92/377 (24.40%), Postives = 155/377 (41.11%), Query Frame = 1
Query: 85 PLTFLWHDHARMLPTSGDLDLSGW-AVDATSMPDVAALVARGGINSLR--LDRCWRICDEDLATLTDA-LLTALSLAGCAAVTDAAAEWLHGVAPALESVDVSGTA-LTDAGLQLVLGASAYLQRLAARGCSGLTDRGI--LAVSTAIQRHRRLNDVDLAGSRRFGDDGAMALLAASGV----LTRLSLAGCVQLSELCLIGLDR-PDFSSTRLRFLDLSGVPIAPHGLRWVARGCKHLLE-LDLSRSPLLTDRGLWYFVEAAPAPPSLRTLRLAGCIALTDGGVADFL-------RAAGGA--------LRHLTLDGCTQVGDLTATAAGASSPRLRRLGLSEVTTLTDAGLAALAAGCRRLHYVDVGAHISRLET 1131
P T L+ R L ++DL + +V + +A+ A G + R + I D +A L LT+L ++GC A+TD + L+ + ++ + A L V L L+ RGC G+TD + LA + L +D+ + G ++ LA S V + L++ C+ + + G + P S L L LSG+ I W+ +GC L+ L+++R +L+D L +P ++ L + C +TD G+ + R A L+ L L C VGD G L +L L + ++D G+ +A GC L + + L+T
Sbjct: 55 PPTVLFCQDTRGLRIKKEVDLRNFTSVSNEWLLAIASHPAANGSGTFRTLILAGTSITDSGIAHLNKLKYLTSLDVSGCHALTDEGLNTIRRQLSLLQELHLNECHHFSSAVLSKVWKDCKRLHSLSVRGCPGVTDAFLQCLATTKRSSAASTLRSLDIRQCKNLTSSG-ISYLANSTVKDMSMYHLAVDDCLGVDNMAFFGFETSPGLRS--LTSLSLSGLGIDETATSWIVKGCGTSLQRLNVARCKVLSDFALLLMAPLISSPVFVK-LNMQECPLITDTGIKNLFSLEEEKYRDAADDDDDVPQTHLKCLNLKHCVNVGDDAMVLVGKYGGNLVKLNLKGLRKVSDRGVMEIAKGCPLLKNISLSGRNITLQT 427
BLAST of mRNA_P-wetherbeei_contig1237.2.1 vs. uniprot
Match: A0A7S0W0F7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0F7_9CRYP) HSP 1 Score: 60.8 bits (146), Expect = 9.190e-6 Identity = 67/228 (29.39%), Postives = 94/228 (41.23%), Query Frame = 1
Query: 643 LCLIGLDRPDFSSTRLRFLDLSGVP-IAPHGLRWVARGCKHLLELDLSRSPLLTDRGLWYFVEAAPAPPSLRTLRLAGCIALTDGGVADFLRAAGGALRHLTLDGCTQVGDLTATAAGASSPRLRRLGLSEVTTLTDAGLAALAAGCRRLHYVDVGAHISRLETTRRCRVPRLGDGGAAALCAALAGALVFLRVDGAARVGDSTLAAAGGSCLALRTLSARFCSGMTD 1323
L +G + P S LR SGV + P G + GC+ L LD+ ++DR L A SLRT+RL GC+ LT G +A F+R AG L L L GC + D A L L + ++ AL VG L+ R RV + D + G L L + G V D ++ C L+ LS R+C+ ++D
Sbjct: 92 LAQVGEEVPGLRSISLR--QCSGVDMLKPEGFEALCMGCRRLRCLDMVGVMTMSDRMLH---AAHKLCASLRTVRLGGCVCLTPGALAGFVRHAGHNLLELDLSGCP-IDDHVVREVAARCGSLESLSVCYCDDVSHMAWCALLRA-------RVG-----LKVLRMGRVAGVTDPLVLIIAKHQGGTLEELDIAGCGLVTDESVGYLSYRCQKLKKLSLRYCAKVSD 301
BLAST of mRNA_P-wetherbeei_contig1237.2.1 vs. uniprot
Match: A0A0P1AHX6_PLAHL (F-box protein containing LRR n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHX6_PLAHL) HSP 1 Score: 62.0 bits (149), Expect = 1.300e-5 Identity = 64/261 (24.52%), Postives = 108/261 (41.38%), Query Frame = 1
Query: 394 TDAGLQLVLGASAYLQRLAARGCSGLTDRGILAVSTAIQRHRRLNDVDLAGSRRFGDDGAMALLAASGV------------LTRLSLAGCVQLSELCLIGLDRPDFSSTRLRFLDLSGVPIAPHGLRWVARGCKHLLELDLSRSPLLTDRGLWYFVEAAPAPPSLRTLRLAGCIALTDGGVADF--LRAAGG----------ALRHLTLDGCTQVGDLTATAAGASSPRLRRLGLSEVTTLTDAGLAALAAGCRRLHYVDV 1104
+ AGL V LQ ++AR C G+TD +V T + +R + L RF D + ++G+ + L++ C+ L + + + S L+ L L G+ I + W+ +GCK L LD+ R L++D L +P L L+ C LTD G+ + L G ++ L L C +GD G L +L + + ++D G++ +A GC L + +
Sbjct: 94 SSAGLCKVWKNCKRLQTISARRCPGVTD----SVLTCLANTKRTSSYPL----RFLDIRQCKNVTSAGISHLANSVVDSIAMFHLAVDDCLGLRNMAFLEFETSS-SLCLLKSLSLKGLDIDETAINWIVKGCKSLQRLDVGRCKLISDFALTLMAPLISSP-IFAELNLSECPLLTDMGIQNLFLLEEKKGFSDDDDIPQMSIAMLNLKQCFIIGDEAMVYVGKYCGNLVKLNIKGLKKVSDRGISDIAKGCPLLRKLSM 344 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1237.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1237.2.1 >prot_P-wetherbeei_contig1237.2.1 ID=prot_P-wetherbeei_contig1237.2.1|Name=mRNA_P-wetherbeei_contig1237.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1629bp MLPTSGDLDLSGWAVDATSMPDVAALVARGGINSLRLDRCWRICDEDLATback to top mRNA from alignment at P-wetherbeei_contig1237:1140..6778+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1237.2.1 ID=mRNA_P-wetherbeei_contig1237.2.1|Name=mRNA_P-wetherbeei_contig1237.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5639bp|location=Sequence derived from alignment at P-wetherbeei_contig1237:1140..6778+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1237:1140..6778+ >mRNA_P-wetherbeei_contig1237.2.1 ID=mRNA_P-wetherbeei_contig1237.2.1|Name=mRNA_P-wetherbeei_contig1237.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=4887bp|location=Sequence derived from alignment at P-wetherbeei_contig1237:1140..6778+ (Phaeothamnion wetherbeei SAG_119_79)back to top |