mRNA_P-wetherbeei_contig1236.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1236.3.2
Unique NamemRNA_P-wetherbeei_contig1236.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: D7G7G8_ECTSI (Similar to vacuolar protein sorting 24 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G8_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.970e-41
Identity = 93/206 (45.15%), Postives = 125/206 (60.68%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATM------LLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
            W+R+I  EVRAL+                   +AK+ T       LL +    SR         K R++EG+AQ++SV MQLQ Q+ALIKV+G +KKS E+MA++G LVKIPELQ+ M  LA EMERAGLVEE+V +GL   D + +++ A  EVD+V+AE+T G+L GAVDAPT VP+           E+  +   MKARL+SL
Sbjct:   18 WRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVMSRN-------AKNRMHEGKAQLHSVQMQLQNQIALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLSLTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPAAVAAXXXXAEEEEKANAMKARLESL 216          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A8J2S9J1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J1_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.710e-37
Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
            W+R +++E RA+D                     K+     C+    +R I R  RA + R+   +AQ+NSVNMQLQ Q A+++ +GCMKKS EVM  + KLVK+PELQ+TM ++ REMER+GL+EE+V + L+ LDGD VE +  L+V++VV EL   L  G  DAP  +P+Q    Q V   E   +++ MKARLQ+L
Sbjct:   22 WRRELRKEQRAMDREISKLEQMERKSRDECRKYGKEGRQDACK--IVAREIVR-TRAARNRMLMAKAQINSVNMQLQTQAAMVRAAGCMKKSTEVMRCMNKLVKLPELQKTMMEMQREMERSGLIEEVVGDALDELDGDDVEEETELQVNKVVEELAGDLFKGQTDAPETLPEQ----QAVEPAEADDDLDTMKARLQAL 214          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A835ZDQ5_9STRA (Vacuolar protein-like protein sorting 24 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 5.070e-36
Identity = 85/183 (46.45%), Postives = 115/183 (62.84%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQV---RATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQE 540
            W RT+ RE+R ++                   LAK+ +    R     R + RQ+   R TK R+YEG+ Q++SV MQL+ QLAL+KV+GC+ KS EVM  +GKLV IPELQ TMTDLAREMERAGL EEI+ + +E   G + E +   EV++V+AE+TA  + GA +AP G PQ +V +QE
Sbjct:   12 WNRTMNREIRTIERQIKSMDNEEAKLVRDIKKLAKEGS----RNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTN-EDEVDQEVEKVLAEITATTMAGAEEAPVGEPQVQVAEQE 189          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: F0Y4L7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4L7_AURAN)

HSP 1 Score: 121 bits (304), Expect = 6.850e-31
Identity = 70/160 (43.75%), Postives = 102/160 (63.75%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGL 480
            WKR + +E R ++                   LAK   +  C+    ++ I R  RA + RL   R Q++SV+MQLQ Q A+++ +GCMKKS EVMA + +LVK+PELQ+TM ++ REMERAGLV+E++ + ++ +DGD +E D A+EVD+VVAELT  L
Sbjct:    5 WKRELAKEGRQMEREIRKMEEAENKSKAECQKLAKAGRVDACK--IIAKEIVR-TRAARERLLVARTQISSVSMQLQTQAAMVRAAGCMKKSGEVMAVMNQLVKLPELQKTMMNMQREMERAGLVDEMIQDSMDMMDGDDIEDDTAVEVDKVVAELTGDL 161          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A7S2FG68_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FG68_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.380e-27
Identity = 60/120 (50.00%), Postives = 85/120 (70.83%), Query Frame = 1
Query:  163 VRATKAR--LYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVP 516
            VRA KA+  +Y  RA MN+++ Q++ QLA+ K +GCM++SAEVM  +  L++   +   M  LAREME+AG++EEI+ EGLE +DGD +E +AA EVD+VV+ELT GL  GA   P  +P
Sbjct:   54 VRARKAKENMYNSRAMMNNMSNQMKMQLAITKTAGCMQRSAEVMGVMNNLMQTGTMTADMHSLAREMEKAGMIEEIMNEGLEQIDGDDIEDEAAQEVDKVVSELTVGLFSGAEVVPEAIP 173          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: UPI000A2A920C (charged multivesicular body protein 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A920C)

HSP 1 Score: 111 bits (277), Expect = 2.780e-26
Identity = 73/200 (36.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
            W  ++++E R LD                    AK+    +CR    ++ +    +A  +++Y  +AQ+NSV M ++ QLA I+++G M+KSAEVMA + KLVK+PE+Q TMT+L++EM +AG++EE++ +  E L+ D +E  A  EV++++ E+TAG+L  A  A T +P       E   EED   M+EM++RL++L
Sbjct:   19 WSASLRKEGRVLDRQIRAIKNEEMKVQRSIKDAAKKGDKDVCR--ILAKELINSRKAV-SKMYASKAQLNSVEMSMKTQLATIRMAGAMEKSAEVMAYMQKLVKVPEIQATMTELSKEMMKAGIIEEMLEDTFEGLEDDDLEEAADEEVEKILFEVTAGVLGNAEHATTPLPTGAEGVSEPEPEED---MDEMRSRLEAL 212          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A1Y1Z736_9FUNG (Charged multivesicular body protein 3 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z736_9FUNG)

HSP 1 Score: 110 bits (276), Expect = 3.530e-26
Identity = 75/200 (37.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
            W+++I+ + R LD                   LAK+  +  C+    ++ + R  R  K R++  +AQ+NS+ MQLQQQLA +KV+G ++KS EVM  V +LVK+PE+ QTM  +A EM +AG++EE++ + L+A + + +E +A  EV++V+ ++T GLL  A   P G P Q     E   EE+  E++EM+ARL +L
Sbjct:   19 WRQSIRAQERTLDRQIRGIESEEVKIKRSMKQLAKKKDITNCK--MLAKELVRS-RKQKDRIHTSKAQLNSILMQLQQQLATLKVAGSLQKSTEVMTLVNRLVKLPEISQTMETMAMEMTKAGIMEEMIGDTLDAFEDEDIEEEADEEVNKVLFQVTEGLLGEAT--PVGAPLQS----EAEPEEEP-ELDEMQARLSAL 208          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A2G8JCC5_STIJA (Putative charged multivesicular body protein 3 isoform X3 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JCC5_STIJA)

HSP 1 Score: 107 bits (266), Expect = 1.150e-24
Identity = 71/201 (35.32%), Postives = 116/201 (57.71%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDG-DSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
            W   + ++ R LD                    AKQ    +C  ++ ++ I R  R  K R+Y  +AQ+NSV+MQ++ Q A+++V+G ++KS +VM A+  L KIP++Q+TM +L++EM +AG++EE+V +  E+LD  D +E  A  EVD+V++ELTAG L     A T    + +    +  E D  E E+M+ RL++L
Sbjct:   15 WTTALNKQSRELDRQIRSIEREEAKVKKSLKDAAKQGHKEVC--TTLAKEIVRS-RKAKNRIYTSKAQINSVSMQMKNQQAMLRVNGAIQKSTDVMKAMQSLCKIPQIQETMRELSKEMMKAGIIEEMVEDTFESLDDQDELEDAAQEEVDKVLSELTAGALANVPSAVTDDLPEAMGATAMSDESDEEESEDMQRRLEAL 212          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: A0A433PQA2_9FUNG (Vacuolar sorting protein VPS24 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQA2_9FUNG)

HSP 1 Score: 107 bits (266), Expect = 1.330e-24
Identity = 68/202 (33.66%), Postives = 123/202 (60.89%), Query Frame = 1
Query:    1 WKRTIQREVRALDXXXXXXXXXXXXXXXXXXILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLL--VGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
            W++ I+ + RAL+                   LAK+     C   + ++ + R  R  K RLY  +AQ+NS+ MQL  QL+ +K++G ++KS+E+M  V ++V++PE+ Q M +++ EM +AG+++E++ + +E+LD + +E++A  EV++V+ ++T GLL  VG V AP  VP+    ++E    E+  E++ M+ RLQ+L
Sbjct:   24 WRQDIRAQERALERQLRGIEGEELKVKKSLKALAKRGDKKAC--MTLAKELVRSKRH-KERLYTSKAQLNSIVMQLNNQLSTLKIAGVLQKSSEIMKLVNQVVRLPEISQAMQEMSMEMMKAGIMDEMIQDTMESLDDEDLEAEADEEVNKVLFQVTDGLLGEVGQVGAPLEVPELPASEEE----EEEPELDIMQKRLQAL 218          
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Match: UPI001BB206FD (charged multivesicular body protein 3-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB206FD)

HSP 1 Score: 105 bits (263), Expect = 3.420e-24
Identity = 59/147 (40.14%), Postives = 95/147 (64.63%), Query Frame = 1
Query:  160 QVRATKARLYEGRAQMNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLAREMERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAPTGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL 600
            Q R  K R+Y  +A +NSV+MQ++ QLA +++SG M+KS EVM  +  LVK+PE+Q TM DL++EM +AG++EE++ +  E+LD D  E     E+++V+ ELT+G L  A +  T +P+      E        +++ M+ARL++L
Sbjct:   69 QSRKAKNRIYTSKAHLNSVDMQMKNQLATLRISGAMQKSTEVMKVMQSLVKVPEIQATMMDLSKEMMKAGIIEEMMEDTFESLDDDIEEEATQAEIEKVLFELTSGALSTAPEVDTKLPEGATAGPESEEXXXXXDLQAMQARLEAL 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1236.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7G8_ECTSI1.970e-4145.15Similar to vacuolar protein sorting 24 homolog n=2... [more]
A0A8J2S9J1_9STRA5.710e-3742.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZDQ5_9STRA5.070e-3646.45Vacuolar protein-like protein sorting 24 (Fragment... [more]
F0Y4L7_AURAN6.850e-3143.75Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2FG68_9STRA4.380e-2750.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI000A2A920C2.780e-2636.50charged multivesicular body protein 3 n=1 Tax=Exai... [more]
A0A1Y1Z736_9FUNG3.530e-2637.50Charged multivesicular body protein 3 n=1 Tax=Basi... [more]
A0A2G8JCC5_STIJA1.150e-2435.32Putative charged multivesicular body protein 3 iso... [more]
A0A433PQA2_9FUNG1.330e-2433.66Vacuolar sorting protein VPS24 n=1 Tax=Endogone sp... [more]
UPI001BB206FD3.420e-2440.14charged multivesicular body protein 3-like n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1236contigP-wetherbeei_contig1236:4513..6603 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7G8
Preferred nameCHMP3
PFAMsSnf7
Model size769
Max annot lvl2759|Eukaryota
KEGG koko:K12193
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0000815,GO:0000920,GO:0002020,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006996,GO:0007032,GO:0007034,GO:0007041,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008333,GO:0009056,GO:0009057,GO:0009987,GO:0010008,GO:0010256,GO:0010564,GO:0010824,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019058,GO:0019068,GO:0019538,GO:0019899,GO:0019941,GO:0022411,GO:0022607,GO:0030163,GO:0030496,GO:0031090,GO:0031210,GO:0031410,GO:0031982,GO:0032386,GO:0032465,GO:0032467,GO:0032509,GO:0032510,GO:0032511,GO:0032535,GO:0032879,GO:0032886,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0034622,GO:0035091,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040012,GO:0040013,GO:0040017,GO:0042221,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0043162,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043328,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045324,GO:0045787,GO:0046605,GO:0046618,GO:0046755,GO:0046907,GO:0046983,GO:0048284,GO:0048518,GO:0048519,GO:0048522,GO:0048524,GO:0048525,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0050997,GO:0051036,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051258,GO:0051259,GO:0051291,GO:0051301,GO:0051302,GO:0051493,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051726,GO:0051781,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0061763,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070405,GO:0070507,GO:0070676,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0090066,GO:0090068,GO:0090174,GO:0097352,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1901981,GO:1902186,GO:1902187,GO:1902188,GO:1902936,GO:1903649,GO:1903900,GO:1903901,GO:1903902,GO:1904669,GO:1990381,GO:2000641
Exons5
Evalue1.44e-43
EggNOG OGsCOG5491@1|root,KOG3229@2759|Eukaryota
Ec32 ortholog descriptionSnf7 family
Ec32 orthologEc-02_000210.1
Descriptionvacuolar transport
Cds size549
COG categoryN
BRITEko00000,ko00001,ko00002,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1236.3.2prot_P-wetherbeei_contig1236.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1236 4679..6549 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185946.7622535-UTR-P-wetherbeei_contig1236:4512..46781683185946.7622535-UTR-P-wetherbeei_contig1236:4512..4678Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1236 4513..4678 -
1683185946.8209634-UTR-P-wetherbeei_contig1236:6549..66031683185946.8209634-UTR-P-wetherbeei_contig1236:6549..6603Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1236 6550..6603 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185946.7735343-CDS-P-wetherbeei_contig1236:4678..47591683185946.7735343-CDS-P-wetherbeei_contig1236:4678..4759Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 4679..4759 -
1683185946.7842336-CDS-P-wetherbeei_contig1236:4999..51101683185946.7842336-CDS-P-wetherbeei_contig1236:4999..5110Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 5000..5110 -
1683185946.7949438-CDS-P-wetherbeei_contig1236:5458..56171683185946.7949438-CDS-P-wetherbeei_contig1236:5458..5617Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 5459..5617 -
1683185946.8030148-CDS-P-wetherbeei_contig1236:5928..60681683185946.8030148-CDS-P-wetherbeei_contig1236:5928..6068Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 5929..6068 -
1683185946.8121276-CDS-P-wetherbeei_contig1236:6491..65491683185946.8121276-CDS-P-wetherbeei_contig1236:6491..6549Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1236 6492..6549 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1236.3.2

>prot_P-wetherbeei_contig1236.3.2 ID=prot_P-wetherbeei_contig1236.3.2|Name=mRNA_P-wetherbeei_contig1236.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp
MEREEKKVEREIKILAKQATMLLCRPSSFSRRIWRQVRATKARLYEGRAQ
MNSVNMQLQQQLALIKVSGCMKKSAEVMAAVGKLVKIPELQQTMTDLARE
MERAGLVEEIVTEGLEALDGDSVESDAALEVDRVVAELTAGLLVGAVDAP
TGVPQQEVQQQEVGTEEDTGEMEEMKARLQSL*
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mRNA from alignment at P-wetherbeei_contig1236:4513..6603-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1236.3.2 ID=mRNA_P-wetherbeei_contig1236.3.2|Name=mRNA_P-wetherbeei_contig1236.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2091bp|location=Sequence derived from alignment at P-wetherbeei_contig1236:4513..6603- (Phaeothamnion wetherbeei SAG_119_79)
TGGAAGCGCACCATCCAGCGCGAGGTCCGCGCGCTGGACCGGCAGATCAC TAGCATGGAGCGTGAGGAGAAAAAGGTGGAACGAGAAATCAAGATACTTG CGAAGCAGGCAAGTTCGGGGAATATCGGTGATGGCTGTACTCGTCGTCGT TCTCCACGAAGCAGTGCTTACGTTTTCAGTCTCAGATCCATGTTTGCAGT TTTGTTTGAATTCTTCGCAAGTTTGAGAAATCACATCCGCGGACCATTTT AGATCGGCACTTTTTTCGCTCAGCAAGAGTCGTAACGTTGTAATACTGAG TAGCTTGGCACTGGCCTGACATCGGTCGTGGGCTTCCTACTATCTTTTTT GCCTCTGTCATTCCTGCCGCAGGGACCATCACGGATGAGCGCAATCAAGA TTTTAGCCAAACAGATTGTCCAGGTGATCGTAATTTCGTTTTTGCGAGGG GAAGGGCCGGGCATGCGACTTGTAGTCTTAGCTCAAGAGACGGGGGAAAT AACGGGTTAGCGCACGGGATTTGAGATGCTTCGAGCTATGCTCCTCTGCC GACCTTCCTCCTTCTCCCGGCGGATCTGGAGGCAGGTCCGGGCGACAAAA GCGCGGCTTTACGAAGGGCGAGCGCAGATGAACTCCGTCAATATGCAGCT GCAACAACAGCTCGCGCTCATCAAGGTGAACGAAGGATGCTGGCGGCGGT GCCAGCTTATGTTGGTGGACTCTTTGGCAGCCGATGTGTTGCTTCATTTG CTGACCGCAGAAGGCAAGTCTTTTGTGTCTGAGTCTTGATCCTAAGCCGC CCTTCCCTGCCGCCGCTGCTGGCTTGTTCCCGTTCGATGCATTGCGGTAT ATGATTGGCTCTTTTGCACTGACTGCTGTTTGCTGCCCTCACTGCGGCGC TTGCCGCACGTGCCGCCCTTGCTTTTGCCGTGATATTGGCCTTTGTGGCC TCATCAATTCGCTCTATGTACCACCCTCTCCCCCAGGTGTCGGGGTGCAT GAAGAAGAGTGCCGAGGTGATGGCGGCGGTGGGCAAGCTAGTCAAGATCC CCGAGCTCCAGCAGACCATGACCGACCTCGCCCGCGAGATGGAGCGCGCC GGGCTCGTCGAGGAGATTGTCACCGAGGGGCTCGAGGCGCTGGATGTGCG TCAGAACGCTTTTGGCGGTTTCGTTTTAATACCGCCCATGTGATTCGTTT CCGGGTGCAGGTTTACGATATCGGGAGATGGGAGAAACCACCTGCGGACA CGTTTGACTTTCGTCTCTCTATTTTCCTGTCCTCTCTTTGTGCTACTGTG TTGCCCTTAGTTACCATCAAGCATGATCCAGGCTGTTTGGGGCTCGGGCT AAGGGACGTTGGCAGTCGCCGGACCTTTGACACGGGCGCATCCATTCCTT CTCGTCTTTCGTACGTTCTTTGCGCCTAGGCCTGATCAACTGCCGCACTC TTTTCGTTTTTCCTTCTCCTGTGTATTGTACTGCGTCCCGCAGGGCGACT CGGTGGAGTCGGACGCGGCGCTGGAGGTGGACCGGGTCGTGGCGGAGCTG ACGGCTGGCCTACTCGTCGGTGCCGTTGACGCCCCCACCGGCGTACCACA ACAGGTCGGTCAGAAATGTATTCAAGGCGGGCGCTGATGCATTTGTTGAA CCTGCGGGGCCTACTTCGTTTGCGTAAGAGGTTGGCCGCAGCAAGCACGT TTGCTTATACTAGTGTGTCATTGTGGGCGTCTGCTTTGCTGTTCTTCGCC GTCCAAGTTTAAGCGTGTACCTGCGTTTCTGAACCCCTTCCTTTTCCATA ACATCCTTCGCTTTTCCCTTTTTACGGTGCTTTGGTCTGCGCAGGAAGTG CAGCAGCAGGAAGTCGGGACGGAGGAAGACACCGGCGAGATGGAGGAGAT GAAGGCGCGGCTGCAATCCCTCTAGTCAACCTAGGAAGCTCCCTCCCTTG CCCCTCTCCGCTGTCGCCAAAGCGGCAGAGGCCGTCCCACCTATTAGGCA CCAGACTTTCCGGGTCGGAAAAGACCGTGTTAAGAAACCTCTTTTATTCA GGTTTTAATGGACCATTCTCTAATAGAGCGCTACTCTGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1236:4513..6603-

>mRNA_P-wetherbeei_contig1236.3.2 ID=mRNA_P-wetherbeei_contig1236.3.2|Name=mRNA_P-wetherbeei_contig1236.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig1236:4513..6603- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCGTGAGGAGAAAAAGGTGGAACGAGAAATCAAGATACTTGCGAA
GCAGGCAACTATGCTCCTCTGCCGACCTTCCTCCTTCTCCCGGCGGATCT
GGAGGCAGGTCCGGGCGACAAAAGCGCGGCTTTACGAAGGGCGAGCGCAG
ATGAACTCCGTCAATATGCAGCTGCAACAACAGCTCGCGCTCATCAAGGT
GTCGGGGTGCATGAAGAAGAGTGCCGAGGTGATGGCGGCGGTGGGCAAGC
TAGTCAAGATCCCCGAGCTCCAGCAGACCATGACCGACCTCGCCCGCGAG
ATGGAGCGCGCCGGGCTCGTCGAGGAGATTGTCACCGAGGGGCTCGAGGC
GCTGGATGGCGACTCGGTGGAGTCGGACGCGGCGCTGGAGGTGGACCGGG
TCGTGGCGGAGCTGACGGCTGGCCTACTCGTCGGTGCCGTTGACGCCCCC
ACCGGCGTACCACAACAGGAAGTGCAGCAGCAGGAAGTCGGGACGGAGGA
AGACACCGGCGAGATGGAGGAGATGAAGGCGCGGCTGCAATCCCTCTAG
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