mRNA_P-wetherbeei_contig123.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig123.1.1
Unique NamemRNA_P-wetherbeei_contig123.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: A0A838FR76_9BACT (Alanine racemase n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A838FR76_9BACT)

HSP 1 Score: 262 bits (669), Expect = 5.410e-80
Identity = 175/428 (40.89%), Postives = 233/428 (54.44%), Query Frame = 1
Query:  169 VLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPALPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQLPQPRLAVGDRVRVLPSHACPVVNLSDELLVETGG 1452
            ++V   R+++NI +M   A   GV LRPH KTHK + IA+LQL  GA+G+  ++  EA+VF+    G+ S+TV YP +  R++ARL   A     +LR+VVDSAAG  ++ RG                G +++VDVGL RCG+   H  + V LA  V   PT  +F GLLSH+GHAYA + R++V A A  E      VR+ +E    + VPEVSVGSTPT L  +SY G+ E+RPGNYVFLD T VR+GLA +  VAL+VVSTVVS +D+F IIDAGSK LSSDLGAHGTA                                            +  +G+AF                               V RLSEEHG++ R        L +G R+R++P+H+CPVVNL+DEL+V + G
Sbjct:    1 MIVDRDRLQQNIAQMQSLADGRGVRLRPHIKTHKCVEIAQLQLAQGALGVTASKVEEALVFIAA--GVRSVTVAYPIVDRRKLARLLRGAQAHGTELRVVVDSAAGFEALTRGSQDAGTVV--------GAFVEVDVGLRRCGL-TEHDPQLVPLARAVHENPTT-KFMGLLSHAGHAYAASSREEVAAIAAEECQILQRVRQHLEKA-GIPVPEVSVGSTPTVLASDSYDGITEIRPGNYVFLDRTPVRLGLATMAQVALSVVSTVVSRNDDFLIIDAGSKVLSSDLGAHGTA-------------------------------------------GVDGYGLAFT-----------------------ESGEQLQVVRLSEEHGFVARGGA----DLPIGTRLRIVPNHSCPVVNLADELVVVSDG 345          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: A0A838N231_9BACT (Alanine racemase n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A838N231_9BACT)

HSP 1 Score: 240 bits (613), Expect = 2.050e-71
Identity = 162/433 (37.41%), Postives = 232/433 (53.58%), Query Frame = 1
Query:  145 IEEIPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPALPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGS-FSVARLSEEHGWLRRDPQLPQPRLAVGDRVRVLPSHACPVVNLSDELLV 1440
            ++E+PTP V+V    +  N+R     A + G++LRPH KTHKS  IA++Q+D GAVG+  ++  E + F+    G  SIT+ YP +S  ++  L  AA     +LRL+ DS  G+ +I       A S        PGV+LK+DVGL R GV  ++ +  ++ A  + +E T + F GLLSH+GHAY  +   +V   A  EA      R  ++    + V E+SVGSTPT L  + Y G+ E+RPGNYVF+D T +R+GL  +D +AL+VV+TVVSA+D++ I+DAGSK LSSD GAHGT                                             L   G+AF                    + D+P  G    V +LSEEHG++RRD +     LA+G +VR++P+H+C VVNL+DEL V
Sbjct:    6 VDELPTPSVVVDYEALLANVRWAQNVAEQHGLALRPHIKTHKSSRIAQMQIDAGAVGITTSKPAETLRFVNA--GFKSITLAYPLVSQEKLLPLFAAARDRGVELRLIADSPIGIEAIISAATQTAYS--------PGVFLKIDVGLHRVGVS-AYSDHLLQFARKITAE-TSVCFSGLLSHAGHAYGASSAGEVRVIAGQEAQLLRHARERLQSD-GIEVRELSVGSTPTVLASDDYDGITEIRPGNYVFMDRTPLRLGLVSIDRIALSVVATVVSANDKYLIVDAGSKVLSSDAGAHGTGQ-------------------------------------------LDGFGLAFP-------------------KNDYPTGGEPLIVEKLSEEHGFVRRDAR----DLAIGSKVRIIPNHSCAVVNLADELTV 359          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: A0A8K1CPM8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPM8_PYTOL)

HSP 1 Score: 240 bits (613), Expect = 3.420e-71
Identity = 165/429 (38.46%), Postives = 231/429 (53.85%), Query Frame = 1
Query:  160 TPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLE-GLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPALPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQLPQPRLAVGDRVRVLPSHACPVVNLSDELLVE 1443
            TP V+V   RV+RN+  M   A   GV+LRPH KTHK+L IA +QL+ GA GL V++  EA+ F + GL  L SI + YP +   ++A+L EAA     + R+ +DS  G+ ++ R  A   ASG  PL     V + +DVG  R G+     +  +   A  L E   ++F G+LSH+GHAY C+  D+  A A  E      ++  IE +L V VP VSVGST TEL R+++ G+ E+RPGNYVFLD T VRMGLA + DV+L+++ TVVS +  ++I+D+GSK LSSD      AP A                                            +G+AF     D AL      A     LD      + V +LSEEHGWL++   +P P  A+G+R+ +LP+H+C V NL+D L V+
Sbjct:    7 TPSVVVDAQRVRRNVDNMQSIAQTHGVNLRPHVKTHKTLEIASMQLEAGACGLTVSKPSEALKFFQSGLSQLTSILLAYPVVQTDKIAKLLEAATQTGIEFRITIDSVEGINAVERAAA---ASGYSPL-----VLIHIDVGYHRVGL--EEDDSRILEFAQRLHESKSVQFAGILSHAGHAYGCSSVDECAAVAETERSIMVRIKSAIE-SLGVPVPTVSVGSTLTELARKNFEGVTEIRPGNYVFLDRTPVRMGLASVMDVSLSILVTVVSTNHRYFIVDSGSKVLSSD------APRATQKNTFGTSC----------------------------------YGLAFL--EKDFALLNEEPSAHESVTLDGHQIHCWEVKKLSEEHGWLQQVEGMPAP--AIGERMVILPNHSCVVANLTDNLFVQ 380          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: A0A2E6QFD5_9PROT (Alanine racemase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QFD5_9PROT)

HSP 1 Score: 233 bits (595), Expect = 8.290e-69
Identity = 142/302 (47.02%), Postives = 192/302 (63.58%), Query Frame = 1
Query:  145 IEEIPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTR-LRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGT 1047
            I ++ +P +L+   R++ NI +M ++A    V+LRPHAKTHK   IA LQL  GAVGL  +++ EA+ F+E   G+PS+TV YP   PR+V R+  AA     D R +VDS AGL  +    A  +  G P       V +K+DVGLGRCG+  + P R + LA    ++ TR L F GLLSH+GHAYA    D V A A  EA   + +R  ++    +  P +SVGSTPT L  E + G+DE+RPGNYVF+D T +R+G+A LD+VALTV++TVVS+ +   IIDAGSK LS+DLG HGT
Sbjct:    2 IPDVESPCILIDTGRLEANIARMQRKALARKVALRPHAKTHKVTEIAGLQLAAGAVGLTTSKSEEAVTFIEA--GVPSVTVAYPLADPRKVDRVLGAARHHGTDTRFIVDSEAGLDLLAACAADRSTDGIP-------VLIKIDVGLGRCGLKEADP-RIIDLARR--ADATRGLTFAGLLSHAGHAYAAGNADAVRAIATEEAAILNRLRSCLDDA-GIATPCLSVGSTPTVLAAEDFGGVDEIRPGNYVFMDLTQLRLGVASLDEVALTVLTTVVSSHEGQAIIDAGSKVLSTDLGPHGT 290          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: UPI001D0A4F2B (alanine racemase n=1 Tax=Microvirga rosea TaxID=2715425 RepID=UPI001D0A4F2B)

HSP 1 Score: 232 bits (591), Expect = 3.850e-68
Identity = 169/441 (38.32%), Postives = 227/441 (51.47%), Query Frame = 1
Query:  145 IEEIPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAW----ATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPALPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQLPQPRLAVGDRVRVLPSHACPVVNLSDEL-LVETGG 1452
            + ++ TPF+LV   R+ RNIR+++  A+E GV LRPH KTHKS+ +A LQ + GA GL  ++  EA VF+    G   I V YP + P  +  L +AA      +  + DS  GL ++ +  A +A    P       V +K+DVGL RCGV      +A+   A  L   + L F GL+SH+GHAYACA RD V   A  E        + +RR+  G  D     +SVGSTPT L    + G+ E+RPGNYVFLD TAVR+GLA  +D++L VV+T++SA+ + YIIDAGSKAL+SDLGAH +  +                                              G   A P   +            G+ DW P     V RLSEEHG++RR        L VG R+ VLP+HACPVVNL + + L   GG
Sbjct:    9 LPDLRTPFILVQRERLLRNIRRVASIASEAGVRLRPHVKTHKSVELAMLQREHGADGLTASKPSEAEVFVHA--GFKDILVAYPVIDPERILPLLQAAQRTRACVTFIADSPQGLHALNKA-AQMAGHSIP-------VRIKIDVGLHRCGV--EPDSQALEDLARCLPACSELVFDGLVSHAGHAYACADRDGVAQVARAEQQLMHSTKERMRRY--GFSDF---SISVGSTPTVLASPGFEGIHEIRPGNYVFLDLTAVRLGLASHEDISLGVVTTIISANADHYIIDAGSKALTSDLGAHSSGGS----------------------------------------------GFGLAMPFSSQ------------GKADWLP-----VVRLSEEHGFIRRQGG----DLPVGTRLLVLPNHACPVVNLFNRMALCHPGG 365          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: T2G826_MEGG1 (D-ser_dehydrat domain-containing protein n=1 Tax=Megalodesulfovibrio gigas (strain ATCC 19364 / DSM 1382 / NCIMB 9332 / VKM B-1759) TaxID=1121448 RepID=T2G826_MEGG1)

HSP 1 Score: 232 bits (591), Expect = 7.720e-68
Identity = 180/438 (41.10%), Postives = 226/438 (51.60%), Query Frame = 1
Query:  154 IPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPP----GVYLKVDVGLGRCGVPVSHPERAVRLA-ADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPA----LPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQLPQPRLAVGDRVRVLPSHACPVVNLSDELLV 1440
            + TP VLV   R+  N+R M  +A   GV+LRPHAK+HKS  IARLQL  GAVGL VA   EA  FL    G+PS+T+ YP      + R    AA    +L  VVD    LT+    LA  AA    P L       GV+LKVDVGLGRCGV    PE  V +  A  +S    LRF G+LSH+GHAYA AG  Q V A  G+     A+ R          P VSVG+TPT L  ES+ G+ E+RPGNY+FLD  AVR+GLA LDD AL VV+TVVS + ++ I+DAGSK LSSD G HG A                                         AP+     P HG+AF  P + E+                  A  + + +LSEEH ++      P+    VG++VR+LP+HAC V NL++ L V
Sbjct:   12 LETPAVLVDQTRLDANLRHMQGKAQTQGVALRPHAKSHKSGQIARLQLAAGAVGLTVATVEEACAFLAA--GVPSVTMAYPQPQVARLERCMALAAAKAAELLFVVDGLLVLTA----LAEAAAKHPCPALTDGDSRWGVFLKVDVGLGRCGVA---PESGVLVELARAVSRCAGLRFAGILSHAGHAYA-AGDAQGVRAIAGDEILKMALARMRLQDAGFHPPVVSVGATPTALAAESFAGVQEIRPGNYIFLDLQAVRLGLATLDDPALWVVATVVSRNWKYCILDAGSKTLSSDAGPHGLA----------------------------------------LAPSPDEDAPRHGLAF--PLHPESPG---------------DAEGYPIVKLSEEHAFMVHHGIGPR----VGEKVRILPAHACSVTNLTEHLTV 378          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: A0A3M1R8J7_9BACT (Alanine racemase n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A3M1R8J7_9BACT)

HSP 1 Score: 229 bits (583), Expect = 6.040e-67
Identity = 162/432 (37.50%), Postives = 223/432 (51.62%), Query Frame = 1
Query:  145 IEEIPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPALPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQLPQPRLAVGDRVRVLPSHACPVVNLSDELLV 1440
            +  + TP VL+   R+  NIR M + A   GV+LRPH KTHK L IARLQ++ GAVG+  A+  EA+ F+    G+ S+T+ +P +S  ++ RL  AA     +LR +VDS  G+ ++         +          ++LK+DVGL RCGV    P R + L   +  +P+ LRF GLLSH+GHAY    R+ V A A  E    + VR+ +E    + V EVSVGSTPT +  ++Y G+ E+RPGNYVFLD   + +GL     +AL+V++ VVSA+DE+ IIDAGSK LSSDLG HG                                              +  +GVA+    +D                        +V RLSEEHG+LRR+       L VG  VR+LP+HAC V NL+D  LV
Sbjct:    8 LSTVETPRVLLDYDRLVANIRWMQQIADTHGVALRPHIKTHKCLEIARLQMEAGAVGITAAKTEEALKFMAD--GIRSVTLAHPLVSAVKIDRLLTAARTHGTELRFIVDSMTGIQAMAXXXXXXXXTLH--------LFLKIDVGLHRCGVREEDP-RLLPLVRRIEEDPS-LRFVGLLSHAGHAYGAKDREGVRAVAREECAILNRVRQRLEEA-GIRVAEVSVGSTPTAIASDAYEGITEMRPGNYVFLDRMPLGLGLIDRSQIALSVLAMVVSANDEYLIIDAGSKVLSSDLGPHGMQ-------------------------------------------GIEGYGVAYPVADFDSGK------------------NGLTVVRLSEEHGFLRRNGF----DLPVGSLVRILPNHACVVANLADHYLV 361          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: A0A2Z3ICE3_9HYPH (Alanine racemase n=2 Tax=Microvirga sp. 17 mud 1-3 TaxID=2082949 RepID=A0A2Z3ICE3_9HYPH)

HSP 1 Score: 228 bits (582), Expect = 7.810e-67
Identity = 134/307 (43.65%), Postives = 187/307 (60.91%), Query Frame = 1
Query:  145 IEEIPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVG 1065
            + ++ TP+VLV   R+ RNIR+ +  A E G+ LRPH KTHKS+ +A LQ + GA GL  ++  EA +F+    G   + V YP + P  +  L  AA      +  + DS  GLT++ +  A  AA    P      V +K+DVGL RCG+    P  A+   A++L   + L F GL+SH+GHAY   GRDQ+   A  E       R  + G L +   ++SVGSTPT    E++ G+DE+RPGNYVFLD TAVR+G+A  DD+AL VV+T+VSA++++YI+DAGSKAL+SDLGAH +  A  G
Sbjct:    9 LPDLKTPYVLVQKERLLRNIRRGAAIATEAGIRLRPHVKTHKSIELAALQHEHGAEGLTASKPSEAEIFVRA--GFKDVLVAYPVIDPERIIPLLRAADCNRASVTFIADSREGLTAVEK--AAQAAGRSVP------VRIKIDVGLHRCGIAAESP--ALEGLAEILKRSSALIFDGLVSHAGHAYGRTGRDQIGEVAAEERRLMLLARERLTG-LGLPDAKISVGSTPTVFSSETFAGIDEIRPGNYVFLDLTAVRLGIATHDDIALAVVATIVSANEDYYIVDAGSKALTSDLGAHSSGGAGFG 302          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: UPI000FDBCD81 (alanine racemase n=1 Tax=Solirhodobacter olei TaxID=2493082 RepID=UPI000FDBCD81)

HSP 1 Score: 228 bits (580), Expect = 2.100e-66
Identity = 163/438 (37.21%), Postives = 229/438 (52.28%), Query Frame = 1
Query:  142 SIEEIPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPALPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQLPQPRLAVGDRVRVLPSHACPVVNLSDE-LLVETGG 1452
            S+ ++ TP V V   R+  NI +M+  A   GV+LRPH KTHKS+ +AR Q+ +GA G+  ++  EA+VF+E   G  +IT+ YP   P+ V  +  AAA     LRL+ DS   +         +AA     L Q   V LK+DVGL RCGV   +   AV LA  +   P  L F G+LSH+GHAYA    D V   A  E      +R  +E    + VPEVSVGSTPT L+ +   G+ E+RPGNYVFLD   + +G A  +DVALTV+++VVS++ ++ IIDAGSK LSSD G HG+                                             +P  G+A                     RL+ P    F +++LSEEHG++ R+ +     LAVG+++R++P+HACPV+NL+D  ++V T G
Sbjct:    7 SLNDLLTPCVCVDEDRMLANIDRMADLARSSGVALRPHIKTHKSIRLARAQIALGASGITASKPAEAMVFIEA--GFTAITLAYPLFHPQVVREVLAAAARHGTALRLIADSPETVA--------VAADASHALGQHTEVQLKIDVGLHRCGVD-PYSRDAVSLALAIARAPY-LAFAGILSHAGHAYASGSADAVRRIAREECATMADMRARLEAA-KLEVPEVSVGSTPTVLLNDGLDGITEIRPGNYVFLDRMQISLGAARPEDVALTVLASVVSSNQQYAIIDAGSKVLSSDRGPHGSDN-------------------------------------------IPGFGIAV--------------------RLNNPSDQPFVISQLSEEHGFIAREGR----PLAVGEKLRIIPNHACPVMNLTDRFVMVRTSG 364          
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Match: A0A525C8V9_9DELT (Alanine racemase n=1 Tax=Desulfovibrio sp. TaxID=885 RepID=A0A525C8V9_9DELT)

HSP 1 Score: 226 bits (577), Expect = 1.420e-65
Identity = 166/428 (38.79%), Postives = 224/428 (52.34%), Query Frame = 1
Query:  160 TPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLDMGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVANCDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGVPVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGEAWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFLDCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTAPAAVGAXXXXXXXXXXVAAAIGFXXXXXXXXXXXXXXAGRAAPALPDHGVAFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQLP-QPRLAVGDRVRVLPSHACPVVNLSDELLV 1440
            TP +++   R+  NIR M  RA   GV+LRPH KTHK + IA +QL+ GA G+  A+  EA+VF++   G+PS+T+ YP L  +++ RL +AA   +  +R V DS AG+ ++       AA  R   L+   V LK+DVGL RCGV     + AV LA  + S P  LRF G+LSH+G  Y+     +  A A  EA      +  IE T  + V EVSVG+TPT L  + +    E+RPGNYVFLD T VR+GLA   DVALTV+++VVS +D + I+D GSK LSSD+GAHG +                                               HG   A    D  +A                     V +LSEEHG+LRRDP     P L  G+RVR++P+H+CPV NL+ + LV
Sbjct:   51 TPRLVLDRSRLAANIRNMQARAEAAGVALRPHIKTHKCVEIAIMQLEAGAAGVTTAKVDEALVFIKA--GIPSLTLAYPLLRAKKLDRLLKAAKKRSTGMRFVADSEAGVKALSA-----AAKRRTMELR---VLLKIDVGLHRCGVAPDSAD-AVELAKLIASTPG-LRFTGILSHAGQVYSATNAAEAEAVAQEEAHCMALAKERIEAT-GLPVREVSVGATPTVLATKDFGPATEIRPGNYVFLDSTCVRLGLAQYRDVALTVLASVVSKNDTYCILDCGSKTLSSDMGAHGGSNG---------------------------------------------HGFGQAWSLDDRDMA----------------GQPLVVEKLSEEHGFLRRDPDSGWDPDL--GERVRIVPNHSCPVANLAVKYLV 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig123.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A838FR76_9BACT5.410e-8040.89Alanine racemase n=1 Tax=Chthoniobacterales bacter... [more]
A0A838N231_9BACT2.050e-7137.41Alanine racemase n=1 Tax=Chthoniobacterales bacter... [more]
A0A8K1CPM8_PYTOL3.420e-7138.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2E6QFD5_9PROT8.290e-6947.02Alanine racemase n=1 Tax=Rhodospirillaceae bacteri... [more]
UPI001D0A4F2B3.850e-6838.32alanine racemase n=1 Tax=Microvirga rosea TaxID=27... [more]
T2G826_MEGG17.720e-6841.10D-ser_dehydrat domain-containing protein n=1 Tax=M... [more]
A0A3M1R8J7_9BACT6.040e-6737.50Alanine racemase n=1 Tax=Nitrospinae bacterium Tax... [more]
A0A2Z3ICE3_9HYPH7.810e-6743.65Alanine racemase n=2 Tax=Microvirga sp. 17 mud 1-3... [more]
UPI000FDBCD812.100e-6637.21alanine racemase n=1 Tax=Solirhodobacter olei TaxI... [more]
A0A525C8V9_9DELT1.420e-6538.79Alanine racemase n=1 Tax=Desulfovibrio sp. TaxID=8... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig123contigP-wetherbeei_contig123:789..3476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1121448.DGI_0417
PFAMsAla_racemase_N,D-ser_dehydrat
Model size1457
Max annot lvl28221|Deltaproteobacteria
KEGG koko:K20757
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.27e-68
EggNOG OGsCOG3616@1|root,COG3616@2|Bacteria,1N2SF@1224|Proteobacteria,43DN3@68525|delta/epsilon subdivisions,2X6EU@28221|Deltaproteobacteria,2MAKE@213115|Desulfovibrionales
EC4.3.1.27
Descriptionalanine racemase domain protein
Cds size1455
COG categoryE
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185944.5801215-CDS-P-wetherbeei_contig123:788..11981683185944.5801215-CDS-P-wetherbeei_contig123:788..1198Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig123 789..1198 +
1683185944.5903733-CDS-P-wetherbeei_contig123:1464..17801683185944.5903733-CDS-P-wetherbeei_contig123:1464..1780Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig123 1465..1780 +
1683185944.6007686-CDS-P-wetherbeei_contig123:2136..22141683185944.6007686-CDS-P-wetherbeei_contig123:2136..2214Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig123 2137..2214 +
1683185944.6078293-CDS-P-wetherbeei_contig123:2518..25871683185944.6078293-CDS-P-wetherbeei_contig123:2518..2587Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig123 2519..2587 +
1683185944.614985-CDS-P-wetherbeei_contig123:2892..34741683185944.614985-CDS-P-wetherbeei_contig123:2892..3474Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig123 2893..3474 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig123.1.1prot_P-wetherbeei_contig123.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig123 789..3474 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig123.1.1

>prot_P-wetherbeei_contig123.1.1 ID=prot_P-wetherbeei_contig123.1.1|Name=mRNA_P-wetherbeei_contig123.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=485bp
SYLRQEGCPSGCSMQSAVAKGCKRALRRRNPFSARFLLSTVTGATSFSIE
EIPTPFVLVSIHRVKRNIRKMSKRAAEGGVSLRPHAKTHKSLNIARLQLD
MGAVGLCVARAHEAIVFLEGLPGLPSITVTYPFLSPREVARLCEAAAVAN
CDLRLVVDSAAGLTSIRRGLAVLAASGRPPLLQPPGVYLKVDVGLGRCGV
PVSHPERAVRLAADVLSEPTRLRFCGLLSHSGHAYACAGRDQVVAAAVGE
AWATDAVRRFIEGTLDVVVPEVSVGSTPTELVRESYYGLDEVRPGNYVFL
DCTAVRMGLAVLDDVALTVVSTVVSASDEFYIIDAGSKALSSDLGAHGTA
PAAVGAGAGGDGSGGGVAAAIGFGGGGAVALGGFGGGAGRAAPALPDHGV
AFAAPRYDEALAAASYRAQRRGRLDWPPAGSFSVARLSEEHGWLRRDPQL
PQPRLAVGDRVRVLPSHACPVVNLSDELLVETGGT
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mRNA from alignment at P-wetherbeei_contig123:789..3476+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig123.1.1 ID=mRNA_P-wetherbeei_contig123.1.1|Name=mRNA_P-wetherbeei_contig123.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2688bp|location=Sequence derived from alignment at P-wetherbeei_contig123:789..3476+ (Phaeothamnion wetherbeei SAG_119_79)
TCCTATTTGCGACAAGAAGGGTGCCCCAGCGGATGCAGCATGCAGAGTGC TGTTGCGAAAGGTTGCAAAAGGGCGCTGCGGCGGCGCAACCCTTTTTCAG CTCGATTTCTGCTCAGCACTGTAACAGGAGCTACCAGTTTCAGTATAGAG GAGATTCCGACGCCGTTCGTTCTCGTCAGCATACACCGAGTCAAGCGTAA CATTCGCAAGATGTCGAAGCGAGCGGCAGAGGGCGGTGTTTCGTTGAGAC CACACGCCAAGACGCATAAGAGCTTGAACATCGCAAGGCTACAGCTCGAC ATGGGAGCTGTGGGGCTGTGCGTTGCGAGAGCGCATGAAGCGATCGTCTT TCTGGAGGGGCTGCCGGGCTTGCCTAGCATCACCGTTACCTATCCCTTCC TTTCTCCCAGGTGAGGCTGTTCAGGCAAGCCAATAGGAACGCCTTCTGTA TTGAGAGCCGATTTGTGTGCCACAAGCCGTCTCCGTTTCGCGTTGCGTTT ATCTTTTAGCCGGCCTCATACCCTATGACAAGCCTCGGCAATTCCATGTT CTTCCTCGCTTCTAATGCCTCGATTGTCGTCCTCTGCTCCCTTGCCTCTA CATTTTCCCCTTCTCCTTTCCCTGCTGAAACCGTAACCCCGCACTCGAAA CACACCAAAAACACGAAACAATGAAGGGAAGTGGCGCGGCTGTGCGAAGC TGCCGCCGTGGCAAACTGCGACCTCCGGCTGGTCGTCGACTCCGCCGCTG GCCTGACCTCCATCCGGCGCGGCCTGGCCGTACTGGCGGCGTCCGGCCGC CCGCCGCTGCTGCAGCCGCCGGGCGTATACCTGAAGGTCGACGTCGGCCT CGGGCGCTGCGGCGTGCCCGTGTCGCACCCAGAGCGGGCGGTACGGCTGG CTGCGGACGTTCTTTCGGAGCCGACGCGACTCCGCTTCTGCGGTCTGCTG AGCCACTCGGGACACGCCTATGCCTGCGCGGGCCGCGACCAGGTGGGCGG AATGGTCGGACGGAGATTAGATTGCGGGCTGTTTGCGTTTGCCGGGTTGG ACTGCTGGACAGGAGGGTGATGAAGGGGGCGGGATCAGGTAGGTTGCGGG GCAGATGGAGTTACACTGCCAGGCGTTTGCATATGAAGGTATAATTGGAG ATCACTGAACAGTACGAGCGTTGAAACTTTGCGTACCACCTGCCTCTTTG GGCCTTGCTCAAAGTATCTCGTGTTTACGTGTGACAGCCGCTTCTTCGTC GTTTGTGCTCTGTGACGCTATCGTTCTCTTTCATCGTGCCTCGTCGTGAC TCGGAGGGCTGTGTCCTCCTTCGCTCTTCCCATTCGCAACCATCTCAGGT GGTGGCGGCCGCCGTAGGGGAGGCGTGGGCGACCGACGCCGTGCGTCGCT TCATCGAGGGGACGCTCGACGTCGTAGTGAGTCTTGCGGCTGCGGCTGCG GCAGCTGCGGCGTGACGGCAGAGGAGGTGGCTTCGGTGGCGGCTACTGCA GCGCTCCGCGATTGTCTGCTGCGATATTTGGCTCGGCGCCGGCTGCAGCT TGTCGGCTGAGCTATTGTGCTTCCGGCGTGGCGAATTCTTTCACTGGCGG ACTTTGTGTTTCGCGTGCCTGAATGTGAAAACAACTTGCTCGTCGAGGAT TCCCTTCTCAAGCCTCGTTCCATTTTCGCTTTTTTCTGCGGCGGCTGCAT GGTTTCGCCGTTTTTCGGTTACGTCGGCAGGTCCCGGAGGTCAGCGTCGG CAGCACGCCGACGGAGCTCGTCCGCGAGTCGTATTACGGACTTGACGAGG TCAGCTAGCGTCGTGTTTGCCTTTTTGCAGCTTTTGCGCGCTTTTGCCGC ATTCGTTTGGGGAACCCTCTCCTCCAGCTCTTGCCATTCGAAAGTTTCAG CTATCTGCTCCCTAGAGCTTTTGGGGGAGGTGTCTCTTCTCTTTGTCCAG TAGTTGTAAGCGTCTCTATTGCATCCCCTTTCTCCCTCCCTTTCTTGAGA GGAGAGGAACAATCTCGTCGCGTAAACGCAGTCATCCGTCAAGAAGAAAT TCCTTCCTATTGGGGGCTCGCTGTGGCCTGTGCCTCCTTTTTTCGCTCTT TCAGGTGCGGCCGGGCAACTACGTCTTCCTCGACTGCACGGCCGTGCGGA TGGGGCTCGCGGTGCTCGACGACGTCGCTTTAACCGTCGTCTCCACCGTC GTCTCCGCCAGCGACGAGTTCTACATCATTGACGCCGGCTCCAAGGCCCT CTCTTCAGACCTCGGCGCCCATGGCACAGCCCCTGCCGCCGTTGGGGCCG GTGCCGGCGGCGACGGCAGCGGCGGCGGCGTGGCGGCGGCGATTGGGTTC GGCGGCGGCGGGGCGGTGGCGTTAGGAGGGTTCGGGGGAGGAGCGGGGCG CGCCGCGCCGGCGCTGCCGGACCACGGCGTGGCGTTCGCGGCGCCCCGCT ATGACGAGGCGCTGGCGGCGGCGTCCTATCGCGCCCAGCGGCGCGGCCGA CTGGACTGGCCGCCCGCAGGCAGCTTCTCGGTGGCGCGGCTCTCGGAGGA GCACGGCTGGCTGCGGCGCGACCCGCAGCTGCCACAGCCGCGGCTGGCTG TCGGGGACCGCGTGCGCGTGCTGCCGAGCCACGCCTGCCCCGTGGTAAAC CTCAGCGACGAGCTGCTTGTTGAAACGGGCGGAACCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig123:789..3476+

>mRNA_P-wetherbeei_contig123.1.1 ID=mRNA_P-wetherbeei_contig123.1.1|Name=mRNA_P-wetherbeei_contig123.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1455bp|location=Sequence derived from alignment at P-wetherbeei_contig123:789..3476+ (Phaeothamnion wetherbeei SAG_119_79)
TCCTATTTGCGACAAGAAGGGTGCCCCAGCGGATGCAGCATGCAGAGTGC
TGTTGCGAAAGGTTGCAAAAGGGCGCTGCGGCGGCGCAACCCTTTTTCAG
CTCGATTTCTGCTCAGCACTGTAACAGGAGCTACCAGTTTCAGTATAGAG
GAGATTCCGACGCCGTTCGTTCTCGTCAGCATACACCGAGTCAAGCGTAA
CATTCGCAAGATGTCGAAGCGAGCGGCAGAGGGCGGTGTTTCGTTGAGAC
CACACGCCAAGACGCATAAGAGCTTGAACATCGCAAGGCTACAGCTCGAC
ATGGGAGCTGTGGGGCTGTGCGTTGCGAGAGCGCATGAAGCGATCGTCTT
TCTGGAGGGGCTGCCGGGCTTGCCTAGCATCACCGTTACCTATCCCTTCC
TTTCTCCCAGGGAAGTGGCGCGGCTGTGCGAAGCTGCCGCCGTGGCAAAC
TGCGACCTCCGGCTGGTCGTCGACTCCGCCGCTGGCCTGACCTCCATCCG
GCGCGGCCTGGCCGTACTGGCGGCGTCCGGCCGCCCGCCGCTGCTGCAGC
CGCCGGGCGTATACCTGAAGGTCGACGTCGGCCTCGGGCGCTGCGGCGTG
CCCGTGTCGCACCCAGAGCGGGCGGTACGGCTGGCTGCGGACGTTCTTTC
GGAGCCGACGCGACTCCGCTTCTGCGGTCTGCTGAGCCACTCGGGACACG
CCTATGCCTGCGCGGGCCGCGACCAGGTGGTGGCGGCCGCCGTAGGGGAG
GCGTGGGCGACCGACGCCGTGCGTCGCTTCATCGAGGGGACGCTCGACGT
CGTAGTCCCGGAGGTCAGCGTCGGCAGCACGCCGACGGAGCTCGTCCGCG
AGTCGTATTACGGACTTGACGAGGTGCGGCCGGGCAACTACGTCTTCCTC
GACTGCACGGCCGTGCGGATGGGGCTCGCGGTGCTCGACGACGTCGCTTT
AACCGTCGTCTCCACCGTCGTCTCCGCCAGCGACGAGTTCTACATCATTG
ACGCCGGCTCCAAGGCCCTCTCTTCAGACCTCGGCGCCCATGGCACAGCC
CCTGCCGCCGTTGGGGCCGGTGCCGGCGGCGACGGCAGCGGCGGCGGCGT
GGCGGCGGCGATTGGGTTCGGCGGCGGCGGGGCGGTGGCGTTAGGAGGGT
TCGGGGGAGGAGCGGGGCGCGCCGCGCCGGCGCTGCCGGACCACGGCGTG
GCGTTCGCGGCGCCCCGCTATGACGAGGCGCTGGCGGCGGCGTCCTATCG
CGCCCAGCGGCGCGGCCGACTGGACTGGCCGCCCGCAGGCAGCTTCTCGG
TGGCGCGGCTCTCGGAGGAGCACGGCTGGCTGCGGCGCGACCCGCAGCTG
CCACAGCCGCGGCTGGCTGTCGGGGACCGCGTGCGCGTGCTGCCGAGCCA
CGCCTGCCCCGTGGTAAACCTCAGCGACGAGCTGCTTGTTGAAACGGGCG
GAACC
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