mRNA_P-wetherbeei_contig12189.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.370e-28 Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 7 TIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAM-----EAGGTAAAE--LASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHR 417 T+FV F L+T Q EQI +EHV ++TPA +S I+ HAT TSL AL +RL VL +L AVR G P DH+LLRQI+ + +L AM GG AA LA + DALAVT LAA+QKGAA + KF + H+D+ R Sbjct: 174 TVFVQGSFQLQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVPADHKLLRQITAVTSELRAMGNASGSGGGDAALSEALARDRCDALAVTALAALQKGAAAMDAAAHKFNLAHSDKPR 317
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI) HSP 1 Score: 106 bits (264), Expect = 6.400e-25 Identity = 67/138 (48.55%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 13 FVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRRAI 426 FV + F LET Q EQISVEHV KATP S IDLHA A TSLR L AR+ +L FL + G D+ LLRQIS + QLP M+ G + E E D+L+V YLA++QK A + D+ +KF HRR I Sbjct: 184 FVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTMD-GAQFSEEFMREFNDSLSVAYLASVQKSAGSMNDLADKFMTAFG--HRRPI 318
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA) HSP 1 Score: 100 bits (250), Expect = 6.210e-23 Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFG-VTHADRHR 417 PT +FV F L+T Q E+I++E + KATP + +DLH + G SLR L R L AFL A ++G P D+RLLRQ+S + QLPA++ + +E+ D L V YLA++ K +A LGD+++K V RHR Sbjct: 171 PTIVFVTSEFQLQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVPTDYRLLRQVSSICNQLPAVDTAELKG-DFITEYNDMLMVNYLASVTKSSASLGDLIDKHSAVVSHHRHR 309
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: K3WB84_GLOUD (COP9 signalosome complex subunit 6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB84_GLOUD) HSP 1 Score: 87.4 bits (215), Expect = 9.240e-18 Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRRA 423 PT +FV F +ET++ E ISV+H+ K P +S+ LH +++ L ++ V+ FL A+++G AP DH LLR IS + QLPAM + AA L E+ DAL V+YLA + KGA +V++F VT DRH R+ Sbjct: 188 PTMLFVKTPFKVETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAIKMLDRQVDVMVRFLQAMKNGEAPMDHNLLRHISSICNQLPAMTSQSFDAAFL-QEYNDALLVSYLATLTKGATNANTIVDRFTVTQ-DRHSRS 328
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: M4B700_HYAAE (COP9 signalosome complex subunit 6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B700_HYAAE) HSP 1 Score: 85.1 bits (209), Expect = 5.130e-17 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 420 P IFV F +ET++ E I+++H+ K TP AS+ LH +++ L ++ VL FL A++SG AP DH LLR IS + QLPAM++ AA E DAL V+YLA + KG + VV++F T H + Sbjct: 163 PKMIFVKAPFKIETSETEGIAIDHISKITPIGDASKSSLHPYLGNVRDAVKMLDRQIDVLLCFLQAIKSGEAPMDHNLLRHISSICNQLPAMQSEHFDAA-FTLEFNDALLVSYLATLTKGTTNVNTVVDRFAATQERHHHQ 303
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A0P1AXN1_PLAHL (COP9 signalosome complex subunit 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXN1_PLAHL) HSP 1 Score: 84.0 bits (206), Expect = 1.610e-16 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 420 P IFV F +ET++ E I+++H+ K P S+ LH +++ L ++ L FL A+++G AP DH LLR IS + QLPAM++ AA A E+ DAL V+YLA + KGAA VV++F T H+R Sbjct: 178 PKMIFVKAPFKIETSETEGIAIDHISKIAPIADGSKSSLHPYLGNVRDAVKMLDRQVDGLLRFLYAMKNGEAPLDHNLLRHISSICNQLPAMKSKRFDAA-FAQEYNDALLVSYLATLTKGAANANTVVDRFATTQERHHQR 318
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: H3GIZ2_PHYRM (COP9 signalosome complex subunit 6 n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3GIZ2_PHYRM) HSP 1 Score: 82.8 bits (203), Expect = 4.430e-16 Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 420 P IFV F ++T++ E I+++H+ K P AS+ LH +++ L ++ VL FL A++ G AP DH LLR IS + QLPAM++ AA E+ DAL V+YLA + KGA VV++F T H+R Sbjct: 181 PKMIFVKAPFKIDTSEAEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRFLQAMKDGEAPLDHNLLRHISSICNQLPAMKSEHFDAA-FTQEYNDALLVSYLATLTKGATNANTVVDRFAATQERHHQR 321
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A662YFC3_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFC3_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 5.360e-16 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 420 P IFV F +ET++ E IS++H+ K P AS+ LH +++ L ++ VL FL A+++G AP DH LLR IS + QLPAM++ A E+ DAL V YLA + KGA V+++F T +RH+R Sbjct: 117 PKMIFVKAPFKIETSESEGISIDHISKIAPVGDASKSALHPYLGNVRDAVKMLDRQVDVLVRFLQAMKNGEAPMDHNLLRHISSICNQLPAMKSQHFDGA-FTQEYNDALLVAYLATLTKGATNANTVIDRFTATQ-ERHQR 256
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: D0N0B5_PHYIT (COP9 signalosome complex subunit 6 n=5 Tax=Peronosporaceae TaxID=4777 RepID=D0N0B5_PHYIT) HSP 1 Score: 82.0 bits (201), Expect = 8.340e-16 Identity = 55/142 (38.73%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 420 P IFV F +ET++ E I+++H+ K P AS+ LH +++ L ++ VL FL +++G AP +H LLR IS + QLPAM++ A A E+ DAL V+YLAA+ KGA VV++F T H+R Sbjct: 179 PKMIFVKAPFKIETSETEGIAIDHISKIAPVGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRFLQTMKNGEAPLNHNLLRHISSICNQLPAMKSEHFDTA-FAQEYNDALLVSYLAALTKGATNANTVVDRFTTTQERHHQR 319
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A5D6XJP9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP9_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.510e-15 Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 1 PTTIFVPMGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRRA 423 PT +FV F +ET++ E ISV+H+ K P +S+ LH +++ L ++ VL FL A+++G AP D LLR IS + QLPAM + A+ L E+ DAL V +LA + KGA VV++F T DRH R+ Sbjct: 174 PTMLFVKAPFKIETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAMKMLDRQVDVLVRFLQAMKNGDAPMDRNLLRHISSVCNQLPAMTSKSFDASFL-QEYNDALLVAFLATLTKGATNANTVVDRFSATQ-DRHSRS 314 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12189.1.1 >prot_P-wetherbeei_contig12189.1.1 ID=prot_P-wetherbeei_contig12189.1.1|Name=mRNA_P-wetherbeei_contig12189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp MGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRVback to top mRNA from alignment at P-wetherbeei_contig12189:1178..2031- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12189.1.1 ID=mRNA_P-wetherbeei_contig12189.1.1|Name=mRNA_P-wetherbeei_contig12189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=854bp|location=Sequence derived from alignment at P-wetherbeei_contig12189:1178..2031- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12189:1178..2031- >mRNA_P-wetherbeei_contig12189.1.1 ID=mRNA_P-wetherbeei_contig12189.1.1|Name=mRNA_P-wetherbeei_contig12189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig12189:1178..2031- (Phaeothamnion wetherbeei SAG_119_79)back to top |