mRNA_P-wetherbeei_contig1218.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A3C0TWV6_9PROT (Transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TWV6_9PROT) HSP 1 Score: 199 bits (507), Expect = 2.090e-63 Identity = 98/124 (79.03%), Postives = 109/124 (87.90%), Query Frame = 1 Query: 1 MTPNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 372 M+ AI P GNE AHAEE+LSR FFALSDP+RR+ILERLRE P LVSELAAPFD+S+QAVS+HIQVLVRAGLV+QSRTGRISTCSLD+GPMF AAVWINRYSHYWQ QFDTLA +L+ I RR Sbjct: 1 MSTAHAIEPAAGNEAAHAEELLSRVFFALSDPLRRSILERLREQPSLVSELAAPFDVSIQAVSRHIQVLVRAGLVRQSRTGRISTCSLDVGPMFDAAVWINRYSHYWQTQFDTLAHSLEKIARR 124
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A5C8PHZ8_9HYPH (Helix-turn-helix transcriptional regulator n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PHZ8_9HYPH) HSP 1 Score: 166 bits (420), Expect = 3.490e-50 Identity = 85/119 (71.43%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 16 AILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 372 A+L + G + A ++L R FFALSDPVRRAIL+RL E LLVSELAAPFDISLQAVS+HIQVLVRAGLV+Q RTGRIS CSL +GP+ +AAVWIN YS YWQAQFDTLA AL++I+ R Sbjct: 6 AMLQVVGGADP-AADLLDRVFFALSDPVRRAILDRLGEEALLVSELAAPFDISLQAVSRHIQVLVRAGLVRQERTGRISRCSLVVGPIQAAAVWINHYSKYWQAQFDTLAAALEEIEER 123
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A6G6WSW0_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WSW0_9HYPH) HSP 1 Score: 160 bits (405), Expect = 5.340e-48 Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 1 Query: 37 NEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDR 369 N+ + L + FFALSDPVRRAILERL P+LVS+LA PF+ISLQAVS+HIQVLVRAGL+ Q RTGRIS CSL IGP++SAAVWINRYS YWQ QFDTLAGAL I++ Sbjct: 12 NDAVNETASLDQVFFALSDPVRRAILERLDGQPMLVSQLAEPFNISLQAVSRHIQVLVRAGLIAQERTGRISRCSLTIGPIYSAAVWINRYSKYWQEQFDTLAGALDGIEK 122
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A370K8G9_9GAMM (ArsR family transcriptional regulator n=2 Tax=Dyella solisilvae TaxID=1920168 RepID=A0A370K8G9_9GAMM) HSP 1 Score: 160 bits (405), Expect = 7.540e-48 Identity = 83/122 (68.03%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 7 PNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 372 P ++ TG + A+ L + FFALSDPVRR ILERL LLVSELAA FDISLQAVS+HIQVLVR GLVQQ RTGRIS CSLD GPM AAVW+NRYS YWQ QFD LA L DID R Sbjct: 5 PTLRVVDHTGQDPDLAQARLDQVFFALSDPVRREILERLDGQALLVSELAASFDISLQAVSRHIQVLVRTGLVQQERTGRISRCSLDAGPMLEAAVWMNRYSKYWQQQFDLLAATLADIDER 126
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A1I2FX14_9GAMM (DNA-binding transcriptional regulator, ArsR family n=5 Tax=Rhodanobacteraceae TaxID=1775411 RepID=A0A1I2FX14_9GAMM) HSP 1 Score: 160 bits (405), Expect = 7.540e-48 Identity = 88/132 (66.67%), Postives = 95/132 (71.97%), Query Frame = 1 Query: 31 TGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI-----PPRKSHGKPKP 411 TG A+E L++ FFALSDPVRR ILERL LLVSELAA FDISLQAVS+HIQVLVR GL+QQ RTGRIS CSLD GPM AAVWINRYS YWQ QFD LA L DID R P RK+ K +P Sbjct: 14 TGQNPELAQERLNQVFFALSDPVRRDILERLDGQVLLVSELAAAFDISLQAVSRHIQVLVRTGLIQQERTGRISRCSLDAGPMLEAAVWINRYSKYWQQQFDLLAVTLADIDERRAASPSKPARKAAKKRRP 145
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A534IA97_9GAMM (Helix-turn-helix transcriptional regulator n=8 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534IA97_9GAMM) HSP 1 Score: 160 bits (404), Expect = 1.100e-47 Identity = 79/115 (68.70%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 34 GNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI 378 G + A++ L R FFALSDPVRR ILERL LLVSELAAP++ISLQAVS+HIQVLVRAGL+QQ RTGRIS CSLD GP+ AAVW+NRYS YWQ QFD LA L +ID R + Sbjct: 15 GPDPDFAQDRLDRVFFALSDPVRRQILERLDGQALLVSELAAPYEISLQAVSRHIQVLVRAGLIQQERTGRISRCSLDAGPLLDAAVWMNRYSKYWQQQFDVLAATLSEIDERRM 129
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A370X7R8_9GAMM (ArsR family transcriptional regulator n=2 Tax=Dyella psychrodurans TaxID=1927960 RepID=A0A370X7R8_9GAMM) HSP 1 Score: 159 bits (402), Expect = 2.150e-47 Identity = 88/138 (63.77%), Postives = 95/138 (68.84%), Query Frame = 1 Query: 1 MTPNQAILPI--TGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNIPPRKSHGKPK 408 MT Q + + G + A+ L + FFALSDPVRR ILERL LLVSELAA FDISLQAVS+HIQVLVR GLVQQ RTGRIS CSLD GPM AAVW+NRYS YWQ QFD LA L DID R KS PK Sbjct: 1 MTIRQTLRAVGEAGLDPDAAQAQLDQVFFALSDPVRREILERLDGQALLVSELAAAFDISLQAVSRHIQVLVRTGLVQQERTGRISRCSLDAGPMLDAAVWMNRYSKYWQQQFDMLAATLADIDERKAKQPKSAQSPK 138
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A328P7M0_9GAMM (HTH arsR-type domain-containing protein n=3 Tax=Dyella TaxID=231454 RepID=A0A328P7M0_9GAMM) HSP 1 Score: 156 bits (394), Expect = 3.650e-46 Identity = 80/122 (65.57%), Postives = 92/122 (75.41%), Query Frame = 1 Query: 7 PNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 372 P QA+ TG + A+ L + FFALSDP+RR ILE+L LLVSE+AA FD+SLQAVS+HIQVLVRAGL+QQ RTGRIS CSLD GP+ AAVW+NRYS YWQ QFD LA L DID R Sbjct: 7 PLQAVTD-TGFDPELAQSRLDQVFFALSDPIRRQILEQLDGQALLVSEIAAAFDVSLQAVSRHIQVLVRAGLIQQERTGRISRCSLDAGPLLDAAVWMNRYSKYWQQQFDLLAATLADIDER 127
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: UPI001F34D575 (metalloregulator ArsR/SmtB family transcription factor n=1 Tax=Dyella sp. 2HG41-7 TaxID=2883239 RepID=UPI001F34D575) HSP 1 Score: 156 bits (394), Expect = 3.650e-46 Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 52 AEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI 378 A+ L FFALSDPVRR ILERL LLVSELAA FDISLQAVS+HIQVLVR GL+QQ RTGRIS CSLD GPM AAVW+NRYS YWQ QFD LA L DID R + Sbjct: 21 AQARLDEVFFALSDPVRRQILERLDGQALLVSELAASFDISLQAVSRHIQVLVRTGLIQQERTGRISRCSLDAGPMLDAAVWMNRYSKYWQQQFDLLAATLADIDERKM 129
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A370WYW6_9GAMM (ArsR family transcriptional regulator n=2 Tax=Dyella monticola TaxID=1927958 RepID=A0A370WYW6_9GAMM) HSP 1 Score: 155 bits (392), Expect = 7.110e-46 Identity = 82/128 (64.06%), Postives = 92/128 (71.88%), Query Frame = 1 Query: 1 MTPNQAILPIT--GNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI 378 MT A+ ++ G + A+ L FFALSDPVRR ILE+L LLVSELAA FDISLQAVS+HIQVLVR GL+QQ RTGRIS CSLD GPM AAVW+NRYS YWQ QFD LA L DID R + Sbjct: 1 MTIGHALRAVSESGLDPDRAQARLDEVFFALSDPVRRQILEQLDGQALLVSELAASFDISLQAVSRHIQVLVRTGLIQQERTGRISRCSLDAGPMLEAAVWMNRYSKYWQQQFDILAATLADIDDRRL 128 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1218.8.1 >prot_P-wetherbeei_contig1218.8.1 ID=prot_P-wetherbeei_contig1218.8.1|Name=mRNA_P-wetherbeei_contig1218.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MTPNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSEback to top mRNA from alignment at P-wetherbeei_contig1218:6771..7217- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1218.8.1 ID=mRNA_P-wetherbeei_contig1218.8.1|Name=mRNA_P-wetherbeei_contig1218.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig1218:6771..7217- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1218:6771..7217- >mRNA_P-wetherbeei_contig1218.8.1 ID=mRNA_P-wetherbeei_contig1218.8.1|Name=mRNA_P-wetherbeei_contig1218.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig1218:6771..7217- (Phaeothamnion wetherbeei SAG_119_79)back to top |