mRNA_P-wetherbeei_contig1218.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A3C0TWQ2_9PROT (Transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TWQ2_9PROT) HSP 1 Score: 229 bits (583), Expect = 6.860e-75 Identity = 113/150 (75.33%), Postives = 134/150 (89.33%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
ML LTKKMR+ALEAVVDIAYNARP PVQSRE+T+RQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRI+VGEIIRV+G+ ++++ E+ S LG VI+PLW+EMQ EMMRRFD++T+EDLC+RAD + + PEQ++QADF I
Sbjct: 1 MLLLTKKMRFALEAVVDIAYNARPEPVQSREITKRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRITVGEIIRVVGEVEEDNGAG-ESQSQLGAAVISPLWEEMQTEMMRRFDNVTIEDLCRRADASRIQPEQQRQADFTI 149
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A351T249_9PROT (Transcriptional regulator n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T249_9PROT) HSP 1 Score: 224 bits (570), Expect = 6.780e-73 Identity = 113/150 (75.33%), Postives = 126/150 (84.00%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
M RLTKKMR+ALEAVVDIAYNARP PVQSRE+T+RQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRV+G ++ + ET S LG +I PLWDE+Q EMM R D+I+VEDLC RA +APE R+ ADFNI
Sbjct: 1 MFRLTKKMRFALEAVVDIAYNARPHPVQSREITRRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVVGALENTPVAEAETCSPLGVQIIGPLWDEVQQEMMARLDAISVEDLCARARDVGIAPESRRPADFNI 150
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A2D4VLA2_9HYPH (Transcriptional regulator n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VLA2_9HYPH) HSP 1 Score: 199 bits (506), Expect = 3.650e-63 Identity = 101/150 (67.33%), Postives = 122/150 (81.33%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
MLRL+KK ALEAVVD+A NARP PVQS+E+TQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRI+ GE++RV+G + +D TE+ SAL Q VI PLW+E+QAE+M + D++T+EDLC++A+ V E ADF I
Sbjct: 1 MLRLSKKTWLALEAVVDVAINARPDPVQSKEITQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRITAGEVVRVVGAMEASDEPATESPSALSQRVIAPLWEEVQAEVMEKLDAVTIEDLCRKAEATGVGAET-PSADFTI 149
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A1Y5RSQ8_9PROT (HTH-type transcriptional regulator IscR n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5RSQ8_9PROT) HSP 1 Score: 196 bits (499), Expect = 4.540e-62 Identity = 98/151 (64.90%), Postives = 124/151 (82.12%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETV-SALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
ML+L KK +ALEAVVDIAYNARP PVQS+E+T+RQGIPQRYLEQVMQQLV A ILKGVRGPRGGYTLARERRRISVGEI+RV+ +++A+ E + SA+G+ V+ PLWDE++A+++RR D +T+E+LC+RA K + E R + DF I
Sbjct: 1 MLKLPKKTLFALEAVVDIAYNARPEPVQSKEITRRQGIPQRYLEQVMQQLVRAGILKGVRGPRGGYTLARERRRISVGEILRVVDGFAEDEADAREPLGSAIGREVVYPLWDELRADLVRRLDEVTLEELCRRAGKVGIRAENRNKLDFTI 151
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A317E8I3_9PROT (Transcriptional regulator n=4 Tax=Rhodospirillales TaxID=204441 RepID=A0A317E8I3_9PROT) HSP 1 Score: 196 bits (498), Expect = 7.100e-62 Identity = 101/154 (65.58%), Postives = 121/154 (78.57%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDT----DDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
MLRL++KM +ALEAVVDIAYNARP PVQS+E+T+RQGIPQRYLEQVMQQLVHA +LKGVRGP+GGY LARERRRI+VGEIIRV+G DD E S LG+ V+ PLW E+ +M + DSITVEDLC+RA+ A V E R++ DF+I
Sbjct: 1 MLRLSRKMLFALEAVVDIAYNARPEPVQSKEITRRQGIPQRYLEQVMQQLVHAGVLKGVRGPKGGYRLARERRRITVGEIIRVVGAIESAEDDESGEGAPMTSDLGKKVVQPLWGELHDTIMAKLDSITVEDLCRRAESAGVHSEGRERMDFSI 154
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A1Y5ECU0_9PROT (Transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium 46_93_T64 TaxID=1856292 RepID=A0A1Y5ECU0_9PROT) HSP 1 Score: 190 bits (483), Expect = 1.200e-59 Identity = 95/150 (63.33%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
ML L KKM YALEAVVDIA+NARP PVQS+E+TQRQGIPQRYLEQVMQQLVHA ILKGVRGPRGGY LARERRRI+ G+I+RVIG D+ + + S +GQ V+ PLW + Q+ M+++ D +T+E+LC+RAD + R DFNI
Sbjct: 1 MLHLPKKMLYALEAVVDIAFNARPNPVQSKEITQRQGIPQRYLEQVMQQLVHAGILKGVRGPRGGYRLARERRRITAGDIVRVIGAADEAEGQSQIFTSEIGQKVVGPLWVDAQSAMLKQLDMVTLEELCRRADADCQSDVSRSTNDFNI 150
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A2N3ELV1_9PROT (Transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3ELV1_9PROT) HSP 1 Score: 190 bits (482), Expect = 1.640e-59 Identity = 97/150 (64.67%), Postives = 118/150 (78.67%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
MLRL+KK ALEAVVDIA NARP PVQS+E+T+RQGIPQRYLEQVMQQLVHA ILKGVRGPRGGYTLARERRRI VGE++RV+G + +D S LG+ VI PLW ++Q E+M++ D IT+EDLC++A++A V R +DF I
Sbjct: 1 MLRLSKKTWLALEAVVDIAINARPDPVQSKEITKRQGIPQRYLEQVMQQLVHAGILKGVRGPRGGYTLARERRRIPVGEVVRVVGAMEASDEPANSVPSDLGERVIAPLWQDVQRELMKKLDGITIEDLCRKAEEAGVE-NSRSTSDFTI 149
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A7HZB9_PARL1 (Transcriptional regulator, BadM/Rrf2 family n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A7HZB9_PARL1) HSP 1 Score: 186 bits (472), Expect = 5.460e-58 Identity = 95/150 (63.33%), Postives = 117/150 (78.00%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
MLRL+KK ALEAVVD+A NARP PVQS+E+T+RQGIPQRYLEQVMQQLVHA ILKGVRGPRGGYTLARERRRI VGE++RV+G + +D S LG+ VI PLW E+Q E+M + D+IT+ED+C++A++ V + ADF I
Sbjct: 1 MLRLSKKTWLALEAVVDVAINARPDPVQSKEITKRQGIPQRYLEQVMQQLVHAGILKGVRGPRGGYTLARERRRIPVGEVVRVVGAMEASDEPTATAPSELGERVIAPLWQEVQRELMAKLDNITIEDMCRKAEEVGVGTS-KPTADFII 149
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A6N6VSK9_9HYPH (Rrf2 family transcriptional regulator n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VSK9_9HYPH) HSP 1 Score: 186 bits (472), Expect = 5.460e-58 Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
MLRL+KK ALEAVVD+A NARP PVQS+E+T+RQGIPQRYLEQVMQQLVHA ILKGVRGPRGGY LARERRRI+VGE++RV+G + D T S LG+ VI PLW+E+Q ++M R + IT++DLC+RA+ A A + ADF I
Sbjct: 1 MLRLSKKTWLALEAVVDVAINARPDPVQSKEITKRQGIPQRYLEQVMQQLVHAGILKGVRGPRGGYRLARERRRITVGEVVRVVGAMESADDPVTTGPSELGERVIAPLWEEVQRDLMERLEKITIDDLCRRAESASAAIDT-PAADFTI 149
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Match: A0A2E5BT65_9HYPH (Transcriptional regulator n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BT65_9HYPH) HSP 1 Score: 186 bits (472), Expect = 5.460e-58 Identity = 95/150 (63.33%), Postives = 118/150 (78.67%), Query Frame = 1
Query: 1 MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLVHANILKGVRGPRGGYTLARERRRISVGEIIRVIGDTDDNDAEKTETVSALGQTVINPLWDEMQAEMMRRFDSITVEDLCKRADKAHVAPEQRKQADFNI 450
M+RL+KK ALEAV+D+A NARP PVQS+++T+RQGIPQRYLEQVMQQLVHA ILKGVRGP+GGY LARERRRISVG+I+R++G + + E T SALG+ VI P+WD +Q+EMM R D++TVEDLC A K E + +ADF I
Sbjct: 1 MVRLSKKTLLALEAVLDVAVNARPDPVQSKDITRRQGIPQRYLEQVMQQLVHAGILKGVRGPKGGYRLARERRRISVGDIVRIVGAMEIAE-EPRSTPSALGEKVIEPMWDAIQSEMMLRLDAVTVEDLCLEAAKLGADGEDKPEADFTI 149 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1218.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1218.3.1 >prot_P-wetherbeei_contig1218.3.1 ID=prot_P-wetherbeei_contig1218.3.1|Name=mRNA_P-wetherbeei_contig1218.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp MLRLTKKMRYALEAVVDIAYNARPAPVQSREVTQRQGIPQRYLEQVMQQLback to top mRNA from alignment at P-wetherbeei_contig1218:2386..2838+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1218.3.1 ID=mRNA_P-wetherbeei_contig1218.3.1|Name=mRNA_P-wetherbeei_contig1218.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig1218:2386..2838+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1218:2386..2838+ >mRNA_P-wetherbeei_contig1218.3.1 ID=mRNA_P-wetherbeei_contig1218.3.1|Name=mRNA_P-wetherbeei_contig1218.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig1218:2386..2838+ (Phaeothamnion wetherbeei SAG_119_79)back to top |