mRNA_P-wetherbeei_contig12178.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12178.1.2
Unique NamemRNA_P-wetherbeei_contig12178.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: D7G6B7_ECTSI (Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B7_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 7.960e-104
Identity = 177/251 (70.52%), Postives = 205/251 (81.67%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQ-RRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVRE 750
            VWCS +QIYNEQ+FDML+DPQR  PL++ E   +G  IYVQ LSE+AV +A ECLQLLR G EHRAIRETHMNQ SSRSHSI Q+V+EQ RR+E  GER+LRSKFNLVDLAGSEKWD K+   M + R+SEMT+INVSLYTLGRVIA+LS   T  + G GG +  HVPYRDSKLTRLLQDSLGGNT+TR+I TLSPAS  VDET+S LRFADRAKQVMA VR+NE RPVD+A V RL+ EV HLR +V++
Sbjct:  174 VWCSGVQIYNEQLFDMLRDPQRIHPLAIHEQAEAG--IYVQGLSEYAVRSARECLQLLRVGREHRAIRETHMNQASSRSHSIFQIVVEQKRRSEQDGERILRSKFNLVDLAGSEKWDVKQD--MAEVRVSEMTNINVSLYTLGRVIAALS---TPNSHGEGGARKGHVPYRDSKLTRLLQDSLGGNTRTRIIATLSPASQSVDETISTLRFADRAKQVMAFVRVNERRPVDHALVHRLQAEVNHLRGLVQD 417          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: A0A835ZG83_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG83_9STRA)

HSP 1 Score: 310 bits (793), Expect = 3.840e-96
Identity = 165/260 (63.46%), Postives = 203/260 (78.08%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQR--RTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGG-----GGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVRELTG 759
            +WCS++QIYNEQVFDML+DPQRSRPL++ ED  +G   Y Q LSE+AVH+A ECLQLL  GEEHRA+RETHMNQ SSRSHSI Q+ +EQR    E  GER+LRSKFNLVDLAGSEKWD ++  +M + R+SEMT+INVSLYTLGRVI++LS +  +   GG     G     H+PYRDSKLTRLL+DSLGGNT+T L+ TLSP++ CVDET+S LRFA RAK + +LVR+NE R VD A V++L+ EV  LRA+V+ L G
Sbjct:  187 IWCSLVQIYNEQVFDMLRDPQRSRPLAIHEDATAG--TYCQGLSEYAVHSAEECLQLLHTGEEHRAVRETHMNQASSRSHSIFQVTVEQRLWEGEDGGERLLRSKFNLVDLAGSEKWDVRQ--EMGEERVSEMTNINVSLYTLGRVISALSKKGAS--VGGALDADGNPAGAHIPYRDSKLTRLLRDSLGGNTRTCLVATLSPSAACVDETISTLRFASRAKTIASLVRINERRAVDRAMVEKLQGEVARLRALVKRLAG 440          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: A0A7S2R728_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R728_9STRA)

HSP 1 Score: 300 bits (768), Expect = 2.830e-92
Identity = 160/252 (63.49%), Postives = 198/252 (78.57%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVRELT 756
            V+CS +QIYNEQ+FDML+DP R  PL V ED   G  I+VQ LSE++V    +C++LLR GEE+RAIRETHMNQ SSRSHSI QL++EQ+R + + +R LRSKFNLVDLAGSEKWD  +S  ME  R++EMT+IN+SLYTLGR IA+L+A A       G     HVP+R+SKLTRLLQDSLGGN KTR+I TLSPASDCV+E++S L+FADRAKQVM  +R N  RPVD+A VQRL+REV HLR ++RE++
Sbjct:  216 VYCSFVQIYNEQLFDMLRDPSRGHPLEVHEDPKDG--IFVQGLSEYSVRGFHDCMELLRLGEENRAIRETHMNQASSRSHSIFQLLVEQKRVDGSNQRELRSKFNLVDLAGSEKWDLNQS--MEADRVAEMTNINLSLYTLGRCIAALAAAARR-----GLSAADHVPFRESKLTRLLQDSLGGNAKTRVIATLSPASDCVEESVSTLKFADRAKQVMVFLRKNVNRPVDFALVQRLQREVAHLRNLLREIS 458          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: A0A0W8D0P7_PHYNI (Kinesin-like protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D0P7_PHYNI)

HSP 1 Score: 281 bits (720), Expect = 1.570e-87
Identity = 148/251 (58.96%), Postives = 198/251 (78.88%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVREL 753
            V+CS +Q+YNEQ+FD+L+D Q + PL + ED  +G  I+V+ LSE+AV + ++CLQLL+ GE++RA+R THMNQ+SSRSHS+ QL+LEQRR + T    L+SKFNLVDLAGSEKW+     +M +  ISEMT+IN+SL+TLGR IASLS+++T  +T        HVPYRDSKLTRLLQDSLGGNTKT++I TLSP+ DCV+E++S L+FADRAK+VM +VR+NE+R +D A V++L+ E+  LR VVR L
Sbjct:  148 VYCSFVQVYNEQIFDLLRDTQMNTPLEIHEDRKNG--IFVEGLSEYAVRSVSDCLQLLQCGEQNRAVRSTHMNQVSSRSHSVFQLLLEQRRKDGTA---LKSKFNLVDLAGSEKWNM--GAEMREHHISEMTNINLSLHTLGRCIASLSSKSTGGST--------HVPYRDSKLTRLLQDSLGGNTKTKIIATLSPSLDCVEESISTLKFADRAKKVMVMVRVNEQREIDPAYVEKLQEELEQLREVVRLL 383          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: A0A225WA81_9STRA (Kinesin-like protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WA81_9STRA)

HSP 1 Score: 281 bits (720), Expect = 4.010e-87
Identity = 151/251 (60.16%), Postives = 199/251 (79.28%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVREL 753
            V+CS +QIYNEQ+FD+L+D Q + PL + ED  +G  IYV+ LSE+AV   ++CLQLL+ GE++RA+R THMNQ+SSRSHS+ QL+LEQRR + T   +L+SKFNLVDLAGSEKW+     +M++  ISEMT+IN+SL+TLGR IA+LS ++T  ATG       HVPYRDSKLTRLLQDSLGGNTKT++I TLSP+ DCV+E++S L+FADRAK+VM +VR+NE+R +D A V++L+ E+  LR VVR L
Sbjct:  159 VFCSFVQIYNEQIFDLLRDTQMNTPLDIHEDRKNG--IYVEGLSEYAVRGVSDCLQLLQCGEQNRAVRSTHMNQVSSRSHSVFQLLLEQRRKDGT---LLKSKFNLVDLAGSEKWNM--GAEMKEHHISEMTNINLSLHTLGRCIAALSTKSTV-ATG-------HVPYRDSKLTRLLQDSLGGNTKTKIIATLSPSLDCVEESISTLKFADRAKKVMVMVRVNEQREIDPAYVEKLQEELEQLREVVRLL 394          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: A0A2P4XSN5_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSN5_9STRA)

HSP 1 Score: 279 bits (714), Expect = 3.460e-86
Identity = 148/251 (58.96%), Postives = 198/251 (78.88%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVREL 753
            V+CS +QIYNEQ+FD+L+D Q + PL + ED  +G  I+V+ LSE+AV + ++CLQLL+ GE++RA+R THMNQ+SSRSHS+ QL LEQRR + T   VL+SKFNLVDLAGSEKW+     +M++  ISEMT+IN+SL+TLGR IA+LS+++T  +         HVPYRDSK+TRLLQDSLGGNTKT++I TLSP+ DCV+E++S L+FADRAK+VM +VR+NE+R VD A V++L+ E+  LR VVR L
Sbjct:  171 VYCSFVQIYNEQIFDLLRDTQMNTPLEIHEDRKNG--IFVEGLSEYAVRSVSDCLQLLQCGEQNRAVRSTHMNQVSSRSHSVFQLFLEQRRKDGT---VLKSKFNLVDLAGSEKWNM--GTEMKEHHISEMTNINLSLHTLGRCIAALSSKSTGSSA--------HVPYRDSKITRLLQDSLGGNTKTKIIATLSPSLDCVEESISTLKFADRAKKVMVMVRVNEQREVDPAYVEKLQEELEQLREVVRLL 406          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: A0A2P4XU85_9STRA (Kinesin-like protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU85_9STRA)

HSP 1 Score: 279 bits (714), Expect = 6.480e-86
Identity = 148/251 (58.96%), Postives = 198/251 (78.88%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVREL 753
            V+CS +QIYNEQ+FD+L+D Q + PL + ED  +G  I+V+ LSE+AV + ++CLQLL+ GE++RA+R THMNQ+SSRSHS+ QL LEQRR + T   VL+SKFNLVDLAGSEKW+     +M++  ISEMT+IN+SL+TLGR IA+LS+++T  +         HVPYRDSK+TRLLQDSLGGNTKT++I TLSP+ DCV+E++S L+FADRAK+VM +VR+NE+R VD A V++L+ E+  LR VVR L
Sbjct:  173 VYCSFVQIYNEQIFDLLRDTQMNTPLEIHEDRKNG--IFVEGLSEYAVRSVSDCLQLLQCGEQNRAVRSTHMNQVSSRSHSVFQLFLEQRRKDGT---VLKSKFNLVDLAGSEKWNM--GTEMKEHHISEMTNINLSLHTLGRCIAALSSKSTGSSV--------HVPYRDSKITRLLQDSLGGNTKTKIIATLSPSLDCVEESISTLKFADRAKKVMVMVRVNEQREVDPAYVEKLQEELEQLREVVRLL 408          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: W2R4B7_PHYPN (Kinesin-like protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2R4B7_PHYPN)

HSP 1 Score: 281 bits (720), Expect = 8.680e-86
Identity = 148/251 (58.96%), Postives = 198/251 (78.88%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVREL 753
            V+CS +Q+YNEQ+FD+L+D Q + PL + ED  +G  I+V+ LSE+AV + ++CLQLL+ GE++RA+R THMNQ+SSRSHS+ QL+LEQRR + T    L+SKFNLVDLAGSEKW+     +M +  ISEMT+IN+SL+TLGR IASLS+++T  +T        HVPYRDSKLTRLLQDSLGGNTKT++I TLSP+ DCV+E++S L+FADRAK+VM +VR+NE+R +D A V++L+ E+  LR VVR L
Sbjct:  189 VYCSFVQVYNEQIFDLLRDTQMNTPLEIHEDRKNG--IFVEGLSEYAVRSVSDCLQLLQCGEQNRAVRSTHMNQVSSRSHSVFQLLLEQRRKDGTA---LKSKFNLVDLAGSEKWNM--GAEMREHHISEMTNINLSLHTLGRCIASLSSKSTGGST--------HVPYRDSKLTRLLQDSLGGNTKTKIIATLSPSLDCVEESISTLKFADRAKKVMVMVRVNEQREIDPAYVEKLQEELEQLREVVRLL 424          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: D0N2A3_PHYIT (Kinesin-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N2A3_PHYIT)

HSP 1 Score: 281 bits (718), Expect = 1.280e-85
Identity = 149/251 (59.36%), Postives = 198/251 (78.88%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVREL 753
            V+CS +Q+YNE +FD+L+D Q + PL + ED  +G  I+V+ LSE+AV + ++CLQLL+ GE++RA+R THMNQ+SSRSHS+ QL+LEQRR + T    L+SKFNLVDLAGSEKW+T    +M +  ISEMT+IN+SL+TLGR IASLS+++T    GG      HVPYRDSKLTRLLQDSLGGNTKT++I TLSP+ DCV+E++S L+FADRAK+VM +VR+NE+R +D A V++L+ E+  LR VVR L
Sbjct:  173 VYCSFVQVYNEHIFDLLRDTQMNTPLEIHEDRKNG--IFVEGLSEYAVRSVSDCLQLLQCGEQNRAVRSTHMNQVSSRSHSVFQLLLEQRRKDGT---FLKSKFNLVDLAGSEKWNT--GAEMREHHISEMTNINLSLHTLGRCIASLSSKST----GGSA----HVPYRDSKLTRLLQDSLGGNTKTKIIATLSPSLDCVEESISTLKFADRAKKVMVMVRVNEQREIDPAYVEKLQEELEQLREVVRLL 408          
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Match: K3WRM2_GLOUD (Kinesin-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRM2_GLOUD)

HSP 1 Score: 279 bits (713), Expect = 4.650e-85
Identity = 148/251 (58.96%), Postives = 193/251 (76.89%), Query Frame = 1
Query:    1 VWCSMLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAECLQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKFNLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATAFATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDETLSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVREL 753
            V+CS +QIYNEQ+FD+L+D   + PL + ED  +G  IYV+ LSE+AVH+  +CL LL+ GE+HRA+R THMNQ+SSRSHS+ QL+LEQ + + +   VL+SKFNLVDLAGSEKW++     M+   ISEMT+IN+SL+TLGR IASLS + +           +HVPYRDSKLTRLLQDSLGGNTKT++I TLSP+ DC+DE++S L+FADRAKQVM LVR+NE+R +D A V++L+ E+  LR VVR L
Sbjct:  184 VYCSFVQIYNEQIFDLLRDSNMNAPLEIHEDRKNG--IYVEGLSEYAVHSVNDCLTLLQCGEQHRAVRSTHMNQVSSRSHSVFQLMLEQHKQDGS---VLKSKFNLVDLAGSEKWNS--DSMMQHHHISEMTNINLSLHTLGRCIASLSTKTSG---------PKHVPYRDSKLTRLLQDSLGGNTKTKIIATLSPSMDCIDESISTLKFADRAKQVMVLVRVNEQREIDPAYVEKLQDELEKLREVVRLL 418          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12178.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B7_ECTSI7.960e-10470.52Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835ZG83_9STRA3.840e-9663.46Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2R728_9STRA2.830e-9263.49Kinesin-like protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A0W8D0P7_PHYNI1.570e-8758.96Kinesin-like protein n=1 Tax=Phytophthora nicotian... [more]
A0A225WA81_9STRA4.010e-8760.16Kinesin-like protein n=1 Tax=Phytophthora megakary... [more]
A0A2P4XSN5_9STRA3.460e-8658.96Kinesin-like protein (Fragment) n=1 Tax=Phytophtho... [more]
A0A2P4XU85_9STRA6.480e-8658.96Kinesin-like protein n=1 Tax=Phytophthora palmivor... [more]
W2R4B7_PHYPN8.680e-8658.96Kinesin-like protein n=9 Tax=Phytophthora TaxID=47... [more]
D0N2A3_PHYIT1.280e-8559.36Kinesin-like protein n=2 Tax=Phytophthora infestan... [more]
K3WRM2_GLOUD4.650e-8558.96Kinesin-like protein n=1 Tax=Globisporangium ultim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12178contigP-wetherbeei_contig12178:45..2033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G6B7
PFAMsKinesin
Model size960
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue5.81e-101
EggNOG OGsCOG5059@1|root,KOG4280@2759|Eukaryota
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-10_001260.1
Descriptionmicrotubule motor activity
Cds size948
COG categoryZ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12178.1.2prot_P-wetherbeei_contig12178.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12178 57..2033 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185940.3035831-UTR-P-wetherbeei_contig12178:44..561683185940.3035831-UTR-P-wetherbeei_contig12178:44..56Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12178 45..56 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185940.313354-CDS-P-wetherbeei_contig12178:56..1361683185940.313354-CDS-P-wetherbeei_contig12178:56..136Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12178 57..136 +
1683185940.3218172-CDS-P-wetherbeei_contig12178:190..2921683185940.3218172-CDS-P-wetherbeei_contig12178:190..292Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12178 191..292 +
1683185940.3302875-CDS-P-wetherbeei_contig12178:553..6681683185940.3302875-CDS-P-wetherbeei_contig12178:553..668Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12178 554..668 +
1683185940.3496518-CDS-P-wetherbeei_contig12178:958..11321683185940.3496518-CDS-P-wetherbeei_contig12178:958..1132Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12178 959..1132 +
1683185940.3674598-CDS-P-wetherbeei_contig12178:1261..14261683185940.3674598-CDS-P-wetherbeei_contig12178:1261..1426Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12178 1262..1426 +
1683185940.374434-CDS-P-wetherbeei_contig12178:1721..20331683185940.374434-CDS-P-wetherbeei_contig12178:1721..2033Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12178 1722..2033 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12178.1.2

>prot_P-wetherbeei_contig12178.1.2 ID=prot_P-wetherbeei_contig12178.1.2|Name=mRNA_P-wetherbeei_contig12178.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=316bp
MLQIYNEQVFDMLQDPQRSRPLSVREDGGSGGGIYVQSLSEFAVHTAAEC
LQLLRRGEEHRAIRETHMNQLSSRSHSILQLVLEQRRTEPTGERVLRSKF
NLVDLAGSEKWDTKRSGQMEDARISEMTSINVSLYTLGRVIASLSARATA
FATGGGGQQHQHVPYRDSKLTRLLQDSLGGNTKTRLIVTLSPASDCVDET
LSALRFADRAKQVMALVRLNEERPVDYATVQRLRREVRHLRAVVRELTGG
DGSGYSGGSGGNGDGRSSGTGGGGDGEDGSRSNADGNIGGGRGADNTAKL
MYARAALKRQMEETEA
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mRNA from alignment at P-wetherbeei_contig12178:45..2033+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12178.1.2 ID=mRNA_P-wetherbeei_contig12178.1.2|Name=mRNA_P-wetherbeei_contig12178.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1989bp|location=Sequence derived from alignment at P-wetherbeei_contig12178:45..2033+ (Phaeothamnion wetherbeei SAG_119_79)
GTGTGGTGCAGCATGCTGCAAATCTACAACGAGCAGGTGTTCGACATGCT GCAGGACCCGCAGCGGAGCCGTCCGCTGAGCGTTCGGGAGGAGTCGGACG GGGCGGCGGCGGGCGGCGGCGGCGACGGCAGGGGCAGCGGCAGCAGCGGT GGCAGCGGCGGCGGCATCTACGTGCAAAGCCTGAGCGAGTTTGCGGTGCA CACGGCCGCCGAATGCCTCCAGCTGCTGCGGCGCGGCGAGGAACACAGGT GGGATCTGTCTGTGGGTTGGAGATATGGGGTCGCTTGCTGTTTTGTTTGG GTTGTTTGGACTGGGGCGGATGCTGCAGTGTGTCTGTGGTTTTGACTTTA AATTATCAGGTCTCCATCGCCATCCCACTAGTGATACTTCAACCTACGCC CAGCATTCCGTGCGGTGTCTCCGGCCACACAATCTTGCGCTGCCCAATCC GGACTGCAAATTGGCGATTGGCGTTCCCTCCGGATGAACGCCCGCCTCGA TCGCTGCAGGGCTATCCGAGAGACGCACATGAATCAGCTGTCGAGCCGCA GCCACAGCATCCTGCAGCTCGTGCTGGAGCAGCGCCGCACCGAGCCCACC GGCGAGAGGGTCTTGCGCTCCAAGGTCAGAATAGCCCGCGAACGGAATGA CCTTCGGCGTTACGTTCCTCCCCACCTATGTACGATGCGCTTTGGGTTTC CCCTTCTTTCTTCTTCTGTTCGACTCTGGTCGGCCCCGTCCGGCCGCATA AGGTTGACAGTCAGGCCAGGCAGGTACACGCATCTCGAAGATCTGTCCTT CTGTTTTTGCTCCACTGTCGCAGAACTTTTGTAACTTTATCACCTCTGAC TCCTTCCGGCGGTGGTTACGGAAATGCGGGTGCTACGAATGCCGCGACCT GTTTCCGGGAACAGTTCAACCTGGTGGATCTGGCGGGCAGCGAGAAATGG GACACAAAGCGCAGCGGCCAGATGGAGGACGCCCGCATTAGCGAAATGAC CTCCATCAACGTCTCCCTCTACACGCTCGGCCGCGTCATCGCCTCCCTCA GCGCCCGCGCCACCGCTTTTGCCACCGGCGGCGGAGGCGTCCCAGCAATC GCTGCGGCTGCCCCAGCTCACGGCAGCAGCGGTGGCGGCGACGGCACCGG CAGCGCTAGCAATAGCGGCGGCGGTGGCGGCGGCGGTAACAGTGGGCGGC TGGCGCTGTCGCAGCAGCAGCAGCACCAGCATGTCCCGTACAGGGATTCC AAGTTGACACGCCTGCTTCAGGACTCTCTGGGAGGGAATACGAAGACGAG GCTCATTGTGACGCTGAGCCCCGCCAGCGACTGTGTCGATGAGACGCTGT CCGCGCTGCGATTCGCCGACCGCGCCAAGCAGGTGGGTAGGCGAGCAGTC TGAAGACCGGAAGGTTGGTATGCAGCTTTGGCAGGGGTGCTGGGTGCGCA ACGGGCGGCTGCAATGGCGGCGTGCTACCCAGTAAGGAGCAAGCTGGGAA ATTCAACTGCCAAATCGACCAGTCGCGGCCGTGCCGCCAACCTCTTGTTT GCTGCCATACTCTATCTTCCATGTCATTTGCTGCATGTTTCCACCCATAC CATCTGACCCTGCACTTTTCCGGATTTCTGTTGTTCTGCGATTGTGTTTT TCCTGTTTCCTCCTTCCCTTCGGCCAGGTAATGGCGCTCGTGCGGCTCAA TGAGGAGCGCCCCGTCGACTACGCGACGGTGCAGCGGCTCCGGCGGGAGG TCCGACACCTTCGCGCCGTCGTCCGGGAGCTGACCGGTGGCGATGGCAGC GGCTACAGCGGCGGCAGTGGCGGGAATGGCGACGGCAGGAGCAGTGGAAC CGGCGGTGGCGGCGATGGTGAGGACGGCAGCCGAAGCAACGCGGACGGAA ACATCGGCGGCGGCCGCGGGGCAGACAACACTGCGAAGCTGATGTACGCA CGGGCGGCCCTCAAACGGCAGATGGAGGAGACGGAAGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12178:45..2033+

>mRNA_P-wetherbeei_contig12178.1.2 ID=mRNA_P-wetherbeei_contig12178.1.2|Name=mRNA_P-wetherbeei_contig12178.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig12178:45..2033+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCAAATCTACAACGAGCAGGTGTTCGACATGCTGCAGGACCCGCA
GCGGAGCCGTCCGCTGAGCGTTCGGGAGGACGGTGGCAGCGGCGGCGGCA
TCTACGTGCAAAGCCTGAGCGAGTTTGCGGTGCACACGGCCGCCGAATGC
CTCCAGCTGCTGCGGCGCGGCGAGGAACACAGGGCTATCCGAGAGACGCA
CATGAATCAGCTGTCGAGCCGCAGCCACAGCATCCTGCAGCTCGTGCTGG
AGCAGCGCCGCACCGAGCCCACCGGCGAGAGGGTCTTGCGCTCCAAGTTC
AACCTGGTGGATCTGGCGGGCAGCGAGAAATGGGACACAAAGCGCAGCGG
CCAGATGGAGGACGCCCGCATTAGCGAAATGACCTCCATCAACGTCTCCC
TCTACACGCTCGGCCGCGTCATCGCCTCCCTCAGCGCCCGCGCCACCGCT
TTTGCCACCGGCGGCGGAGGCCAGCAGCACCAGCATGTCCCGTACAGGGA
TTCCAAGTTGACACGCCTGCTTCAGGACTCTCTGGGAGGGAATACGAAGA
CGAGGCTCATTGTGACGCTGAGCCCCGCCAGCGACTGTGTCGATGAGACG
CTGTCCGCGCTGCGATTCGCCGACCGCGCCAAGCAGGTAATGGCGCTCGT
GCGGCTCAATGAGGAGCGCCCCGTCGACTACGCGACGGTGCAGCGGCTCC
GGCGGGAGGTCCGACACCTTCGCGCCGTCGTCCGGGAGCTGACCGGTGGC
GATGGCAGCGGCTACAGCGGCGGCAGTGGCGGGAATGGCGACGGCAGGAG
CAGTGGAACCGGCGGTGGCGGCGATGGTGAGGACGGCAGCCGAAGCAACG
CGGACGGAAACATCGGCGGCGGCCGCGGGGCAGACAACACTGCGAAGCTG
ATGTACGCACGGGCGGCCCTCAAACGGCAGATGGAGGAGACGGAAGCG
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