mRNA_P-wetherbeei_contig12177.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 164 bits (415), Expect = 2.390e-46 Identity = 96/225 (42.67%), Postives = 134/225 (59.56%), Query Frame = 1
Query: 1 MVGKPLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLRLARG-LGLIVTAPT-PIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLPAPRTPFLRE 669
M P R VG ++YL V TRP++ V +L+Q DP W A +LRYL+ T GL ++R +R+ GY DADWA ++SRRS YVF+ +G +SW+SQ Q A S+ EAEY+A + A + A WL++ G LG + + + EDNQ +A + +R KHIDI +H VRE+VESGEVILE T+D LAD++TKP+ A + LR+
Sbjct: 32 MCNVPYRSAVGGIMYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFTREEGSRI------CGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFESLRD 250
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 159 bits (401), Expect = 8.230e-45 Identity = 92/210 (43.81%), Postives = 127/210 (60.48%), Query Frame = 1
Query: 13 PLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPL 639
P RELVGA++YLA +TRP I V + + C + W+AA +L+YLK T++ GL+++ + +GYADA+WA LD+RRS YVF +G+A+SW+S+ Q A S+ EAEY+A A+Q A WLR L + LG T I++DNQ C +A + R KHIDI FH +RE+VES V LE T + +AD TK L
Sbjct: 21 PCRELVGALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGEL------VGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKAL 224
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: A0A151R5Z5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R5Z5_CAJCA) HSP 1 Score: 156 bits (394), Expect = 1.290e-43 Identity = 90/220 (40.91%), Postives = 129/220 (58.64%), Query Frame = 1
Query: 19 RELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLPAPRTPFLRELI 675
R L+G++ YL +TRP++ V ++ D R W A +LRY+KGT GL +++S R+ IGY+D+DW +D R+S YVF A +W S+ Q A STCEAEYVAA+++VQHA WLR L R L ++ I DN+ ++A + + R KHID FH +RE+V+ G V LE +K+Q+ D+ TKPLPA LR+L+
Sbjct: 32 RSLIGSLRYLT-STRPDLMLSVGIASRFMEDLRYSHWKALKKILRYVKGTMSLGLCFTKSDNYRL------IGYSDSDWCGDVDDRKSTTGYVFFLGNTAFTWLSKKQPIVALSTCEAEYVAASWSVQHAVWLRNLLRKLEIMKAEKVLIRVDNRSAIELAKNSINHERSKHIDFRFHFIREKVKEGSVELEHVGSKEQVTDIFTKPLPATTFQELRKLL 244
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 160 bits (405), Expect = 1.300e-43 Identity = 93/224 (41.52%), Postives = 132/224 (58.93%), Query Frame = 1
Query: 13 PLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLPAPRTPFLRELILG 681
P RELVGA++YLA TRP+I V + + C + W+AA +L+YLK T++ GL+++ T + IGYADA WA LD+RRS YVF +G+A+SW+S+ Q A S+ EAEY+A A Q A WLR L +G A T I +DNQ C +A + R KHID+ +H +RE+VE ++LE T + +AD TK L P+ R+ ++G
Sbjct: 189 PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGEL------IGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKH---RQFLVG 403
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: A0A7D9I9A7_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I9A7_PARCT) HSP 1 Score: 157 bits (396), Expect = 1.380e-43 Identity = 93/220 (42.27%), Postives = 128/220 (58.18%), Query Frame = 1
Query: 19 RELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLPAPRTPFLRELI 675
++ +G + Y++ +TRP+I V L+Q +P + WL LLRY+KGT GL + + + GYADA+WA +D+RRS+ Y+F + A +SW S+ Q A ST EAE+VA + A Q A WLR L GLG PT I EDNQ +IA + R KHIDI F+ +RER+ES E+ +E T D LAD++TK LP R LR L+
Sbjct: 61 QQAIGCLTYVSTSTRPDIAAAVGLLSQYMSNPSKDHWLGIKRLLRYIKGTLTYGLKFVAN-----KNECDLHGYADANWAGDVDTRRSISGYIFKVADATISWSSKKQSTVAKSTTEAEFVALSQACQGAVWLRRLLSGLGCNTDGPTLIKEDNQGAIEIAKNPKFHNRTKHIDITFYFIRERIESREIKVEYCSTHDMLADIMTKALPRERFEKLRSLM 275
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 157 bits (398), Expect = 1.580e-43 Identity = 91/224 (40.62%), Postives = 131/224 (58.48%), Query Frame = 1
Query: 13 PLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLPAPRTPFLRELILG 681
P RELVGA++YLA TRP+I V + + C + W+AA +L+YLK T++ GL+++ T + IGYADA+WA LD+RRS YVF +G+A+SW+S+ Q A S+ EAEY+A A Q A WLR L +G T +DNQ C +A + R KHID+ +H +RE+VE ++LE T + +AD TK L P+ R+ ++G
Sbjct: 93 PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGEL------IGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKH---RQFLVG 307
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: A0A151QYP0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QYP0_CAJCA) HSP 1 Score: 158 bits (400), Expect = 3.830e-43 Identity = 89/220 (40.45%), Postives = 130/220 (59.09%), Query Frame = 1
Query: 19 RELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLPAPRTPFLRELI 675
R L+G++ YL +TRP++ V ++ DPR W A +LRY+KGT GL +++S R+ IGY+D+DW +D R+S YVF +A +W S+ Q A STCEAEYVAA+++VQHA WLR L L ++ I DN+ ++A + + R KHID+ FH +RE+V+ G V LE +K+Q+ D+ TKPLP LR+L+
Sbjct: 159 RSLIGSLRYLT-STRPDLMLSVGIASRFMEDPRYSHWKALKRILRYVKGTMSLGLCFTKSDNYRL------IGYSDSDWCGDVDDRKSTAGYVFFMGNSAFTWLSKKQPIVALSTCEAEYVAASWSVQHAVWLRNLLSKLEIMKAEKVLIRVDNRSAIELAKNPINHERSKHIDVRFHFIREKVKEGSVELEHVGSKEQVTDIFTKPLPTTTFQKLRKLL 371
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: A0A369JLS8_HYPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JLS8_HYPMA) HSP 1 Score: 161 bits (407), Expect = 7.300e-42 Identity = 98/222 (44.14%), Postives = 126/222 (56.76%), Query Frame = 1
Query: 13 PLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLPAPRTPFLRELI 675
P R LV +LYLA++TRP+I V+ L+Q W AA+W++RYLKGTR L + P +G+ D+DWA LD+RRSVG YV+ A+SW Q Q AAS+CEAEYVAA A + WLR L +G T + DN D++ D RVKHIDI FH +RERV+SGE+ L TKD +AD+ TKPL LR L+
Sbjct: 643 PYRSLVRCLLYLAISTRPDIAHAVQQLSQFLDSYSYAHWNAAIWVVRYLKGTRVLKLHLGGTN------PIELLGFTDSDWANCLDTRRSVGGYVWCLGRGALSWHVQKQKTVAASSCEAEYVAAFEATKECIWLRALLLAIGFGQPDSTTMLCDNNATIDLSEDPLLHARVKHIDIKFHFMRERVQSGEIQLRYINTKDNVADIFTKPLEPKTFTRLRGLL 858
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: UPI001D09786A (secreted RxLR effector protein 161-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D09786A) HSP 1 Score: 150 bits (380), Expect = 8.810e-42 Identity = 85/211 (40.28%), Postives = 124/211 (58.77%), Query Frame = 1
Query: 13 PLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLR-LARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTKPLP 642
P ++ VG++LY A +TRP+I V +++ +DP +P W A + RYLKGT K + YS+ + + +G++DADWA +D+R+SV YVFL G A+ W S+ Q A ST EAEY+A + VQ A WLR + L PT I+ DN+ D+A R KHID+ H +R+ + + E+IL P T++ AD+LTK LP
Sbjct: 5 PYQQAVGSLLYAAQSTRPDIAYAVSLVSRYNNDPGKPHWNAVKRIFRYLKGTINKKIQYSKHENSAI------MGFSDADWAGDVDNRKSVTGYVFLSQGGAICWNSKKQPTVALSTTEAEYMALSATVQEALWLRNFMKELDGKEAEPTKIYCDNKSAIDLAAIANYRPRTKHIDVRHHFIRQHILNNEIILSPVGTREMTADVLTKGLP 209
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Match: Q94FM1_CITPA (Pol polyprotein n=1 Tax=Citrus paradisi TaxID=37656 RepID=Q94FM1_CITPA) HSP 1 Score: 152 bits (385), Expect = 9.410e-42 Identity = 83/207 (40.10%), Postives = 121/207 (58.45%), Query Frame = 1
Query: 13 PLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLRYLKGTREKGLLYSRSTAARVRTPAVAIGYADADWARGLDSRRSVGEYVFLRSGAAVSWRSQMQDCTAASTCEAEYVAAAYAVQHAPWLRLARGLGLIVTAPTPIHEDNQLCSDIATDLFSERRVKHIDINFHTVRERVESGEVILEPTKTKDQLADLLTK 633
P +VG+++Y V TRP+I V +++ H+P + WLA W+LRYL GT + GLL+ ++ + +GY D+D+A LD +RS YVF G +VSWRS +Q A ST EAEY+AA AV+ A WL+ G ++ + DNQ +A + R KHID+ +H VRE +E G+V+L+ TKD +D+LTK
Sbjct: 77 PYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKNCGQQC------VGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTK 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12177.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12177.1.1 >prot_P-wetherbeei_contig12177.1.1 ID=prot_P-wetherbeei_contig12177.1.1|Name=mRNA_P-wetherbeei_contig12177.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp MVGKPLRELVGAVLYLAVTTRPEIFDQVRALTQCCHDPRRPDWLAALWLLback to top mRNA from alignment at P-wetherbeei_contig12177:38..724+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12177.1.1 ID=mRNA_P-wetherbeei_contig12177.1.1|Name=mRNA_P-wetherbeei_contig12177.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig12177:38..724+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12177:38..724+ >mRNA_P-wetherbeei_contig12177.1.1 ID=mRNA_P-wetherbeei_contig12177.1.1|Name=mRNA_P-wetherbeei_contig12177.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig12177:38..724+ (Phaeothamnion wetherbeei SAG_119_79)back to top |