mRNA_P-wetherbeei_contig12169.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12169.3.1
Unique NamemRNA_P-wetherbeei_contig12169.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: A0A351T4E8_9PROT (4-hydroxy-tetrahydrodipicolinate synthase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T4E8_9PROT)

HSP 1 Score: 442 bits (1138), Expect = 1.780e-154
Identity = 215/288 (74.65%), Postives = 243/288 (84.38%), Query Frame = 1
Query:   22 FFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGL 885
            F GS  ALITPFR+GKVD++AFQ FV+WQI QG+HGLVPCGTTGESPTL HDEHKRVVE+CIEAAAGRVPV+AGTGSNSTAEAID TVHAK+AGA  ALVV PYYNKPTQ+G+Y H+KAL +A D+PI IYNIPGR+ ++M ++TM RLA+LPNI GVKDA  D+ RTSLQR A+GPDFIQLSG+DG AL   AHGGHGCISVTANVAP + A FQNAL+ GDFK AL WQDKLMPLHDALFVETSPGP+KYA SL GLC NELRLP+  V   T + +  AM GLGL
Sbjct:    8 FRGSFTALITPFRDGKVDEQAFQSFVEWQIGQGTHGLVPCGTTGESPTLSHDEHKRVVELCIEAAAGRVPVMAGTGSNSTAEAIDFTVHAKQAGADAALVVTPYYNKPTQQGLYLHFKALAEAVDLPIFIYNIPGRSVIDMKIDTMTRLAELPNIIGVKDATADLARTSLQRAAMGPDFIQLSGEDGTALAHTAHGGHGCISVTANVAPRQCAEFQNALLAGDFKQALAWQDKLMPLHDALFVETSPGPVKYAASLLGLCRNELRLPLSTVLPDTEQRLADAMRGLGL 295          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: A0A812UYP7_SYMMI (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UYP7_SYMMI)

HSP 1 Score: 427 bits (1097), Expect = 3.970e-146
Identity = 208/282 (73.76%), Postives = 237/282 (84.04%), Query Frame = 1
Query:   34 IPALITPFR-NGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDG 876
            +PALITPF  +G VD+ AFQ FVDWQ++QGSHGLVP GTTGESPTL HDEHKRVVE+C+EAAAGRVPV+AGTGSNST EAIDLT HAK AGA GALVV PYYNKPTQ G+Y HYKA+NDA D+PI+IYNIPGR+ V+MTVETMA LA LPNI GVKDA  D+ R +LQR+A G DFIQLSG+DG AL Q AHGG GCISVTAN+AP+EVAAFQNALM GDFKTAL+WQDKLMPLH A+F ETSPGP+KYA SLRG+C + +RLP+V ++      VR  M G
Sbjct:    1 MPALITPFDPSGAVDETAFQSFVDWQVKQGSHGLVPVGTTGESPTLSHDEHKRVVELCVEAAAGRVPVLAGTGSNSTDEAIDLTRHAKEAGADGALVVTPYYNKPTQAGLYAHYKAINDAVDLPIIIYNIPGRSVVDMTVETMASLADLPNIVGVKDATADLDRVTLQRIACGEDFIQLSGEDGTALAQFAHGGVGCISVTANIAPSEVAAFQNALMAGDFKTALEWQDKLMPLHQAMFSETSPGPVKYAASLRGICDDRVRLPLVDISDENRAKVRCIMAG 282          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: A0A2E6QKX4_9PROT (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QKX4_9PROT)

HSP 1 Score: 417 bits (1072), Expect = 2.110e-144
Identity = 208/290 (71.72%), Postives = 238/290 (82.07%), Query Frame = 1
Query:   19 IFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLL 888
            +F GS+ ALITPFR+GK+D++AFQ  VDWQI++GSHGLVP GTTGESPTL H EH+RVVE+CIEAAAGRVPVIAGTGSNSTAEA+ LT HAK+AGA GALVV+PYYNKPT EG YQH+KA+NDA D+P++IYNIPGR+ VN +VETMARLA+LPNI GVKDA  D+TR SL R+ IG DF QLSG+DG  LG  AHGGHGCISVTANVAP   AAF  A M GD   AL   DKLMPLH ALFVETSPGP+KYA +L GLC  ELRLPMV V  +T + VR AM+ +GLL
Sbjct:    1 MFKGSLTALITPFRDGKIDEQAFQSLVDWQIKEGSHGLVPVGTTGESPTLSHVEHRRVVELCIEAAAGRVPVIAGTGSNSTAEAVSLTQHAKQAGADGALVVMPYYNKPTPEGQYQHFKAINDAVDLPVIIYNIPGRSVVNRSVETMARLAELPNIVGVKDATADLTRPSLTRMTIGNDFCQLSGEDGTILGFLAHGGHGCISVTANVAPKLCAAFHEAWMRGDAAGALAIHDKLMPLHHALFVETSPGPVKYAATLLGLCGPELRLPMVEVTDATKQRVRQAMEEVGLL 290          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: A0A2E1CWL0_9PROT (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Kordiimonas sp. TaxID=1970157 RepID=A0A2E1CWL0_9PROT)

HSP 1 Score: 416 bits (1070), Expect = 3.090e-144
Identity = 203/291 (69.76%), Postives = 242/291 (83.16%), Query Frame = 1
Query:   19 IFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARL-AKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLL 888
            +F GSIPALITPF NG+VD   FQ+ V+WQI +GSHGLVPCGTTGESPTLDHDEH++V E+ I+ +AGRVPVIAG GSNST EA+ L  HA +AGA  ALVVVPYYNKPTQEGM+QH+KALNDAAD+PI+IYNIPGR+ V+M+VETMAR   +L N+ GVKDA  D+ R +LQRVA GPDF+QLSG+D  AL   AHGGHGCISVTAN+AP+  AAFQNA M GD++TAL +QD+L  LHDA+FVE SPGP+KYA SL GLCS+E+RLPMVPV+  T KTVR+A++  GLL
Sbjct:    1 MFKGSIPALITPFANGRVDYDGFQKLVNWQIEEGSHGLVPCGTTGESPTLDHDEHRKVTEIAIDVSAGRVPVIAGCGSNSTREAVGLMEHAAKAGADAALVVVPYYNKPTQEGMFQHFKALNDAADLPIIIYNIPGRSIVDMSVETMARCYGELKNVIGVKDATGDVARVALQRVACGPDFLQLSGEDQTALALMAHGGHGCISVTANIAPSLCAAFQNACMEGDYQTALTYQDRLTRLHDAMFVEASPGPVKYAASLLGLCSDEMRLPMVPVSTQTQKTVRSALEDAGLL 291          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: A0A1F2XPJ9_9PROT (4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2XPJ9_9PROT)

HSP 1 Score: 410 bits (1054), Expect = 9.000e-142
Identity = 200/291 (68.73%), Postives = 240/291 (82.47%), Query Frame = 1
Query:   16 PIFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLL 888
            P F GSI ALITPF++GKVD +AFQ+FV+WQI QG+HGLVPCGTTGESPTL HDEH+RVVE+CIEAAAGRVPVIAGTGSNSTAEA++LT HAK AGA G LVV PYYNKPTQEG+Y HYKA+N+  DIPILIYNIPGR+ V+M+V+TMARL KL NI GVKDA  ++ R S QR A+G +F+QLSG+D  ALG  AHGG GCISVTAN+APA  A FQ A + G+F+ ALQ QD+LMPLHDALFVE++PGP+KYA S  GLC+ E RLP+ P+ +++ K V  A+  +GL+
Sbjct:    2 PPFQGSITALITPFKDGKVDARAFQKFVEWQIDQGTHGLVPCGTTGESPTLTHDEHRRVVELCIEAAAGRVPVIAGTGSNSTAEAVELTRHAKAAGADGVLVVTPYYNKPTQEGLYLHYKAINECTDIPILIYNIPGRSVVDMSVDTMARLFKLKNIVGVKDATANMARVSQQRAALGKEFVQLSGEDATALGFMAHGGQGCISVTANIAPALCAEFQLACLAGNFRLALQLQDRLMPLHDALFVESNPGPVKYAASKLGLCNEETRLPLAPLTSASRKKVDEALSAVGLV 292          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: UPI0015D49DE5 (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D49DE5)

HSP 1 Score: 407 bits (1046), Expect = 1.330e-140
Identity = 203/291 (69.76%), Postives = 235/291 (80.76%), Query Frame = 1
Query:   19 IFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLLT 891
            +F GSI ALITPF++GKVD+ AFQ FV+WQ+ +G+HGLVP GTTGESPTL HDEH+RVVE+CIEAA GRVPVIAGTGSNSTAEAI+LT HAK+AGA  ALVV PYYNKPTQEG+YQH+KA++DAAD+PI+IYNIPGR+ V+M+V TMARLAKLPNI GVKDA  D+ R    RV IGPDF QLSG+D  A+   A GG GCISVTANVAP   A  QNA   GDF T  +++D LMPLHDA+FVETSPGP+KYA SL G C  E+RLP+VPV+ ST   VR AM   GLLT
Sbjct:    1 MFHGSIVALITPFKDGKVDEAAFQSFVEWQVSEGTHGLVPVGTTGESPTLSHDEHRRVVELCIEAAGGRVPVIAGTGSNSTAEAIELTQHAKQAGATAALVVTPYYNKPTQEGLYQHFKAIHDAADLPIIIYNIPGRSVVDMSVATMARLAKLPNIVGVKDATADLVRPLRTRVEIGPDFCQLSGEDATAVAFLAQGGVGCISVTANVAPRLCAEMQNAWRKGDFATCERYRDLLMPLHDAMFVETSPGPVKYAASLLGKCGEEVRLPLVPVSDSTRVAVREAMVQTGLLT 291          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: UPI000400EC5C (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI000400EC5C)

HSP 1 Score: 405 bits (1041), Expect = 7.680e-140
Identity = 199/291 (68.38%), Postives = 239/291 (82.13%), Query Frame = 1
Query:   19 IFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLLT 891
            +F GSI AL+TPF+NGKVD+ AFQ FVDWQ+R+G+HGLVPCGTTGESPTL HDEH+RVVE+CIEAA GRVPVIAGTGSNST EAI LT HA+ AGAA ALVV PYYNKPTQEG+YQH+KA++DAA +PI+IYNIPGR+ V+M+V TMARLA+LPNI GVKDA  D+ R    RV IGP+F QLSG+D  A+   A GG GCISV+ANVAP   AA Q+A  +GD KT    +D+LMPLH A+FVETSPGP+KYA SL G C++E+RLP+VPV+ +T +TVR AM  +GLL+
Sbjct:    1 MFHGSIVALLTPFKNGKVDEAAFQSFVDWQVREGTHGLVPCGTTGESPTLSHDEHRRVVELCIEAAGGRVPVIAGTGSNSTEEAIALTRHARAAGAAAALVVTPYYNKPTQEGLYQHFKAIHDAAGLPIIIYNIPGRSVVDMSVATMARLAELPNIVGVKDATADLARPLRTRVEIGPEFCQLSGEDATAIAFNAQGGVGCISVSANVAPGLCAAMQDAWRSGDLKTCFALRDRLMPLHHAMFVETSPGPVKYAASLLGKCTDEVRLPLVPVSDATRQTVREAMVTVGLLS 291          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: UPI001A957166 (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A957166)

HSP 1 Score: 404 bits (1038), Expect = 2.200e-139
Identity = 201/290 (69.31%), Postives = 231/290 (79.66%), Query Frame = 1
Query:   19 IFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLL 888
            +F GSI AL+TPFRNG VD+KAFQ FV+WQI QG+HGLVPCGTTGESPTL HDEH RVV +C+EA AGRVPVIAGTGSNSTAEA+ LT HAK+AGA  ALVV PYYNKPTQEG++QHYKA++DA DIPI+IYNIPGR  V+M+V TMARLAKLPN+ GVKDA  D+TR    R+ IG DF QLSG+D   +   A GGHGCISVTANVAPA+ AA  NA   GD  T  + +D+LMPLH ALFVETSP P+KYA SL GLCS+E+RLPMVPV  +T   VR AM   G+L
Sbjct:    1 MFKGSIVALLTPFRNGAVDEKAFQSFVEWQIAQGTHGLVPCGTTGESPTLSHDEHMRVVALCVEATAGRVPVIAGTGSNSTAEAVALTRHAKQAGADAALVVTPYYNKPTQEGLFQHYKAIHDAVDIPIIIYNIPGRCVVDMSVATMARLAKLPNVVGVKDATADLTRPLRTRLEIGEDFCQLSGEDATVVPFLAQGGHGCISVTANVAPAQCAALHNAWQAGDMTTVARLRDQLMPLHGALFVETSPSPVKYAASLLGLCSDEVRLPMVPVTEATRPIVRDAMVKAGVL 290          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: UPI001106048C (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI001106048C)

HSP 1 Score: 404 bits (1038), Expect = 2.360e-139
Identity = 199/288 (69.10%), Postives = 235/288 (81.60%), Query Frame = 1
Query:   28 GSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAK-LPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLL 888
            GSI ALITPFR+GK D+ AF++FV+WQI QGSHGLVPCGTTGESPTLDHDEH+RV E+CIE AAGRVPVIAG GSNST EA+ L  HA  AGA  ALVV PYYNKPTQEG++QH+KALNDA+DIPI+IYNIP R+ ++M+VETMAR  + L  + GVKDA  ++ R  LQR A+GPDF+QLSG+D  ALG  AHGGHGCISVTAN+APA +A FQ A + G++KTAL  QD+L PLHDA+FVETSPGP+KYA  L GLCS E RLP+VPV  +T KTV+AA+   GLL
Sbjct:    4 GSITALITPFRDGKFDEDAFRKFVNWQIEQGSHGLVPCGTTGESPTLDHDEHRRVTEVCIEVAAGRVPVIAGCGSNSTKEAVGLIRHASEAGADAALVVTPYYNKPTQEGLFQHFKALNDASDIPIIIYNIPPRSVIDMSVETMARCYRELDKVIGVKDATGNVARVPLQRAAMGPDFLQLSGEDQTALGLMAHGGHGCISVTANIAPALLAKFQEACLAGEYKTALGIQDRLTPLHDAMFVETSPGPVKYAAELLGLCSAETRLPIVPVNENTRKTVKAALIKAGLL 291          
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Match: A0A2E5KSU4_9PROT (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KSU4_9PROT)

HSP 1 Score: 402 bits (1033), Expect = 1.270e-138
Identity = 194/290 (66.90%), Postives = 232/290 (80.00%), Query Frame = 1
Query:   19 IFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTTGESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRAGAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTVETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQAAHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFVETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLL 888
            +F GS  ALITPFRNG+VD++AFQ  V+W I++G+HGLVPCGTTGESPTL H+EHKRVVE+CIE AAGRVPVIAG GSNST EAI+LT HAK AGA   L V PYYNKPTQEG++ HYK + DA D+P+ IYNIPGR+ +NM+ +TM RLA+LP + GVKDA  DITR S QR+ +GPDFIQLSG+D  AL   AHGGHGCISVTANVAP   A FQ+A + GDF TAL++QD+LMPLH ALF+ETSP P+KY  SL  LCS+ELRLP+V V+  T ++V+ AM   GLL
Sbjct:    1 MFQGSFVALITPFRNGEVDEQAFQSLVEWHIQEGTHGLVPCGTTGESPTLSHEEHKRVVEICIETAAGRVPVIAGAGSNSTREAIELTEHAKEAGADATLHVTPYYNKPTQEGLFHHYKVIADAVDLPLFIYNIPGRSVINMSNDTMTRLAELPQVVGVKDATADITRVSSQRLLMGPDFIQLSGEDATALALMAHGGHGCISVTANVAPRACAEFQSACLAGDFGTALEYQDRLMPLHTALFLETSPAPVKYGASLLDLCSDELRLPLVEVSDKTKESVKTAMRAAGLL 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12169.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351T4E8_9PROT1.780e-15474.654-hydroxy-tetrahydrodipicolinate synthase n=6 Tax=... [more]
A0A812UYP7_SYMMI3.970e-14673.764-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
A0A2E6QKX4_9PROT2.110e-14471.724-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
A0A2E1CWL0_9PROT3.090e-14469.764-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
A0A1F2XPJ9_9PROT9.000e-14268.734-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=... [more]
UPI0015D49DE51.330e-14069.764-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
UPI000400EC5C7.680e-14068.384-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
UPI001A9571662.200e-13969.314-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
UPI001106048C2.360e-13969.104-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
A0A2E5KSU4_9PROT1.270e-13866.904-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12169contigP-wetherbeei_contig12169:1081..1998 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121033.AUCF01000001_gene1984
Preferred namedapA
PFAMsDHDPS
Model size918
Max annot lvl204441|Rhodospirillales
KEGG rclassRC03062,RC03063
KEGG koko:K01714
KEGG ReactionR10147
KEGG Pathwayko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00525,M00526,M00527
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.26e-140
EggNOG OGsCOG0329@1|root,COG0329@2|Bacteria,1MUCM@1224|Proteobacteria,2TR5W@28211|Alphaproteobacteria,2JPJS@204441|Rhodospirillales
EC4.3.3.7
DescriptionCatalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Cds size918
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185940.0087438-CDS-P-wetherbeei_contig12169:1080..19981683185940.0087438-CDS-P-wetherbeei_contig12169:1080..1998Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12169 1081..1998 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12169.3.1prot_P-wetherbeei_contig12169.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12169 1081..1998 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12169.3.1

>prot_P-wetherbeei_contig12169.3.1 ID=prot_P-wetherbeei_contig12169.3.1|Name=mRNA_P-wetherbeei_contig12169.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=306bp
MPSSRPIFFGSIPALITPFRNGKVDDKAFQEFVDWQIRQGSHGLVPCGTT
GESPTLDHDEHKRVVEMCIEAAAGRVPVIAGTGSNSTAEAIDLTVHAKRA
GAAGALVVVPYYNKPTQEGMYQHYKALNDAADIPILIYNIPGRTGVNMTV
ETMARLAKLPNIAGVKDAANDITRTSLQRVAIGPDFIQLSGDDGNALGQA
AHGGHGCISVTANVAPAEVAAFQNALMTGDFKTALQWQDKLMPLHDALFV
ETSPGPIKYAVSLRGLCSNELRLPMVPVAASTGKTVRAAMDGLGLLTRPQ
AVSGA*
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mRNA from alignment at P-wetherbeei_contig12169:1081..1998-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12169.3.1 ID=mRNA_P-wetherbeei_contig12169.3.1|Name=mRNA_P-wetherbeei_contig12169.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=918bp|location=Sequence derived from alignment at P-wetherbeei_contig12169:1081..1998- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCTCATCCAGGCCTATATTTTTTGGCTCAATCCCGGCCCTTATCAC CCCGTTTCGCAACGGCAAGGTGGACGATAAGGCGTTTCAGGAGTTTGTGG ACTGGCAGATCAGGCAGGGATCGCACGGCCTGGTGCCCTGCGGCACGACG GGCGAATCGCCGACACTGGATCATGACGAACATAAACGTGTTGTGGAAAT GTGTATTGAGGCGGCAGCGGGGCGTGTGCCGGTGATCGCCGGCACAGGTT CCAATTCCACTGCCGAAGCCATTGATTTGACAGTGCATGCCAAACGGGCA GGGGCGGCGGGCGCGCTGGTGGTTGTTCCCTATTACAACAAGCCAACCCA GGAAGGCATGTATCAGCATTACAAGGCGCTGAACGATGCGGCGGATATTC CGATCCTGATTTACAACATACCGGGCCGCACCGGGGTCAATATGACCGTT GAGACCATGGCGCGGCTGGCCAAACTGCCAAATATTGCCGGGGTGAAAGA CGCTGCGAATGATATTACGCGCACCAGTTTGCAGCGCGTGGCAATTGGGC CCGATTTTATCCAGCTTTCCGGTGATGACGGAAATGCGCTGGGCCAGGCG GCGCATGGCGGGCATGGCTGCATTTCTGTGACCGCCAATGTGGCGCCTGC GGAAGTTGCGGCGTTTCAGAATGCCTTGATGACAGGGGATTTCAAAACCG CATTGCAGTGGCAGGATAAATTGATGCCGCTGCATGATGCGCTGTTTGTG GAGACCAGTCCCGGGCCAATTAAATATGCCGTCAGCCTGCGGGGACTGTG CAGCAATGAGTTGCGCCTGCCGATGGTTCCGGTTGCGGCGTCGACCGGGA AAACCGTACGCGCGGCGATGGACGGACTTGGGCTGCTTACCCGTCCGCAA GCTGTCAGCGGCGCTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12169:1081..1998-

>mRNA_P-wetherbeei_contig12169.3.1 ID=mRNA_P-wetherbeei_contig12169.3.1|Name=mRNA_P-wetherbeei_contig12169.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=918bp|location=Sequence derived from alignment at P-wetherbeei_contig12169:1081..1998- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCTCATCCAGGCCTATATTTTTTGGCTCAATCCCGGCCCTTATCAC
CCCGTTTCGCAACGGCAAGGTGGACGATAAGGCGTTTCAGGAGTTTGTGG
ACTGGCAGATCAGGCAGGGATCGCACGGCCTGGTGCCCTGCGGCACGACG
GGCGAATCGCCGACACTGGATCATGACGAACATAAACGTGTTGTGGAAAT
GTGTATTGAGGCGGCAGCGGGGCGTGTGCCGGTGATCGCCGGCACAGGTT
CCAATTCCACTGCCGAAGCCATTGATTTGACAGTGCATGCCAAACGGGCA
GGGGCGGCGGGCGCGCTGGTGGTTGTTCCCTATTACAACAAGCCAACCCA
GGAAGGCATGTATCAGCATTACAAGGCGCTGAACGATGCGGCGGATATTC
CGATCCTGATTTACAACATACCGGGCCGCACCGGGGTCAATATGACCGTT
GAGACCATGGCGCGGCTGGCCAAACTGCCAAATATTGCCGGGGTGAAAGA
CGCTGCGAATGATATTACGCGCACCAGTTTGCAGCGCGTGGCAATTGGGC
CCGATTTTATCCAGCTTTCCGGTGATGACGGAAATGCGCTGGGCCAGGCG
GCGCATGGCGGGCATGGCTGCATTTCTGTGACCGCCAATGTGGCGCCTGC
GGAAGTTGCGGCGTTTCAGAATGCCTTGATGACAGGGGATTTCAAAACCG
CATTGCAGTGGCAGGATAAATTGATGCCGCTGCATGATGCGCTGTTTGTG
GAGACCAGTCCCGGGCCAATTAAATATGCCGTCAGCCTGCGGGGACTGTG
CAGCAATGAGTTGCGCCTGCCGATGGTTCCGGTTGCGGCGTCGACCGGGA
AAACCGTACGCGCGGCGATGGACGGACTTGGGCTGCTTACCCGTCCGCAA
GCTGTCAGCGGCGCTTGA
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