mRNA_P-wetherbeei_contig12166.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: D8LRD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD9_ECTSI) HSP 1 Score: 127 bits (319), Expect = 1.280e-31 Identity = 59/124 (47.58%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 1 PCPAGTSSWRYGLRAAAECWPCAPGFFCPEA-----SIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVGGSNDGTTRTAQVRCERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFAC 357
PCPAGT W+YG + C PC G++CP S +A CG+ V+CP G+ P+PV AGFY+VGG ++GTTR +QV CE GY+C R C G +GSS GL C+G CP G AC
Sbjct: 835 PCPAGTFQWKYGESSRGSCLPCKAGYYCPPGESASPSRDATLVACGNPTVFCPEGSVEPVPVRAGFYSVGGGSEGTTRVSQVLCEAGYYCQDAARKLCPAGTYGSSAGLRDEGCTGVCPPGAAC 958
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: A0A835Z6D3_9STRA (TNFR-Cys domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D3_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.590e-30 Identity = 64/143 (44.76%), Postives = 81/143 (56.64%), Query Frame = 1
Query: 4 CPAGTSSWRYGLRAAAECWPCAPGFFCPE----ASIEARKHPCGHAAVYCPGGTALPLPVM---------------AGFYTVG----GSNDG-TTRTAQVRCERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFACP 360
CP GT WRYG ++C PC G+FCP +++ CG VYCP G++ PLPV G+Y+ G G +DG TR+AQ RCE GY+C GGIR C G +G++TGL TP CSG+CPAG ACP
Sbjct: 363 CPPGTYQWRYGAHDVSDCAPCPAGYFCPSYPAPPTVDPAPFECGGPDVYCPEGSSEPLPVKRRAVSQVPEMLHGCGVGYYSTGVAREGLDDGGATRSAQARCEPGYYCRGGIRTECPAGTYGATTGLNTPRCSGWCPAGHACP 505
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: A0A482SCJ5_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCJ5_9ARCH) HSP 1 Score: 112 bits (280), Expect = 1.400e-28 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 1 PCPAGTSSWRYGLRAAAECWPCAPGFFCPEASIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVGGSNDGTTRTAQVR-----CERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFACPGAT 369
PCPAG R GL ++ CA G+FC E ++ PCG+++VYCP G+A PLPV G+Y++ + + + +R C GY+C G++ C GRFG + GL +P+CSG CP GF+CP A+
Sbjct: 64 PCPAGFYGDRPGLNSSMCSGQCAAGYFCLEGTVHYSSRPCGNSSVYCPTGSAKPLPVPPGYYSIDINGEDVVTSISLRSSIAICPVGYYCQQGVKSACPGGRFGVTLGLISPNCSGICPGGFSCPPAS 191
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: H3HDW3_PHYRM (Cellulose synthase 3 n=2 Tax=Peronosporaceae TaxID=4777 RepID=H3HDW3_PHYRM) HSP 1 Score: 113 bits (283), Expect = 9.520e-27 Identity = 60/136 (44.12%), Postives = 74/136 (54.41%), Query Frame = 1
Query: 4 CPAGTSSWRYGLRAAAECWPCAPGFFCPEASIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVGGSN-----------------DGTTRTAQVRCERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFACP 360
CPAGT GL +AA C G++CP S + PCG V+CP G+ALP+ V +G+YTVG D TTR AQ RCE G++C G R+ C G FG+ GLTT DCSG C AG+ CP
Sbjct: 1242 CPAGTFGSVSGLASAACSGLCTAGYYCPRGSTSDTQLPCGSVNVFCPPGSALPVQVASGYYTVGDQKATKDSLTEDALAAERDKDRTTRVAQRRCEPGHYCVDGERHACPAGTFGNKAGLTTTDCSGLCAAGYYCP 1377
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: K3WNJ6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNJ6_GLOUD) HSP 1 Score: 107 bits (268), Expect = 9.700e-25 Identity = 56/129 (43.41%), Postives = 70/129 (54.26%), Query Frame = 1
Query: 4 CPAGTSSWRYGLRAAAECWPCAPGFFCPEASIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVGGS----------NDGTTRTAQVRCERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFACP 360
CP GT GL CA G++C S AR+ CG VYCP G+A P+PV G YT+G + D TTR AQ+RCE G++C G+R+PC G +G + GLTT CSG C G CP
Sbjct: 284 CPGGTYGDVEGLTTPLCAGACAEGYYCERGSTRARQTECGGPHVYCPRGSATPVPVSPGHYTIGATLSRPHEDQDYADATTRIAQMRCEPGHYCIEGVRFPCPGGTYGDAFGLTTAACSGQCVEGHYCP 412
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: A0A5D6XLS4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLS4_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.780e-24 Identity = 60/132 (45.45%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 4 CPAGTSSWRYGLRAAAECWPCAPGFFCPE----ASIEARKHPCGHAAVYCPGGTA-LPLPVMAGFYTVG---GSNDG--TTRTAQVRCERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFACPGAT 369
CP GT GLR A CA G++CP S+ A + CG + VYCP GT P+ V GFYTVG GS D TTRT Q C +G++C G+ C G +G GL+ P C+G+CPAG+ACP AT
Sbjct: 705 CPEGTFGATSGLRDATCSGLCAAGYYCPSYPRLPSVRATQLECGSSTVYCPVGTGNRPMAVRRGFYTVGAGDGSGDAKNTTRTGQTVCPKGFYCRRGVMIRCPDGTYGDDEGLSDPYCTGWCPAGYACPTAT 836
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: A0A485KQA2_9STRA (Aste57867_10202 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQA2_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.180e-22 Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 4 CPAGTSSWRYGLRAAAECWPCAPGFFCPEASIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVGGSNDGTTRTAQVRCERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFACP 360
CPAGT L ++ C G+FCP S HPC +A YCP G++ P V AG+ TV + DG R Q++C G +C G+ + C G +GS+TGLTTP CSG C G CP
Sbjct: 332 CPAGTYGMTPALSSSTCTANCPAGYFCPIGSATYANHPCLNATTYCPAGSSSPTGVSAGYSTVL-ATDGRLRMDQIQCPTGSYCTHGVAHSCPRGTYGSTTGLTTPACSGPCAPGHICP 449
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: A0A7S1UIY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIY9_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 8.830e-22 Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 64 CAPGFFCPEASIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVG---------GSNDGTTRTAQVRCERGYFCDGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFACP 360
C G++CP S+ + CG +CP G+ P PV G+YT+G D R AQ+ CE G+FC GG++Y C PG +G + GL T +CSG C GF CP
Sbjct: 587 CEAGWYCPVGSVNKTQEVCGGPGFFCPAGSGTPTPVSTGYYTIGRYSLAGELQSDRDEKIRDAQLPCEPGFFCFGGVKYACPPGTYGLTYGLATVECSGLCTPGFYCP 694
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: A0A835YKX8_9STRA (INTRADIOL_DIOXYGENAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.280e-21 Identity = 54/124 (43.55%), Postives = 70/124 (56.45%), Query Frame = 1
Query: 1 PCPAGTSSWRYGLRA----AAECWPCAPGFFCPEASIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVGGSNDGTTRTAQVRCERGYFCDG-GIRYPCAPGRFGSSTGLTTPDCSGFCPAGFAC 357
PCPAG GL + A+ C G+FCP S A++ CG VYCP G+A PLPV AG+++ GG+ + TRT + C G++C G G C G +G+ TGLTT CSG CP G C
Sbjct: 936 PCPAGFPGTGPGLTSPQCSASGASACVAGYFCPRGSHSAKQEECGGDGVYCPAGSAAPLPVGAGWHSTGGTAN--TRTGREICPVGHYCTGNGSARTCPAGVYGADTGLTTAACSGACPPGLFC 1057
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Match: A0A7S3M821_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M821_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.300e-20 Identity = 59/138 (42.75%), Postives = 74/138 (53.62%), Query Frame = 1
Query: 4 CPAGTSSWRYGLRAA---AECWP-CAPGFFCPEASIEARKHPCGHAAVYCPGGTALPLPVMAGFYTVGGSN----------DG-----TTRTAQVRCERGYFC-DGGIRYPCAPGRFGSSTGLTTPDCSGFCPAGFAC 357
CPAG RYGL A C C GF+CPE SI ++ C AA YCP + P+ V G+YTVG DG T RT Q CE+GY+C GI+ C GR+GS+ GL++P CSG+C AG+ C
Sbjct: 22 CPAG----RYGLHLRVFNASCTGVCTAGFYCPEGSIIDKQVRCPDAASYCPTASPAPVLVSPGYYTVGHETSNYTYDIINYDGNAFAETARTGQAICEKGYYCLSDGIKRKCPVGRYGSTRGLSSPSCSGYCAAGYYC 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12166.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12166.1.1 >prot_P-wetherbeei_contig12166.1.1 ID=prot_P-wetherbeei_contig12166.1.1|Name=mRNA_P-wetherbeei_contig12166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp PCPAGTSSWRYGLRAAAECWPCAPGFFCPEASIEARKHPCGHAAVYCPGGback to top mRNA from alignment at P-wetherbeei_contig12166:1351..1957- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12166.1.1 ID=mRNA_P-wetherbeei_contig12166.1.1|Name=mRNA_P-wetherbeei_contig12166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=607bp|location=Sequence derived from alignment at P-wetherbeei_contig12166:1351..1957- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12166:1351..1957- >mRNA_P-wetherbeei_contig12166.1.1 ID=mRNA_P-wetherbeei_contig12166.1.1|Name=mRNA_P-wetherbeei_contig12166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig12166:1351..1957- (Phaeothamnion wetherbeei SAG_119_79)back to top |