mRNA_P-wetherbeei_contig12155.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A2W2AUG7_9HYPH (Cupin_7 domain-containing protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AUG7_9HYPH) HSP 1 Score: 234 bits (598), Expect = 4.170e-73 Identity = 123/239 (51.46%), Postives = 163/239 (68.20%), Query Frame = 3 Query: 249 SWHREVPHAPGLQAHAQVIGGGELTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLDDARAAKPAVV--KSDMPAPLQRLLGGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 +W+RE+ HAP L A A G L HHLDD+T+L+YAAGTL EA SV AA H+++C CR AVR AEALGGE+L+ + AVS+ R+ T A+L+ A + V + P L RLL ++ W+KKAPGVA++++ L AKG LKLL I +G M EHGHGGEE+T+VL+GA+ D +GRFA GD+ADLDED EH P+++ CICL ATE P+ +K+F RL+QPF+ I Sbjct: 7 AWNREIAHAPSLWAPAPHTGDRTLKPNHHLDDSTLLAYAAGTLDEAFSVVAASHVAICPACREAVRAAEALGGELLEVAGSAAVSEDCRSRTFAALEQAGLYRLPVAQPRPAFPRALARLLPVASLDEIAWKKKAPGVAIFDVKLPASAKGQLKLLRIGAGRAMPEHGHGGEEITMVLKGAYVDHMGRFAAGDVADLDEDIEHRPVVDDSGECICLVATERPTRFKSFAARLMQPFVGI 245
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A847ZUS2_9HYPH (Transcriptional regulator n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZUS2_9HYPH) HSP 1 Score: 223 bits (569), Expect = 4.020e-69 Identity = 112/217 (51.61%), Postives = 154/217 (70.97%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLDDARAAKPAVVK---SDMPAPLQRLLGGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 + I HHLDDAT++++AAGTLGEA V + H++MC CR AVR AEA+GG + + + AVSD RAATLASLD A V+ SD+P PL LLGG+ A L+W+ +APGVA +++ +S G++ L+L+ + SG M +HGHGGEELTL+L+G++ D GR+ GD+ADLDE+TEH P+++ E CICL ATEAP+ +K+ RL QPF+ I Sbjct: 1 MKISHHLDDATVVAFAAGTLGEAHRVVVSAHVTMCRVCRDAVRAAEAVGGMVFQEQDGDAVSDGCRAATLASLDGAAQTMAVKVRGPLSDVPLPLGNLLGGKSLADLKWKVRAPGVAKFDIEMSPGSRTRLQLMRLGSGRKMPDHGHGGEELTLILKGSYSDHTGRYLPGDVADLDEETEHQPMVDSDEDCICLIATEAPTRFKSIWARLAQPFVGI 217
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A2R4MCN7_9HYPH (Anti-sigma-E factor ChrR n=1 Tax=Maritalea myrionectae TaxID=454601 RepID=A0A2R4MCN7_9HYPH) HSP 1 Score: 200 bits (508), Expect = 6.900e-60 Identity = 105/221 (47.51%), Postives = 142/221 (64.25%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLD-------DARAAKPAVVKSDMPAPLQRLLGGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 +T HHLDDAT+L YA+G L A ++ A H++MC +CR A R AE +GG M+D + VSD +A LD + K + SD+P PL+ L+G +RWR APGV YE+ K + SL +L+I+ GM + EHGHGG E+TL+L GA++DK+G F GD+ADLDED EH PI+E GE CICL ATEAP+ +K + RL+QPF++I Sbjct: 1 MTTQHHLDDATLLRYASGDLDSAFTMVVAAHLAMCDKCRKAARDAEEIGGHMMDHVAQAPVSDDAFERMMARLDSGADEQIEVDLPKKSAPDSDVPLPLRALIGDH-MDDVRWRLVAPGVRKYEIQQGKKGESSLYMLNISPGMAVPEHGHGGAEMTLILSGAYRDKLGVFGPGDVADLDEDIEHQPIVEPGEACICLVATEAPTRFKDLIVRLMQPFVRI 220
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A8J7F6T4_9GAMM (Cupin domain-containing protein n=1 Tax=Pontibacterium sp. N1Y112 TaxID=2781979 RepID=A0A8J7F6T4_9GAMM) HSP 1 Score: 200 bits (508), Expect = 7.120e-60 Identity = 105/220 (47.73%), Postives = 149/220 (67.73%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLD------DARAAKPAV----VKSDMPAPLQRLLGGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQP 947 ++I HHLD+AT+LSYAAG++ +A+++ ACH+ MC++CRT +++EA+GG +LD L +V+D A+ LA++D R+ KP VKSD+PAPL +G + F + W++ PGV ++LP G G +LL IA G ML H H G ELTLVL+G+F D++GRFA GDIADLD+ EH P+++ E CICL AT+AP + T LGRL+QP Sbjct: 1 MSIRHHLDEATLLSYAAGSMSQAMALVTACHLVMCSQCRTRAQQSEAIGGALLDSLIPASVNDDALASVLAAIDAQDETVQIRSVKPPSQRPSVKSDVPAPLADYIG-ESFDDVEWKRIVPGVYYFDLPCQSG--GVSRLLRIAPGKAMLPHSHDGNELTLVLRGSFTDEIGRFAAGDIADLDDQIEHQPLVDSAEDCICLVATDAPLKFTTLLGRLVQP 217
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A1E3VJF7_9HYPH (Cupin_7 domain-containing protein n=2 Tax=Methyloceanibacter TaxID=1484898 RepID=A0A1E3VJF7_9HYPH) HSP 1 Score: 197 bits (500), Expect = 1.100e-58 Identity = 109/222 (49.10%), Postives = 147/222 (66.22%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLDDARAA-------KPAVVKSDMPAPLQRLL-GGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 +TIVHH D AT++SYAAG+L E + A HI+ C CR A+R+ E +GG +L+ +EA+ +S A L+ LDD A +P + +P PL RLL GG D + W+K APGV+ + LP+SK A+ +L LL IA G + +HGHGG ELTLVL+G+++D GRF GDIADLDE EH P+++ E CICL ATEAP+ +K+F GRLLQP + I Sbjct: 1 MTIVHHPDTATLVSYAAGSLDEGFATLVAAHIATCDACRAALREIEDVGGAVLESVEASPMSPASLDRALSLLDDHADAPAERTKPRPKDTRPGVPGPLARLLKGGLD--DIVWKKVAPGVSKHVLPVSKTARSTLTLLRIAPGTKIPDHGHGGMELTLVLEGSYRDVFGRFGPGDIADLDEHAEHQPVVDSPEACICLVATEAPTRFKSFFGRLLQPIVGI 220
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A4R3M873_9HYPH (ChrR-like anti-ECFsigma factor n=1 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3M873_9HYPH) HSP 1 Score: 195 bits (495), Expect = 5.840e-58 Identity = 112/221 (50.68%), Postives = 146/221 (66.06%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLE-ATAVSDA-----RRAATLASLDDARAAKPAVVKSDMPAPLQRLL-GGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 + I HH D+AT+L+YAAG+L EALSV A H++MCA CR AVR AEA+GG L++ E A +D+ R T A+L KP V +P PL R + GG D ++RWR APGV +E+ +S G L LL IASG M EHGH G ELTLVL G++ D GR+ GD+ADLDED EH P+++ E CICL ATEAP+ +K+ +GRLLQP+L++ Sbjct: 1 MNIRHHPDEATLLAYAAGSLTEALSVTVAAHLAMCAHCRAAVRTAEAIGGASLENAEIAPLAADSLAHMMARIETPAALRPEPRPKPRVTDPRVPMPLARRIDGGLD--EIRWRWIAPGVRSHEISVSPSG-GRLVLLRIASGKAMPEHGHRGSELTLVLAGSYSDATGRYGPGDLADLDEDLEHTPVVDSEEDCICLVATEAPTRFKSLIGRLLQPYLRL 218
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: UPI000D3E7C62 (ChrR family anti-sigma-E factor n=1 Tax=Methyloceanibacter sp. wino2 TaxID=2170729 RepID=UPI000D3E7C62) HSP 1 Score: 192 bits (488), Expect = 7.010e-57 Identity = 109/223 (48.88%), Postives = 143/223 (64.13%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLDDARAAKPAVVKS-------DMPAPLQRLL--GGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 +TIVHH D AT++SYAAG+L E + A HI+ C CR A+R+ E +GG +L+ +EA+ +S A L+ LDD A PA K +P PL RLL G D W+K APGV+ + LP+SK A+ +L LL IA G + +HGHGG ELTLVL+G+++D GRF GDIADLDE EH P+++ E CICL ATEAP+ +K F RLLQP + I Sbjct: 1 MTIVHHPDTATLVSYAAGSLDEGFATLVAAHIATCDACRAALREIEDVGGAVLESVEASPMSPASLDRALSLLDDHADAPPARTKPRPKDTRPGVPGPLARLLECGLDDIV---WKKVAPGVSKHVLPVSKTARSTLTLLRIAPGTKIPDHGHGGMELTLVLEGSYRDVFGRFGPGDIADLDEHAEHQPVVDSPEACICLVATEAPTRFKGFFSRLLQPIVGI 220
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: UPI001F40479E (ChrR family anti-sigma-E factor n=1 Tax=Maritalea sp. P4.10X TaxID=2909667 RepID=UPI001F40479E) HSP 1 Score: 192 bits (488), Expect = 7.010e-57 Identity = 99/221 (44.80%), Postives = 140/221 (63.35%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLD-------DARAAKPAVVKSDMPAPLQRLLGGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 + I HHLD+AT+L YA+G L A ++ A H++MC CR A R AE +GG M+D + VS +A +D + ++ SD+P PL+ L+G +RWR APGV +E+ + K + SL +L+I+ GM M EHGHGG E+TL+L GA++DK+G F GD+ADLDE EH P++E GE CICL ATE P+ +K F+ RL+QPF++I Sbjct: 1 MNIHHHLDEATLLRYASGDLDSAFTMVVAAHLAMCDSCRQAARDAEEIGGHMMDRVAQAPVSSNAFEKMMARIDAGQDEQIEVDVSRHKKADSDVPLPLRNLIGDH-LDDVRWRLVAPGVRKHEIKMGKKGESSLYMLNISPGMAMPEHGHGGAEMTLILSGAYRDKLGVFGPGDVADLDEHIEHQPVVEPGEACICLVATETPTRFKDFIVRLMQPFVRI 220
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A4R6VSL2_9HYPH (ChrR-like anti-ECFsigma factor n=1 Tax=Maritalea mobilis TaxID=483324 RepID=A0A4R6VSL2_9HYPH) HSP 1 Score: 191 bits (485), Expect = 1.980e-56 Identity = 99/217 (45.62%), Postives = 139/217 (64.06%), Query Frame = 3 Query: 330 HHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLD-------DARAAKPAVVKSDMPAPLQRLLGGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 HHLD+AT+L YA+G L A ++ A H++MC ECR AVR AE +GG M+D ++ V+ +A LD + K A SD+P PL+ L+G + + WR APGV +E+ + K + L +L+I+ GM + EHGHGG E+TL+L GA++DK+G F GD+ADLDE EH PI+E GE CICL ATE P+ +K + RL+QPF++I Sbjct: 5 HHLDEATLLRYASGDLDSAFTIVVAAHLAMCDECRQAVRDAEEIGGHMMDHVDEAPVASDAFEKLMARLDTGENEQIEVDLRKNAQSDSDVPLPLRELIG-EHLDDVSWRLVAPGVRKHEIRMGKKGESFLYMLNISPGMAVPEHGHGGAEMTLILSGAYRDKLGVFGPGDVADLDEHIEHQPIVEPGEACICLVATETPTRFKDLISRLMQPFVRI 220
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Match: A0A2T5US64_9HYPH (ChrR-like anti-ECFsigma factor n=1 Tax=Breoghania corrubedonensis TaxID=665038 RepID=A0A2T5US64_9HYPH) HSP 1 Score: 190 bits (483), Expect = 4.340e-56 Identity = 99/224 (44.20%), Postives = 141/224 (62.95%), Query Frame = 3 Query: 318 LTIVHHLDDATILSYAAGTLGEALSVAAACHISMCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLDDARAAKPAVV----------KSDMPAPLQRLLGGQDFAQLRWRKKAPGVAVYELPLSKGAKGSLKLLSIASGMTMLEHGHGGEELTLVLQGAFKDKVGRFARGDIADLDEDTEHCPIIEKGETCICLYATEAPSHYKTFLGRLLQPFLKI 959 +TI+HHLD T+L YA+G L EA SV A H++MC ECR +R AE +GG +L++ E VSD + + +D+A A+ ++ K D+P+ LQR +G + A + W+ APGV +++ LS + +L +L I G + EHGHGG E+TL+L GA++D +GRF GD+ADLDE EH P +E GE C+CL ATEAP+ +K RLLQP + I Sbjct: 1 MTILHHLDQTTLLRYASGDLDEAFSVVVAAHLAMCDECRRELRIAEDIGGRLLEESEMATVSDGAFSRIMCRIDEAEASGETILAAPPIALRGGKQDVPSTLQRYIGTR-LADISWKTVAPGVRRHKIALSTPTRSALYMLKIEPGKAVPEHGHGGTEMTLILSGAYRDALGRFGPGDLADLDEHVEHQPRVEPGEPCVCLVATEAPTRFKGIFSRLLQPLVGI 223 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12155.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12155.2.1 >prot_P-wetherbeei_contig12155.2.1 ID=prot_P-wetherbeei_contig12155.2.1|Name=mRNA_P-wetherbeei_contig12155.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp MCAECRTAVRKAEALGGEMLDDLEATAVSDARRAATLASLDDARAAKPAVback to top mRNA from alignment at P-wetherbeei_contig12155:1075..2036- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12155.2.1 ID=mRNA_P-wetherbeei_contig12155.2.1|Name=mRNA_P-wetherbeei_contig12155.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=962bp|location=Sequence derived from alignment at P-wetherbeei_contig12155:1075..2036- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12155:1075..2036- >mRNA_P-wetherbeei_contig12155.2.1 ID=mRNA_P-wetherbeei_contig12155.2.1|Name=mRNA_P-wetherbeei_contig12155.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig12155:1075..2036- (Phaeothamnion wetherbeei SAG_119_79)back to top |