mRNA_P-wetherbeei_contig1215.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: D7FKR1_ECTSI (GTP 3',8-cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR1_ECTSI) HSP 1 Score: 265 bits (677), Expect = 7.520e-85 Identity = 133/224 (59.38%), Postives = 161/224 (71.88%), Query Frame = 1 Query: 1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRWE 672 SML D GR HNYLRISLTERCNLRCVYCMPEDGV LQP ++++ +EI R+ +MF AGVDK+RLTGGEPL+RKDLPDIV A+ + VRNVG+TTNG+ L+R++P L++AGLTHINVS+DTL P +F+ ITRR GL L +++AALA GYG RLK+NCVVM GVN +EL DFL +DVRFIEWMPFDDNRW+ Sbjct: 39 SMLSDTHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQSKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLEGVRNVGVTTNGINLKRKIPALREAGLTHINVSLDTLQPDRFAAITRRK--GLDTVLASLDAALAHGYGG----------------------RLKINCVVMNGVNTDELADFLEFTRDQEIDVRFIEWMPFDDNRWK 238
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A835ZCI4_9STRA (GTP 3',8-cyclase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI4_9STRA) HSP 1 Score: 254 bits (649), Expect = 9.510e-80 Identity = 131/223 (58.74%), Postives = 160/223 (71.75%), Query Frame = 1 Query: 1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 SML D GRFHNYLRISLTERCNLRC YCMPEDGV LQP LL+++EIARV +F +GVDKVRLTGGEPLLR+DL D+VG I A VR++G+TTNG++L++R+ L AGL+H+NVS+DTL +F+ ITRR GL + L I+AAL AG+G RLK+NCVVMGGVN++EL F+ LG + +DVRFIEWMPFDDNRW Sbjct: 109 SMLVDTHGRFHNYLRISLTERCNLRCTYCMPEDGVSLQPQSHLLTTDEIARVAQLFVRSGVDKVRLTGGEPLLRRDLADVVGRISAL-GVRHIGVTTNGLVLKQRVQALAAAGLSHVNVSLDTLQEQRFNAITRRR--GLEQVLAGIDAALDAGFGG----------------------RLKINCVVMGGVNEDELAAFVELGSSRPLDVRFIEWMPFDDNRW 306
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: UPI0018856050 (LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein 1-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018856050) HSP 1 Score: 234 bits (598), Expect = 3.110e-73 Identity = 123/223 (55.16%), Postives = 151/223 (67.71%), Query Frame = 1 Query: 1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 + L D FGRFH+YLRISL+ERCNLRC YCMPE+GVPL P LL++EE+ R+ +FAAAGV KVRLTGGEPL+R DL D++ ++A P ++ V +TTN ++L RRL LQ AGL IN+ +DTL PAKF ITRR G R +I+ ALAAGY +K+NCVVM GVNDEEL DF+ L ET +DVRFIE+MPFD NRW Sbjct: 61 NFLTDSFGRFHDYLRISLSERCNLRCQYCMPEEGVPLTPKSHLLTAEEVVRLAGLFAAAGVTKVRLTGGEPLVRADLADVIAGLKAIPGIQWVAMTTNAVVLHRRLAALQAAGLDAINIXLDTLVPAKFELITRRR--GFHRVWQSIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFVALTETFRLDVRFIEYMPFDGNRW 258
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A6A4W5R5_AMPAM (GTP 3',8-cyclase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W5R5_AMPAM) HSP 1 Score: 234 bits (596), Expect = 3.350e-72 Identity = 123/221 (55.66%), Postives = 148/221 (66.97%), Query Frame = 1 Query: 7 LRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 L D FGRFH+YLRISLTERCNLRC YCMPEDGVPL LL+++E+ R+ +F+AAGV KVRLTGGEPL+R DL DI+ ++ +R+V ITTNG++L RRL LQ AGL +N+S+DTL PAKF I+RR G R I+ ALAAGY +K+NCVVM GVNDEEL DF L ET +DVRFIE+MPFD NRW Sbjct: 80 LTDSFGRFHDYLRISLTERCNLRCTYCMPEDGVPLTERSHLLTTDEVIRLAGLFSAAGVTKVRLTGGEPLVRADLADIIAGLKTVAGIRSVAITTNGVVLARRLAALQAAGLDALNISLDTLVPAKFELISRRR--GFHRVWQGIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFATLAETYRLDVRFIEYMPFDGNRW 275
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: UPI001884A5D0 (molybdenum cofactor biosynthesis protein 1-like n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884A5D0) HSP 1 Score: 236 bits (603), Expect = 3.200e-70 Identity = 124/223 (55.61%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 + L D FGRFH+YLRISL+ERCNLRC YCMPE+GVPL P LL++EE+ R+ +FAAAGV KVRLTGGEPL+R DL D++ ++A P ++ V +TTN ++L RRL LQ AGL IN+S+DTL PAKF ITRR G R +I+ ALAAGY +K+NCVVM GVNDEEL DF+ L ET +DVRFIE+MPFD NRW Sbjct: 61 NFLTDSFGRFHDYLRISLSERCNLRCQYCMPEEGVPLTPKSHLLTAEEVVRLAGLFAAAGVTKVRLTGGEPLVRADLADVIAGLKAIPGIQWVAMTTNAVVLHRRLAALQAAGLDAINISLDTLVPAKFELITRRR--GFHRVWQSIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFVALTETFRLDVRFIEYMPFDGNRW 258
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A087SAI5_AUXPR (GTP 3',8-cyclase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SAI5_AUXPR) HSP 1 Score: 226 bits (575), Expect = 5.240e-70 Identity = 117/222 (52.70%), Postives = 150/222 (67.57%), Query Frame = 1 Query: 4 MLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 ML D FGR H+YLRISLTERCNLRC+YCMP++GV L PA LLSSEEI R+ +F +AGVDK+RLTGGEP LRKDL +V ++ A P + ++GITTNG+ L R+L L+ AGLTH+N+S+DTL P +F +TRR G R L +I+ A+A GY +KVN VVM GVND+E+ DF+ + A ++VRFIE+MPFD N W Sbjct: 1 MLTDSFGRVHSYLRISLTERCNLRCLYCMPDEGVELTPALHLLSSEEILRLARLFVSAGVDKIRLTGGEPTLRKDLVRLVASLSALPGLASIGITTNGLTLGRQLAALRSAGLTHLNISLDTLRPDRFVTLTRRQ--GHARVLASIQEAIAQGYDP-----------------------VKVNVVVMRGVNDDEIADFVEMTRHAPINVRFIEYMPFDGNVW 197
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: UPI001C924BB0 (molybdenum cofactor biosynthesis protein 1-like isoform X1 n=7 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C924BB0) HSP 1 Score: 234 bits (596), Expect = 1.270e-69 Identity = 123/221 (55.66%), Postives = 148/221 (66.97%), Query Frame = 1 Query: 7 LRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 L D FGRFH+YLRISLTERCNLRC YCMPEDGVPL LL+++E+ R+ +F+AAGV KVRLTGGEPL+R DL DI+ ++ +R+V ITTNG++L RRL LQ AGL +N+S+DTL PAKF I+RR G R I+ ALAAGY +K+NCVVM GVNDEEL DF L ET +DVRFIE+MPFD NRW Sbjct: 80 LTDSFGRFHDYLRISLTERCNLRCTYCMPEDGVPLTERSHLLTTDEVIRLAGLFSAAGVTKVRLTGGEPLVRADLADIIAGLKTVAGIRSVAITTNGVVLARRLAALQAAGLDALNISLDTLVPAKFELISRRR--GFHRVWQGIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFATLAETYRLDVRFIEYMPFDGNRW 275
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A329RR81_9STRA (GTP 3',8-cyclase n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RR81_9STRA) HSP 1 Score: 226 bits (577), Expect = 2.880e-69 Identity = 119/223 (53.36%), Postives = 147/223 (65.92%), Query Frame = 1 Query: 1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 S L D FGR H YLRISLTERCNLRC YCMPEDGVPLQP E LL++ EI R+ +FA++GV ++RLTGGEPLLR+DL ++V IRA P + +VGITTNG+ L+++L LQQAG+ +NVS+DTL P KF+ ITRR G R + +I A G+ LK+NCVV N +E+ DF+ E AVDVRFIEWMPFD NRW Sbjct: 82 SQLLDRFGRAHTYLRISLTERCNLRCRYCMPEDGVPLQPTEELLTTSEITRLAKVFASSGVKRIRLTGGEPLLRRDLVELVAQIRAIPGIESVGITTNGITLQKKLLALQQAGVDRLNVSLDTLKPDKFAHITRRQ--GFTRVMNSILEAQTLGFSP-----------------------LKINCVVQRRFNLDEVVDFVAFTEKHAVDVRFIEWMPFDSNRW 279
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A182J625_9DIPT (GTP 3',8-cyclase n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182J625_9DIPT) HSP 1 Score: 226 bits (575), Expect = 5.310e-69 Identity = 118/224 (52.68%), Postives = 150/224 (66.96%), Query Frame = 1 Query: 1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRWE 672 S L D FGRFH+YLRISLTERCNLRC YCMP DGVPL E+LL+S E+ R+ +F A G+ K+RLTGGEP +RKDL +IVG ++ANP + +VGITTNG++L R+L LQ+AGL +NVS+DTL A++ +ITRR G R + I+ A+ GY R KVNCV+M G ND+E+ DF+ L + VDVRFIE+MPF NRWE Sbjct: 82 SPLSDRFGRFHSYLRISLTERCNLRCKYCMPADGVPLTQKEQLLTSAEVIRLANLFVAEGIRKIRLTGGEPTVRKDLTEIVGQLKANPLLESVGITTNGLMLTRQLVGLQRAGLDALNVSLDTLRAARYEQITRRK--GWERVIAGIDLAIQLGY------------------------RPKVNCVLMKGFNDDEICDFVELTKDRDVDVRFIEYMPFSGNRWE 279
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A2P4X0W1_9STRA (GTP 3',8-cyclase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X0W1_9STRA) HSP 1 Score: 226 bits (575), Expect = 5.760e-69 Identity = 118/223 (52.91%), Postives = 148/223 (66.37%), Query Frame = 1 Query: 1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669 + L D FGR H YLRISLTERCNLRC YCMPEDGVPLQPAE LL++ EI R+ +FA++GV ++RLTGGEPLLR+DL ++V +RA P + +VGITTNG+ L+R+L LQQAG +N+S+DTL P KF+ ITRR G R + +I A A G+ LK+NCVV N +E+ DF+ + AVDVRFIEWMPFD NRW Sbjct: 82 TQLVDRFGRAHTYLRISLTERCNLRCQYCMPEDGVPLQPAEDLLTTSEIIRLAKLFASSGVKRIRLTGGEPLLRRDLVELVTQLRAIPGIESVGITTNGITLQRKLLALQQAGADRLNISLDTLKPEKFAHITRRQ--GFTRVMNSIVEAQALGFSP-----------------------LKINCVVQRHFNLDEVVDFVAFTKNHAVDVRFIEWMPFDSNRW 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1215.2.1 >prot_P-wetherbeei_contig1215.2.1 ID=prot_P-wetherbeei_contig1215.2.1|Name=mRNA_P-wetherbeei_contig1215.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp MLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARback to top mRNA from alignment at P-wetherbeei_contig1215:6271..7411+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1215.2.1 ID=mRNA_P-wetherbeei_contig1215.2.1|Name=mRNA_P-wetherbeei_contig1215.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1141bp|location=Sequence derived from alignment at P-wetherbeei_contig1215:6271..7411+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1215:6271..7411+ >mRNA_P-wetherbeei_contig1215.2.1 ID=mRNA_P-wetherbeei_contig1215.2.1|Name=mRNA_P-wetherbeei_contig1215.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig1215:6271..7411+ (Phaeothamnion wetherbeei SAG_119_79)back to top |