mRNA_P-wetherbeei_contig1215.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1215.2.1
Unique NamemRNA_P-wetherbeei_contig1215.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: D7FKR1_ECTSI (GTP 3',8-cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR1_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 7.520e-85
Identity = 133/224 (59.38%), Postives = 161/224 (71.88%), Query Frame = 1
Query:    1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRWE 672
            SML D  GR HNYLRISLTERCNLRCVYCMPEDGV LQP  ++++ +EI R+ +MF  AGVDK+RLTGGEPL+RKDLPDIV A+ +   VRNVG+TTNG+ L+R++P L++AGLTHINVS+DTL P +F+ ITRR   GL   L +++AALA GYG                       RLK+NCVVM GVN +EL DFL       +DVRFIEWMPFDDNRW+
Sbjct:   39 SMLSDTHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQSKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLEGVRNVGVTTNGINLKRKIPALREAGLTHINVSLDTLQPDRFAAITRRK--GLDTVLASLDAALAHGYGG----------------------RLKINCVVMNGVNTDELADFLEFTRDQEIDVRFIEWMPFDDNRWK 238          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A835ZCI4_9STRA (GTP 3',8-cyclase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI4_9STRA)

HSP 1 Score: 254 bits (649), Expect = 9.510e-80
Identity = 131/223 (58.74%), Postives = 160/223 (71.75%), Query Frame = 1
Query:    1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            SML D  GRFHNYLRISLTERCNLRC YCMPEDGV LQP   LL+++EIARV  +F  +GVDKVRLTGGEPLLR+DL D+VG I A   VR++G+TTNG++L++R+  L  AGL+H+NVS+DTL   +F+ ITRR   GL + L  I+AAL AG+G                       RLK+NCVVMGGVN++EL  F+ LG +  +DVRFIEWMPFDDNRW
Sbjct:  109 SMLVDTHGRFHNYLRISLTERCNLRCTYCMPEDGVSLQPQSHLLTTDEIARVAQLFVRSGVDKVRLTGGEPLLRRDLADVVGRISAL-GVRHIGVTTNGLVLKQRVQALAAAGLSHVNVSLDTLQEQRFNAITRRR--GLEQVLAGIDAALDAGFGG----------------------RLKINCVVMGGVNEDELAAFVELGSSRPLDVRFIEWMPFDDNRW 306          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: UPI0018856050 (LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein 1-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018856050)

HSP 1 Score: 234 bits (598), Expect = 3.110e-73
Identity = 123/223 (55.16%), Postives = 151/223 (67.71%), Query Frame = 1
Query:    1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            + L D FGRFH+YLRISL+ERCNLRC YCMPE+GVPL P   LL++EE+ R+  +FAAAGV KVRLTGGEPL+R DL D++  ++A P ++ V +TTN ++L RRL  LQ AGL  IN+ +DTL PAKF  ITRR   G  R   +I+ ALAAGY                         +K+NCVVM GVNDEEL DF+ L ET  +DVRFIE+MPFD NRW
Sbjct:   61 NFLTDSFGRFHDYLRISLSERCNLRCQYCMPEEGVPLTPKSHLLTAEEVVRLAGLFAAAGVTKVRLTGGEPLVRADLADVIAGLKAIPGIQWVAMTTNAVVLHRRLAALQAAGLDAINIXLDTLVPAKFELITRRR--GFHRVWQSIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFVALTETFRLDVRFIEYMPFDGNRW 258          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A6A4W5R5_AMPAM (GTP 3',8-cyclase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W5R5_AMPAM)

HSP 1 Score: 234 bits (596), Expect = 3.350e-72
Identity = 123/221 (55.66%), Postives = 148/221 (66.97%), Query Frame = 1
Query:    7 LRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            L D FGRFH+YLRISLTERCNLRC YCMPEDGVPL     LL+++E+ R+  +F+AAGV KVRLTGGEPL+R DL DI+  ++    +R+V ITTNG++L RRL  LQ AGL  +N+S+DTL PAKF  I+RR   G  R    I+ ALAAGY                         +K+NCVVM GVNDEEL DF  L ET  +DVRFIE+MPFD NRW
Sbjct:   80 LTDSFGRFHDYLRISLTERCNLRCTYCMPEDGVPLTERSHLLTTDEVIRLAGLFSAAGVTKVRLTGGEPLVRADLADIIAGLKTVAGIRSVAITTNGVVLARRLAALQAAGLDALNISLDTLVPAKFELISRRR--GFHRVWQGIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFATLAETYRLDVRFIEYMPFDGNRW 275          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: UPI001884A5D0 (molybdenum cofactor biosynthesis protein 1-like n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884A5D0)

HSP 1 Score: 236 bits (603), Expect = 3.200e-70
Identity = 124/223 (55.61%), Postives = 152/223 (68.16%), Query Frame = 1
Query:    1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            + L D FGRFH+YLRISL+ERCNLRC YCMPE+GVPL P   LL++EE+ R+  +FAAAGV KVRLTGGEPL+R DL D++  ++A P ++ V +TTN ++L RRL  LQ AGL  IN+S+DTL PAKF  ITRR   G  R   +I+ ALAAGY                         +K+NCVVM GVNDEEL DF+ L ET  +DVRFIE+MPFD NRW
Sbjct:   61 NFLTDSFGRFHDYLRISLSERCNLRCQYCMPEEGVPLTPKSHLLTAEEVVRLAGLFAAAGVTKVRLTGGEPLVRADLADVIAGLKAIPGIQWVAMTTNAVVLHRRLAALQAAGLDAINISLDTLVPAKFELITRRR--GFHRVWQSIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFVALTETFRLDVRFIEYMPFDGNRW 258          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A087SAI5_AUXPR (GTP 3',8-cyclase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SAI5_AUXPR)

HSP 1 Score: 226 bits (575), Expect = 5.240e-70
Identity = 117/222 (52.70%), Postives = 150/222 (67.57%), Query Frame = 1
Query:    4 MLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            ML D FGR H+YLRISLTERCNLRC+YCMP++GV L PA  LLSSEEI R+  +F +AGVDK+RLTGGEP LRKDL  +V ++ A P + ++GITTNG+ L R+L  L+ AGLTH+N+S+DTL P +F  +TRR   G  R L +I+ A+A GY                         +KVN VVM GVND+E+ DF+ +   A ++VRFIE+MPFD N W
Sbjct:    1 MLTDSFGRVHSYLRISLTERCNLRCLYCMPDEGVELTPALHLLSSEEILRLARLFVSAGVDKIRLTGGEPTLRKDLVRLVASLSALPGLASIGITTNGLTLGRQLAALRSAGLTHLNISLDTLRPDRFVTLTRRQ--GHARVLASIQEAIAQGYDP-----------------------VKVNVVVMRGVNDDEIADFVEMTRHAPINVRFIEYMPFDGNVW 197          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: UPI001C924BB0 (molybdenum cofactor biosynthesis protein 1-like isoform X1 n=7 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C924BB0)

HSP 1 Score: 234 bits (596), Expect = 1.270e-69
Identity = 123/221 (55.66%), Postives = 148/221 (66.97%), Query Frame = 1
Query:    7 LRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            L D FGRFH+YLRISLTERCNLRC YCMPEDGVPL     LL+++E+ R+  +F+AAGV KVRLTGGEPL+R DL DI+  ++    +R+V ITTNG++L RRL  LQ AGL  +N+S+DTL PAKF  I+RR   G  R    I+ ALAAGY                         +K+NCVVM GVNDEEL DF  L ET  +DVRFIE+MPFD NRW
Sbjct:   80 LTDSFGRFHDYLRISLTERCNLRCTYCMPEDGVPLTERSHLLTTDEVIRLAGLFSAAGVTKVRLTGGEPLVRADLADIIAGLKTVAGIRSVAITTNGVVLARRLAALQAAGLDALNISLDTLVPAKFELISRRR--GFHRVWQGIQTALAAGYDP-----------------------VKLNCVVMRGVNDEELEDFATLAETYRLDVRFIEYMPFDGNRW 275          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A329RR81_9STRA (GTP 3',8-cyclase n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RR81_9STRA)

HSP 1 Score: 226 bits (577), Expect = 2.880e-69
Identity = 119/223 (53.36%), Postives = 147/223 (65.92%), Query Frame = 1
Query:    1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            S L D FGR H YLRISLTERCNLRC YCMPEDGVPLQP E LL++ EI R+  +FA++GV ++RLTGGEPLLR+DL ++V  IRA P + +VGITTNG+ L+++L  LQQAG+  +NVS+DTL P KF+ ITRR   G  R + +I  A   G+                         LK+NCVV    N +E+ DF+   E  AVDVRFIEWMPFD NRW
Sbjct:   82 SQLLDRFGRAHTYLRISLTERCNLRCRYCMPEDGVPLQPTEELLTTSEITRLAKVFASSGVKRIRLTGGEPLLRRDLVELVAQIRAIPGIESVGITTNGITLQKKLLALQQAGVDRLNVSLDTLKPDKFAHITRRQ--GFTRVMNSILEAQTLGFSP-----------------------LKINCVVQRRFNLDEVVDFVAFTEKHAVDVRFIEWMPFDSNRW 279          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A182J625_9DIPT (GTP 3',8-cyclase n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182J625_9DIPT)

HSP 1 Score: 226 bits (575), Expect = 5.310e-69
Identity = 118/224 (52.68%), Postives = 150/224 (66.96%), Query Frame = 1
Query:    1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRWE 672
            S L D FGRFH+YLRISLTERCNLRC YCMP DGVPL   E+LL+S E+ R+  +F A G+ K+RLTGGEP +RKDL +IVG ++ANP + +VGITTNG++L R+L  LQ+AGL  +NVS+DTL  A++ +ITRR   G  R +  I+ A+  GY                        R KVNCV+M G ND+E+ DF+ L +   VDVRFIE+MPF  NRWE
Sbjct:   82 SPLSDRFGRFHSYLRISLTERCNLRCKYCMPADGVPLTQKEQLLTSAEVIRLANLFVAEGIRKIRLTGGEPTVRKDLTEIVGQLKANPLLESVGITTNGLMLTRQLVGLQRAGLDALNVSLDTLRAARYEQITRRK--GWERVIAGIDLAIQLGY------------------------RPKVNCVLMKGFNDDEICDFVELTKDRDVDVRFIEYMPFSGNRWE 279          
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Match: A0A2P4X0W1_9STRA (GTP 3',8-cyclase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X0W1_9STRA)

HSP 1 Score: 226 bits (575), Expect = 5.760e-69
Identity = 118/223 (52.91%), Postives = 148/223 (66.37%), Query Frame = 1
Query:    1 SMLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIARVTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGMLLERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAALAAGYGSSVPGGSSDVXXXXXXXXXXXXXRLKVNCVVMGGVNDEELGDFLRLGETAAVDVRFIEWMPFDDNRW 669
            + L D FGR H YLRISLTERCNLRC YCMPEDGVPLQPAE LL++ EI R+  +FA++GV ++RLTGGEPLLR+DL ++V  +RA P + +VGITTNG+ L+R+L  LQQAG   +N+S+DTL P KF+ ITRR   G  R + +I  A A G+                         LK+NCVV    N +E+ DF+   +  AVDVRFIEWMPFD NRW
Sbjct:   82 TQLVDRFGRAHTYLRISLTERCNLRCQYCMPEDGVPLQPAEDLLTTSEIIRLAKLFASSGVKRIRLTGGEPLLRRDLVELVTQLRAIPGIESVGITTNGITLQRKLLALQQAGADRLNISLDTLKPEKFAHITRRQ--GFTRVMNSIVEAQALGFSP-----------------------LKINCVVQRHFNLDEVVDFVAFTKNHAVDVRFIEWMPFDSNRW 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1215.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKR1_ECTSI7.520e-8559.38GTP 3',8-cyclase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835ZCI4_9STRA9.510e-8058.74GTP 3',8-cyclase n=1 Tax=Tribonema minus TaxID=303... [more]
UPI00188560503.110e-7355.16LOW QUALITY PROTEIN: molybdenum cofactor biosynthe... [more]
A0A6A4W5R5_AMPAM3.350e-7255.66GTP 3',8-cyclase n=2 Tax=Amphibalanus amphitrite T... [more]
UPI001884A5D03.200e-7055.61molybdenum cofactor biosynthesis protein 1-like n=... [more]
A0A087SAI5_AUXPR5.240e-7052.70GTP 3',8-cyclase n=1 Tax=Auxenochlorella protothec... [more]
UPI001C924BB01.270e-6955.66molybdenum cofactor biosynthesis protein 1-like is... [more]
A0A329RR81_9STRA2.880e-6953.36GTP 3',8-cyclase n=11 Tax=Phytophthora TaxID=4783 ... [more]
A0A182J625_9DIPT5.310e-6952.68GTP 3',8-cyclase n=1 Tax=Anopheles atroparvus TaxI... [more]
A0A2P4X0W1_9STRA5.760e-6952.91GTP 3',8-cyclase n=1 Tax=Phytophthora palmivora va... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1215contigP-wetherbeei_contig1215:6271..7411 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FKR1
Preferred nameCNX2
PFAMsFer4_12,MoaC,Mob_synth_C,Radical_SAM
Model size672
Max annot lvl2759|Eukaryota
KEGG rclassRC03420,RC03425
KEGG koko:K03639,ko:K20967
KEGG ReactionR09394,R11372
KEGG Pathwayko00790,ko01100,ko04122,map00790,map01100,map04122
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009536,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons3
Evalue2.38e-85
EggNOG OGsCOG2896@1|root,KOG2876@2759|Eukaryota
Ec32 ortholog descriptioncyclic pyranopterin monophosphate synthase
Ec32 orthologEc-21_001800.1
EC4.1.99.22,4.6.1.17
Descriptioncyclic pyranopterin monophosphate synthase activity
Cds size669
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185939.2405484-UTR-P-wetherbeei_contig1215:6270..62731683185939.2405484-UTR-P-wetherbeei_contig1215:6270..6273Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1215 6271..6273 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185939.2520325-CDS-P-wetherbeei_contig1215:6273..64801683185939.2520325-CDS-P-wetherbeei_contig1215:6273..6480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1215 6274..6480 +
1683185939.2683353-CDS-P-wetherbeei_contig1215:6859..71151683185939.2683353-CDS-P-wetherbeei_contig1215:6859..7115Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1215 6860..7115 +
1683185939.2800963-CDS-P-wetherbeei_contig1215:7205..74111683185939.2800963-CDS-P-wetherbeei_contig1215:7205..7411Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1215 7206..7411 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1215.2.1prot_P-wetherbeei_contig1215.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1215 6274..7411 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1215.2.1

>prot_P-wetherbeei_contig1215.2.1 ID=prot_P-wetherbeei_contig1215.2.1|Name=mRNA_P-wetherbeei_contig1215.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp
MLRDGFGRFHNYLRISLTERCNLRCVYCMPEDGVPLQPAERLLSSEEIAR
VTAMFAAAGVDKVRLTGGEPLLRKDLPDIVGAIRANPAVRNVGITTNGML
LERRLPELQQAGLTHINVSVDTLDPAKFSRITRRPPGGLGRALGAIEAAL
AAGYGSSVPGGSSDVSSSDGGGGGGGGGRLKVNCVVMGGVNDEELGDFLR
LGETAAVDVRFIEWMPFDDNRWE
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mRNA from alignment at P-wetherbeei_contig1215:6271..7411+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1215.2.1 ID=mRNA_P-wetherbeei_contig1215.2.1|Name=mRNA_P-wetherbeei_contig1215.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1141bp|location=Sequence derived from alignment at P-wetherbeei_contig1215:6271..7411+ (Phaeothamnion wetherbeei SAG_119_79)
AGCATGCTCCGTGACGGCTTCGGCCGGTTCCACAACTACCTGCGCATCTC CCTGACGGAGCGCTGCAACCTGCGGTGCGTGTACTGCATGCCGGAGGACG GCGTCCCACTGCAGCCGGCGGAGCGTCTGCTGTCTTCGGAGGAGATCGCG CGAGTGACGGCAATGTTCGCGGCGGCCGGGGTGGACAAGGTCCGGCTAAC AGGCGGCGAGGTCAGTTAACAACAGTTCTTCCAACTTTGTCTTTTCGGTT TTGTTGCCAGTGTATTTGCTTCTTTGACAGGAGAAACACCTAAACTGTTT GGGATTAAAAAAAATCCTTTTTCTTAAAAAATCCGTCTCGGCTAGCCGAA AGCGCTGCTGTTGGGCCTCTTCACATTCCCGATGGTCGCATCAAGGTACA AAGCCTAAAACACACTTGCTCTTAAAGTTTAAGTGAACGTGGTCCGCGTG GTCCGCGCTTTTTTCGTCCACGTTCGGGTTTGACGACAAACTTTTCCTCG CGTCTTGCCTGAAACCAACCGCAATATGCCCATGCTCCCTCTGCCGCACT GCCAACAATTTCTCTTCTCTAATACCGGACGACCCGCAGCCGCTGCTGCG CAAGGACCTGCCAGACATCGTCGGCGCCATCCGCGCCAACCCGGCCGTCC GCAACGTCGGCATCACCACCAACGGCATGCTGCTGGAACGACGCCTACCC GAGCTGCAGCAGGCGGGCCTGACGCACATCAATGTCAGCGTCGACACGCT CGACCCGGCCAAGTTTTCGCGCATCACGCGGCGACCGCCCGGCGGGCTGG GCCGGGCGCTGGGCGCCATCGAGGCGGCACTGGCGGCGGGATACGGTGGC GATGGTGGTGGAAGCAGTAGCAGCGATGGCGCCAACGGTGGAAGTACCAG GGATCGCGACCGCAGCAGCGACGGCGGCGGCGGAGGCAGCAGCGTCCCCG GCGGCAGCAGCGATGTCAGCAGCAGCGACGGCGGCGGCGGTGGTGGTGGC GGGGGCCGGTTAAAGGTGAACTGTGTCGTAATGGGGGGCGTGAACGACGA GGAGCTCGGAGATTTCTTGCGGCTTGGAGAGACGGCGGCGGTCGACGTCC GCTTCATCGAGTGGATGCCGTTCGACGACAACAGGTGGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1215:6271..7411+

>mRNA_P-wetherbeei_contig1215.2.1 ID=mRNA_P-wetherbeei_contig1215.2.1|Name=mRNA_P-wetherbeei_contig1215.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig1215:6271..7411+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCCGTGACGGCTTCGGCCGGTTCCACAACTACCTGCGCATCTCCCT
GACGGAGCGCTGCAACCTGCGGTGCGTGTACTGCATGCCGGAGGACGGCG
TCCCACTGCAGCCGGCGGAGCGTCTGCTGTCTTCGGAGGAGATCGCGCGA
GTGACGGCAATGTTCGCGGCGGCCGGGGTGGACAAGGTCCGGCTAACAGG
CGGCGAGCCGCTGCTGCGCAAGGACCTGCCAGACATCGTCGGCGCCATCC
GCGCCAACCCGGCCGTCCGCAACGTCGGCATCACCACCAACGGCATGCTG
CTGGAACGACGCCTACCCGAGCTGCAGCAGGCGGGCCTGACGCACATCAA
TGTCAGCGTCGACACGCTCGACCCGGCCAAGTTTTCGCGCATCACGCGGC
GACCGCCCGGCGGGCTGGGCCGGGCGCTGGGCGCCATCGAGGCGGCACTG
GCGGCGGGATACGGCAGCAGCGTCCCCGGCGGCAGCAGCGATGTCAGCAG
CAGCGACGGCGGCGGCGGTGGTGGTGGCGGGGGCCGGTTAAAGGTGAACT
GTGTCGTAATGGGGGGCGTGAACGACGAGGAGCTCGGAGATTTCTTGCGG
CTTGGAGAGACGGCGGCGGTCGACGTCCGCTTCATCGAGTGGATGCCGTT
CGACGACAACAGGTGGGAG
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