mRNA_P-wetherbeei_contig1215.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A835YW64_9STRA (PAP-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW64_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.110e-70 Identity = 137/298 (45.97%), Postives = 185/298 (62.08%), Query Frame = 1 Query: 28 GTVLPPWFRPSGFDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNNALDTLSHELYRRARNGEVTNLEVIRFARVPIIKFCHT----ATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSYLYYPIIRAGFASAH 909 G VLPPWFR + P++VL +L+NEILDFC V PT A+ D + A+ +V +A+++ G VFGS +T L +P+SD+DL I N P+NA+ LS +L RR+ GE+ +LEVI A+VPIIKF + + NCDICFN TSG++TG L +Y ARPL LV+K++L + NET+ GG+GSFLL LM +S SV +NLG+LLL F ++G+ FN E GISV GY+F K + RP+LLS+ENP + LDVG NSY I ++ F S H Sbjct: 33 GAVLPPWFRHEHWCPENVLVTLHNEILDFCDLVKPTKAEHEDAERALNFVTQVAEQVL-GNGVAVHVFGSHLTKLLVPSSDLDLVIMNAPSNAIHLLSRDLRRRSNTGEIESLEVIGKAKVPIIKFVYVPPGGTAKLNCDICFNQTSGINTGRQTVALLSEYEPARPLALVMKHYLAQRKHNETYQGGVGSFLLQLMAIS--------------SVQYNLGSLLLHFLHMFGEGFNYEEVGISVQDKGYFFRKDQLGRTDALRPWLLSMENPWETNLDVGKNSYQIQTISQS-FESNH 314
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A7S2H591_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H591_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.740e-63 Identity = 128/290 (44.14%), Postives = 176/290 (60.69%), Query Frame = 1 Query: 31 TVLPPWFRPS--GFDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNNALDTLSHELYRRARNGEVTNLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETF-HGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSYLYYPIIRA 891 ++ PPW +P G P L L+NEIL FC +SPT A+++ V+ + L +K++P AE V+GS +TGL LP+SD+D A+ V L L + ++G V LEVI A+VPIIK H+ + DI FN+ G+ TG +I + ED+P RPL+L+LKYFL ELNET+ GG+GSFLL +MVVS LQ R R D G + +NLG LL+FF LYG F+ GISV G YF K DR W P +P L++VENP++ +D+G N++ + RA Sbjct: 45 SLQPPWHKPRKPGASP---LTVLHNEILRFCDLISPTQAEEDSRAEVVSDIRALVKKVWP--EAELFVYGSTLTGLCLPSSDLDFAVLGVDEPGLKPLHTLADKLRQSGLVNFLEVIDSAKVPIIKVIHSQGQIAADISFNLPDGIHTGWMIRDYCEDFPLLRPLLLLLKYFLSQRELNETYPSGGVGSFLLQIMVVSFLQHRRRSDLARGVASNYNLGAALLDFFDLYGRKFSYPTVGISVRGDGSYFQKHDRRWSYPGKPHLIAVENPINDSIDIGRNAFNVVAVRRA 329
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A6H5K966_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K966_9PHAE) HSP 1 Score: 226 bits (576), Expect = 3.640e-62 Identity = 115/280 (41.07%), Postives = 167/280 (59.64%), Query Frame = 1 Query: 34 VLPPWFRPSGFDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNNALDTLSHELYRRARNGEVTNLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLR--GGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSY 867 + PPW+R S + L +L+NEILD C + PT +K +A+ Y+ + ++ G A+ +FGSQ+TGL LP+SDID + P +A+ +L +YRR GEV + VI+ ARVP++KF H + D+CF+ SG+ +G + RPL++VLK ++ +LNET+HGGIGSFLL LMVV+++Q+ R G NLG LL EFF YG+ N GI++L GG ++ KRD W N PF LS++NP + +D G+NSY Sbjct: 167 IRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPEEKAKTAIAITYIKRVVKENL-GSEAKVEIFGSQLTGLVLPSSDIDSVVLGGPRSAIGSLGAAMYRRQNKGEVREVTVIKKARVPLVKFVHVGSGVQVDVCFDQESGMQSGRAARAMMRQMQPVRPLVMVLKAYMAQRKLNETYHGGIGSFLLQLMVVALVQKCGREARDKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGITLLGEGGGGFYNKRDTGWFNESHPFRLSMQNPHETNVDTGSNSY 445
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A1V9YK13_9STRA (Poly(A) RNA polymerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YK13_9STRA) HSP 1 Score: 221 bits (562), Expect = 3.950e-61 Identity = 127/280 (45.36%), Postives = 170/280 (60.71%), Query Frame = 1 Query: 79 VLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVP--NNALDTLSHELYRRARNGEVTNLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSYLYYPIIRAGFASAHR 912 V L+ EILDF +F+SPT + K A+A + + ++P E FGS +T + LP SD+DL + P AL L+ L G V+ LEVI AR+PI+K H T+ + D FN+TSGL T +++ ++ YP RPL+++LKYFL LNETF GG+GSFLL L+VVS LQQ AR T ++ NLG LL+EF +LYG N+ G+SV GG YF+K +R W NP+RPFLL VENP D DV +NSY ++R+ FA A R Sbjct: 126 VFLQLHEEILDFVSFLSPTQEEIAMRKEAIAAMRTIVTDLWPEATVEA--FGSHLTEMYLPTSDVDLVVQGAPAGKKALWALAGRLEEL---GVVSYLEVIDSARIPIVKLVHAPTQLHMDFSFNITSGLSTADLVMMYMRKYPSFRPLVILLKYFLLQRGLNETFKGGVGSFLLQLLVVSFLQQYARNH--TRSADYLNLGVLLVEFLELYGTSLNAAVVGLSVRNGGAYFMKDERDWHNPDRPFLLCVENPHDPSHDVASNSYDIRKVLRS-FAHAGR 397
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A024GRK5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRK5_9STRA) HSP 1 Score: 221 bits (562), Expect = 8.340e-61 Identity = 133/292 (45.55%), Postives = 177/292 (60.62%), Query Frame = 1 Query: 4 ISFAQPADGTVLPPWFRPS-GFDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNN--ALDTLSHELYRRARNGEVTNLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFN-LGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSY 867 IS ++ + + PW S G++ ++ L+ EILDF F+SP + + + +A + L K++P ET FGS T + LP+SDIDL I P +L L+ E+ R V+ LEVI AR+PI+KF + DI FN++SGL T ++I ++ +P RPL LVLKYFL ELNETF GGIGSFLL LMVVS LQQ R+ +N LG LL+EFF LYG DFN + GISV +GG+YF K +R W++ RPFLLSVENP + +DVG NSY Sbjct: 93 ISTSECIENDHMAPWMNESEGYNHMNLYLCLHEEILDFVHFISPHEEELQARENLIAQMKDLVSKLWPNAAVET--FGSHETQMFLPHSDIDLVIFGAPTGKESLFVLAQEVEAR---DMVSYLEVIDKARIPIVKFVDKNSGIQVDISFNISSGLATADLIKQYMRIFPSFRPLALVLKYFLAQRELNETFQGGIGSFLLQLMVVSFLQQYRRQLGTLYDDFRYNNLGKLLVEFFVLYGRDFNYEQVGISVQKGGFYFNKENRDWLDHNRPFLLSVENPNEPSMDVGKNSY 379
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A7S3ZN42_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZN42_9STRA) HSP 1 Score: 219 bits (558), Expect = 8.750e-61 Identity = 129/290 (44.48%), Postives = 177/290 (61.03%), Query Frame = 1 Query: 82 LASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNNALDTLSHELYRRARN--------GEVT--NLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSYLYYPIIRAGFASAHRRMV 921 L L++EIL F V+P+ ++ + A ++ A+ +P R E VFGS +T L LP+SD+D+ + P +D S + +R R G + +LEV+ AR+P++K+ A+ D+ F++ SGL TG ++ +++ P RPL+LVLK+FL LNETF GG+GS++L LMVVS LQQR R D TG NLG+LLLEFF+LYG D N GISV R G YF KR R+W NP RP LL++ENP D KLDVG NSY Y+ + RA F AH +V Sbjct: 123 LQKLHDEILAFRDVVAPSSTERAAREDAFRTLERAAKSCWP--RCEAKVFGSALTKLELPSSDVDVVVFGAP---VDKGSGGVAKRLRTLASALEDLGAIAPRSLEVVESARIPLVKYVDAASNTAVDVSFDVESGLRTGKLVRSYMDAMPPLRPLVLVLKFFLAQRGLNETFTGGVGSYMLQLMVVSFLQQRHRTDRATGLVSPQNLGSLLLEFFELYGRDLNPTITGISVRRHGAYFPKRSRNWFNPARPNLLAIENPDDDKLDVGKNSYNYHRVRRA-FDHAHDAIV 406
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: F0W4L2_9STRA (Poly(A) RNA polymerase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4L2_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.730e-59 Identity = 130/280 (46.43%), Postives = 170/280 (60.71%), Query Frame = 1 Query: 43 PWFRPS--GFDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNN--ALDTLSHELYRRARNGEVTNLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFN-LGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSY 867 PW + G++ ++ L+ EILDF F+SP D + + +A + L ++P ET FGS T + LP SDIDL I P +L L+ EL R V+ LEVI AR+PI+KF + DI FN++SGL T ++I ++ +P RPL+LVLKYFL ELNETF GGIGSFLL LMVVS LQQ R+ +N LG LL+EFF LYG +FN + GISV +GG+YF K +R W++ RPFLLSVENP + +DVG NSY Sbjct: 108 PWMKKESEGYNHVNLYLCLHEEILDFVHFISPHDEELQARENLIAQMKNLVSNLWPRAAVET--FGSHETQMFLPQSDIDLVIFGAPTGKESLFVLAAELEAR---DMVSYLEVIDKARIPIVKFVDKNSAIQVDISFNISSGLATADLIKQYMRIFPSFRPLVLVLKYFLAQRELNETFQGGIGSFLLQLMVVSFLQQYRRQLGTLYDDFRYNNLGKLLVEFFTLYGREFNYEQVGISVQKGGFYFNKENRDWLDHNRPFLLSVENPNEPTMDVGKNSY 382
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A1V9ZX42_9STRA (Poly(A) RNA polymerase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX42_9STRA) HSP 1 Score: 215 bits (547), Expect = 3.840e-59 Identity = 131/313 (41.85%), Postives = 176/313 (56.23%), Query Frame = 1 Query: 1 FISFAQPADGTV-------LPPWFRP-SGFDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNNALDTLSHELYRRARNGEVTN-LEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSYLYYPIIRAGFASAHR 912 +ISF TV PW R S + ++ L+ EILDF +F+SPT + K A+ + + +++ G E FGS +T + LP SDIDL + P +L R ++ ++ + LEVI AR+PI+K H AT D F+ TSGL T +++ ++ YP RPL++VLKYFL LNETF GG+GSFLL L+VVS LQQ AR T ++ NLG LL+EFF+LYG+ N GI V GG YF+K +R W + RPF+L VENP D DV ANSY + R FA A R Sbjct: 77 YISFGSSPKDTVDRLEERPKAPWMRGRSKYKNRNIFLQLHEEILDFVSFLSPTQEEIAMRKEAIECMQNVVNELWEGASIEA--FGSHVTEMYLPTSDIDLVVYGAPQGKQGLW--DLATRLQDLDIVSYLEVIDSARIPIVKLVHAATNLQIDFSFHGTSGLSTADLVMMYIRKYPSFRPLVIVLKYFLVQRGLNETFKGGVGSFLLQLLVVSFLQQYARNH--TRSNEHLNLGVLLVEFFELYGNSLNQSTVGICVRNGGSYFMKDERDWRDANRPFMLCVENPHDPSHDVAANSYDIRKVFRT-FAHASR 382
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A7S4DIS6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIS6_HETAK) HSP 1 Score: 210 bits (534), Expect = 1.070e-57 Identity = 126/306 (41.18%), Postives = 170/306 (55.56%), Query Frame = 1 Query: 25 DGTVLP---PWFRPSGFDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNNALDTLSHELYRRARN-GEVTNLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSYLYYPIIRAGFASAHRRMVDSM 930 D ++LP PWFRP + L SL+NEILDFC + P+ ++ + + ++FP AE +VFGS++T L LP SDIDLA NV H + + G + LEVI AR+PI+K H ++ + DI FN SGL TG + F+ +P RPL+LV K FL ELNET+ GG+GSFLL LMVVS +Q R +NLG LL++F +LYG FN + G+SV G YF KR N RP L+ VENP + + DVG NSY + R F + R+V ++ Sbjct: 67 DESMLPEYVPWFRPESLN-HSPLVSLHNEILDFCDLIVPSPEEQELRNRTIEDCKAVILELFPD--AEVVVFGSELTQLALPTSDIDLAALNVQEEPKKRHLHRVGAAFKGKGIIDYLEVIDSARIPIVKLRHKESQVHVDISFNQPSGLATGACVQRFMRKFPPVRPLLLVAKKFLQQRELNETYTGGVGSFLLQLMVVSFVQHHLRAAHRASRKFQYNLGALLVDFLELYGKTFNYINVGLSVRHNGTYFNKRQGGCFNAVRPGLICVENPEETETDVGRNSYRVMQVRRV-FEHGYNRLVAAL 368
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Match: A0A024TX62_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX62_9STRA) HSP 1 Score: 211 bits (538), Expect = 1.490e-57 Identity = 144/361 (39.89%), Postives = 194/361 (53.74%), Query Frame = 1 Query: 43 PWFRPSG-FDPDDVLASLNNEILDFCAFVSPTDADKNDVKVAVAYVDGLAQKMFPGRRAETIVFGSQMTGLGLPNSDIDLAINNVPNNA--LDTLSHELYRRARNGEVTNLEVIRFARVPIIKFCHTATRRNCDICFNMTSGLDTGNIICCFLEDYPQARPLILVLKYFLCGLELNETFHGGIGSFLLALMVVSMLQQRARRDSFTGTSVTFNLGTLLLEFFKLYGDDFNSVEAGISVLRGGYYFLKRDRSWMNPERPFLLSVENPVDGKLDVGANSYLYYPIIRAGFASAHRRMVDSMRCFKLRRERFTAAAAEAXXXXXXXXXXXXXXXDDPVSLLSEVIAADELLVERGETWRPDDFG 1116 PW +P + +V L++EILDF F+SPT + K V + L ++ G A FGS T + LP+SDID+ + + P+ L TL+ L G V+ LEV+ AR+PI+KF HT + + D+ F +TSG TG+++ + E +P RPL LVLKYFL LNETF GG+GSFLL LMVVS LQ + R S++ + +LG LL++FF LYG+ FNS + ISV GG Y +K R+W N +RP LLS+ENP D DVGANSY + R FK+ F+ AA D S+L +IA D LL +R PD FG Sbjct: 125 PWMKPGHRYRLPNVFLCLHDEILDFVTFLSPTPEEVKARKALVKTMQDLVASLWDG--ASLSAFGSLFTEMYLPSSDIDMVVLDGPSGKEPLYTLAQRLEDL---GIVSFLEVVDSARIPIVKFVHTESGLSVDVSFGVTSGFATGDLVKGYQEKFPAFRPLTLVLKYFLQQRGLNETFKGGVGSFLLQLMVVSFLQHKNRNSSYSNSMQ--DLGHLLVDFFDLYGNVFNSTDLTISVRDGGAYVMKESRNWKNYQRPDLLSMENPHDTNHDVGANSY------------------EVRRVFKV----FSHAAKVLKAEICHRGSVDMHHDDYGTSILERIIAKDVLLQDRVG---PDTFG 453 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1215.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1215.1.1 >prot_P-wetherbeei_contig1215.1.1 ID=prot_P-wetherbeei_contig1215.1.1|Name=mRNA_P-wetherbeei_contig1215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=674bp FISFAQPADGTVLPPWFRPSGFDPDDVLASLNNEILDFCAFVSPTDADKNback to top mRNA from alignment at P-wetherbeei_contig1215:2..3763- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1215.1.1 ID=mRNA_P-wetherbeei_contig1215.1.1|Name=mRNA_P-wetherbeei_contig1215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3762bp|location=Sequence derived from alignment at P-wetherbeei_contig1215:2..3763- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1215:2..3763- >mRNA_P-wetherbeei_contig1215.1.1 ID=mRNA_P-wetherbeei_contig1215.1.1|Name=mRNA_P-wetherbeei_contig1215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2022bp|location=Sequence derived from alignment at P-wetherbeei_contig1215:2..3763- (Phaeothamnion wetherbeei SAG_119_79)back to top |