mRNA_P-wetherbeei_contig12135.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A438BTG2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BTG2_VITVI) HSP 1 Score: 368 bits (944), Expect = 1.840e-116 Identity = 199/524 (37.98%), Postives = 323/524 (61.64%), Query Frame = 1 Query: 436 IASDLDPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTG-IVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 2004 I+ +P TY+E ++ + +W KA++ E SL E+ T+++ + P +K L +WV ++K + + S RFKARLV +GF+Q++GVD+ +E+ +PV M +RT L + + E+EQ+D+ TA+L+ + EEIYM P+GF G D +V +L++SLYGL+Q+ W +F E G++ + CVF ++ G +I++LYVDD+L++G +++ +LK ++ + F KDLG +LG+R+ RNRS G + + QE Y+ +L+RFNMD P H L+ S E E + PY S +GSLMYA TR D+A+AV V++RF+ P ++HW A K +LRYL GT + + F G G P+ L G+ D+++AGD+D+ +ST+G + AGG V++ SRLQK VA ST EAE++A+ EA + + L+ L++LG Q E LH D+++ + ++ ++ RS+HI +RYH+ R+++ D ++QL T +D LTK L +++ Sbjct: 2 ISDQGEPETYQEVLKHENKTEWLKAMKEEMKSLHENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDF--DEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGND--QLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTSDHCVFVKKYTDGNFIILLLYVDDMLIVGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSS----SQCPTSDEEKNEMQKI-PYASAIGSLMYAMVCTRPDIAHAVGVVSRFISNPGKEHWAAVKWILRYLQGTSKMSLCF--GKGEPI-LDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQ-ERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKALTKDK 512
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR) HSP 1 Score: 365 bits (936), Expect = 1.660e-115 Identity = 207/516 (40.12%), Postives = 318/516 (61.63%), Query Frame = 1 Query: 466 EEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKD-GIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATP--LHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 2004 +EAM SS+A +W++A + EY SL E+ T+++ ELP +RK +G RWV K K ++DG V R+K RLVA+G++Q GVDY +E +PV +RT L+ + + QMD+ TA+LN + EEIYM P G+ G + +V +L++S+YGL+QS W+ T + K++GF + + PCVF R + I+ +YVDDL+LI + + +LK+ + +++K KD+G + ++LG+ V ++++ ++ + Q+ YI +L+++ MD N PAD + L KD G+ + ++ GT YQS+VGSL+YAA TR D+A AV +++F P H A KR+LRYL GT L ++++R L+G+ DA+ AGD D+ RSTTG IF+ GG VS+ S+ Q +VA ST EAEY+AL +A Q L LL LG ++ATP + EDN+ + +A + R++HI IRYHY RE +++ IQL T AD LTK L +++ Sbjct: 2 KEAMLSSNAKEWKEAADLEYESLLENETWDLVELPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDY--DETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIKPGQEH--LVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFVRARQE-LEILAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADANVKLQKDDGVSNPVNPGT-----------YQSIVGSLLYAAMATRPDIAQAVSAVSKFNAKPNTAHMTAVKRILRYLKGTINLALKYQRSES--ETLLGFSDADWAGDQDDRRSTTGNIFLLGGGAVSWLSKKQNTVALSTAEAEYVALSQAAQECTWLTRLLSDLG---MDATPTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQNGQIQLQYCPTEDMKADILTKPLAKQK 496
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 370 bits (951), Expect = 3.350e-115 Identity = 217/540 (40.19%), Postives = 321/540 (59.44%), Query Frame = 1 Query: 409 TYAAGMAAAIASDLDPATYEEAMRSSDA-VQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTG-IVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTK-DGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGG----VVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 2007 T +A A AS++ Y S+ + +KA ++EY + ++GT+E+ LP + + WV KR+ G + R KAR +A+G++Q+ G DY+ APVASM +R LA+ D E++ MD+DTAYL + + E++Y++ P G+E GP+G +V RLR+SLYGL+QS NW+ I +F+ G + PC++ + ++G I++I+LYVDDL++ + +T D+ K DI + F KDL + +LGM + RNR T++I Q YI ML +F M C + P + TLTK DG + +P E Y LVGSL+YAA VTR D+A AV+ L + +QG ++HW+AAKRVLRYL GTR +G+++ + G LVGY DA+ AGD DN RST+G F + G + + ++ Q VA S+ E+E ++ A Q AV +R LL LG Q E T + EDN+AC+ M N+ +R++HI +RYH+ RE +E ++LV T QLAD LTK L RL Sbjct: 178 TMGGSLAFAAASEIVNEDYHLTEDESEVRAERKKAKDAEYQAHMKNGTWELTPLPKGERCISSGWVETDKRDQKGVIVRRKARFIAKGYSQEFGYDYL--HTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEILVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEG--TLTKMDG------KDVKPDNE------YMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSSIRL 701
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: UPI001161C466 (Ty1/Copia family RNAse HI domain-containing protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001161C466) HSP 1 Score: 364 bits (934), Expect = 2.240e-114 Identity = 199/519 (38.34%), Postives = 312/519 (60.12%), Query Frame = 1 Query: 451 DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 2007 DP TY EA+ D+ +W +A++SE S+ + + + + P +GC+W+ K+K DG+V FKARLVA+G++Q+EG+DY ++ +PVA + +RT LAV YFD+EI QMD+ TA+LN + E+IYM P GF S D K V +L+RS+YGL+Q++ +WN ++ K+ GF N PCVF R + +V ++LYVDD+LLIG+ L +K+ + + F KDLG +LG++V R+R L + Q+ YI ++LKRF+M++ +P L+K ST E+ + PY S +GSLMYA TR D+A+AV V +R+ P E+HW + K +L+YL T+ + + F GNG L++ GY D++ D+D+ +ST+G +F+ GG VS+ S Q +A STMEAEY+A EA + A + ++G +A PL+ DN + +A ++S+HI RYH R+ +E +++ + +AD LTK L ++++ Sbjct: 51 DPKTYNEAISDIDSEKWLEAMKSEIDSMHSNQVWTLVDPPEGIVPIGCKWIFKRKIGADGNVETFKARLVAKGYSQREGIDY--QDTFSPVAMLKSIRTLLAVAAYFDYEIWQMDVKTAFLNGYLEEDIYMEQPLGFTSSDTDHK--VCKLQRSIYGLKQASRSWNTRFNDVIKKFGFIKNEEEPCVFKRVSGSAVVFLVLYVDDILLIGNDIPMLTSVKMWLSKEFSMKDLGEASFILGIKVYRDRPNRMLGLSQKMYIEEVLKRFSMENSKRGLIPFRHGIHLSKKMCPSTPEE-----IERMSKIPYASAIGSLMYAMLCTRPDIAHAVSVTSRYQSNPGEEHWTSVKCILKYLRRTKDMMLVF--GNG-ELQVQGYTDSDFMSDIDDRKSTSGSLFVCNGGAVSWKSSKQTVIADSTMEAEYIAASEAAKEAFWYKKFAAEIGVMPSDAIPLYCDNNGAIALAKEPRSHQKSKHIERRYHLIRDYLEKGYVEVKRVNSTDNVADPLTKPLGQQKI 557
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A2N9HZ30_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HZ30_FAGSY) HSP 1 Score: 375 bits (963), Expect = 3.310e-114 Identity = 207/519 (39.88%), Postives = 309/519 (59.54%), Query Frame = 1 Query: 451 DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 2007 +P +Y+EA++ D+++W A++ E SL T+E+ ELP +KAL +WV + K DGS R+KARLV +GF Q+EGVDY ++ +PV + +R L + + +EQ+D+ TA+L+ + E+IYM P+GF V G + +V +LR+SLYGL+Q+ W +F GF C + + + +I++LYVDD+L+ G E++ LK + ++F KDLG +LGMR+TR+R+ GTLK+ Q Y+ +L RF+MD P +H LTKD S TE + PY S +GSLMYA TR D+A+AV V++R+M P +QHW A K +LRYL GT G + F G ++L GY D++LAGD+D +STTG ++ G VS+ SRLQK VA ST EAEY+A+ EAG+ V L+ LE+LG Q + LH D+++ + +A + R++HI +RYH+ R L++ + L AD LTK + E+L Sbjct: 468 EPESYDEALQIEDSIKWELAMKDEMNSLMTSQTWELIELPQRKKALHNKWVYRVKEEHDGSK-RYKARLVVKGFQQKEGVDYT--DIFSPVVKLTTIRLVLGIVAAENLHLEQLDVKTAFLHGDLEEDIYMHQPQGFIVQGKEN--LVCKLRKSLYGLKQAPRQWYKKFDSFMYSTGFTRCQADHCCYVKSFDNSYIILLLYVDDMLIAGSSIEEINNLKKQLSKQFAMKDLGPAKQILGMRITRDRANGTLKLSQTEYVKKILSRFSMDEAKPVSTPLGSHFRLTKDQ-----SPKTEQEQAYMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYMSNPGKQHWEAVKWILRYLKGTLGTSLCF---TGADMKLTGYVDSDLAGDVDTRKSTTGYVYTLGGTAVSWVSRLQKIVALSTTEAEYVAVTEAGKEMVWLQGFLEELGQRQKKGI-LHSDSQSAIFLAKNPAFHSRTKHIQLRYHFIRSLLDGGQLTLEKILGAKNPADMLTKGVTIEKL 972
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM) HSP 1 Score: 360 bits (923), Expect = 9.050e-114 Identity = 194/500 (38.80%), Postives = 304/500 (60.80%), Query Frame = 1 Query: 511 LESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVR--PYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 2004 ++SE SL++H T+E+ ++P ++KA+G +WV + KR+ +G+V +FKARLVA+G+ Q+ G+D+ + APVA + + +LA D E E +D+DTA+L V EE+YM P GFE M L+++LYG +Q+A WN ++ ++ GF + PCV+ RR I+++YVDDL+L K ++ +K+ + + F K+LG + + LG+ + RNR + T+ ++Q YI + ++F +D C A + PAD ++ L K T E+ V PY+ LVG+LMY A TR D+A AV +A+F + + HW+AAKR+L+YL T+ +GI F G +GY DAN AGDLD RSTTG +F G +S+ S+ Q +VA S+ EAEY +L+ A Q AV LR LL+ +G AT +++DN+ C+ +A + + R++HIAI++H+ R+ IE VI+L T +ADG+T L R++ Sbjct: 1 MKSEMKSLEDHNTWELVKMPRDKKAIGFKWVFRIKRDPNGNVVKFKARLVAKGYTQRPGIDFT--DTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQS--NPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYSIVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPADCNSKLVK------------MTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKG--EPIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYTSLYSATQEAVRLRLLLKDMGYEDQGATLIYQDNQGCIALAKNPVYHARTKHIAIKFHFLRDKIERAVIRLDYKPTDEMIADGMTNALTRDK 482
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A438E2Y0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E2Y0_VITVI) HSP 1 Score: 367 bits (942), Expect = 1.120e-113 Identity = 199/519 (38.34%), Postives = 321/519 (61.85%), Query Frame = 1 Query: 436 IASDLDPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTG-IVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKN 1989 I+ +P TY+E ++ + +W KA++ E SL E+ T+++ + P +K L +WV ++K + + S RFKARLV +GF+Q++GVD+ +E+ +PV M +RT L + + E+EQ+D+ TA+L+ + EEIYM P+GF G D +V +L++SLYGL+Q+ W +F E G++ + CVF ++ G +I++LYVDD+L++G +++ +LK ++ + F KDLG +LG+R+ R+RS G + + QE Y+ +L+RFNMD P H L+ S E E + PY S +GSLMYA TR D+A+AV V++RFM P ++HW A K +LRYL GT + + F G G P+ LVG+ D+++AGD+D+ +ST+G + AGG V++ SRLQK VA ST EAE++A+ EA + + L+ L++LG Q E LH D+++ + ++ ++ RS+HI +RYH+ R+++ D ++QL T +D LTK+ Sbjct: 209 ISDQGEPETYQEVLKHENKTEWLKAMKEEMKSLHENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDF--DEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGND--QLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTSDHCVFVKKYPDGNFIILLLYVDDMLIVGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRDRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSS----SQCPTSDEEKNEMQKI-PYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVKWILRYLQGTSKMSLCF--GKGEPI-LVGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQ-ERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKD 714
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Pentapetalae TaxID=1437201 RepID=POLX_TOBAC) HSP 1 Score: 380 bits (975), Expect = 2.070e-113 Identity = 209/524 (39.89%), Postives = 323/524 (61.64%), Query Frame = 1 Query: 436 IASDLDPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLN-TGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRER 2004 I+ D +P + +E + + Q KA++ E SLQ++GT+++ ELP ++ L C+WV K K++ D + R+KARLV +GF Q++G+D+ +E+ +PV M +RT L++ D E+EQ+D+ TA+L+ + EEIYM P+GFEV+G K MV +L +SLYGL+Q+ W +F K + + PCV+ +R + +I++LYVDD+L++G K + +LK D+ + F KDLG +LGM++ R R+ L + QE+YI +L+RFNM + P H L+K +T+ A PY S VGSLMYA TR D+A+AV V++RF++ P ++HW A K +LRYL GT G + F G P+ L GY DA++AGD+DN +S+TG +F +GG +S+ S+LQK VA ST EAEY+A E G+ + L+ L++LG Q E + A L NS H R ++HI +RYH+ RE+++D ++++ +T+ AD LTK +PR + Sbjct: 805 ISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDF--DEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK--KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEE-----KGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF--GGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHAR-TKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNK 1315
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A4Y1QVA4_PRUDU (Toll-Interleukin-Resistance domain family protein n=10 Tax=fabids TaxID=91835 RepID=A0A4Y1QVA4_PRUDU) HSP 1 Score: 361 bits (927), Expect = 2.260e-113 Identity = 206/519 (39.69%), Postives = 307/519 (59.15%), Query Frame = 1 Query: 451 DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHEDNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERL 2007 +P Y+EA ++ DA +W A++ E SL + T+E+ ELP +KAL +WV + K DGS R+KARLV +GF Q+EGVDY ++ APV ++ +R+ L++ D +EQ+D+ TA+L+ + EEIYM P+GF G K MV RL++SLYGL+Q+ W +F + GF C + +R + +I++LYVDD+L+ G ++ +LK + + F KDLG +LGM++TR++ G L++ Q YI +L+RFNM P +H L+KD S TE + A PY S +GSLMYA TR D+ +AV V++RFM P + HW A K +LRYL GT + F +G L++ GY DA+ G++D+ RSTTG IF VS+ S+LQK V ST EAEY+A+ EA + + L+ LL +LG Q E LH D+++ + +A ++ R++HI +RYH+ R L+ED V+ L AD LTK + ++L Sbjct: 55 EPECYDEACQTGDASKWELAMKDEMRSLISNQTWELAELPVGKKALHNKWVYRVKEEHDGSK-RYKARLVVKGFQQKEGVDYT--DIFAPVVKLNTIRSVLSIVAIEDLYLEQLDVKTAFLHGDLDEEIYMHQPEGFSERG--NKNMVCRLKKSLYGLKQAPRQWYKKFDSFMHKEGFQKCNADHCCYFKRYRSSYIILLLYVDDMLVAGSDMDDIRRLKQQLSKEFDMKDLGPAKKILGMQITRDKHRGILQLSQTEYINRVLQRFNMGDAKPVSTPLASHFHLSKDQ-----SPQTEEERDLMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLQGTSEKCLYFGKGE---LKVQGYVDADFGGEVDHRRSTTGYIFTVGNTAVSWMSQLQKIVTLSTTEAEYVAVTEASKEMIWLQGLLTELGFKQ-EKNVLHSDSQSAIHLAKNSAFHSRTKHIGLRYHFIRSLLEDEVLTLEKIQGSKNPADMLTKTVTIDKL 559
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Match: A0A2U1Q8Q6_ARTAN (Polyprotein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1Q8Q6_ARTAN) HSP 1 Score: 360 bits (924), Expect = 3.130e-112 Identity = 202/529 (38.19%), Postives = 301/529 (56.90%), Query Frame = 1 Query: 436 IASDL-DPATYEEAMRSSDAVQWRKALESEYLSLQEHGTFEICELPAERKALGCRWVLKKKRNTDGSVARFKARLVAQGFNQQEGVDYVPEELSAPVASMDEVRTALAVGTYFDWEIEQMDIDTAYLNAPVSEEIYMRPPKGFEVSGPDGKPMVWRLRRSLYGLRQSAFNWNYTISNFFKELGFAANPTSPCVFTRRLNTGIVIIILYVDDLLLIGDKKTELDQLKLDIGQRFKAKDLGSVHHLLGMRVTRNRSEGTLKIDQERYICDMLKRFNMDSCNASYLPADTHTTLTKDGIVSTLSRGTEPTAEKTAVRPYQSLVGSLMYAAYVTRLDVANAVRVLARFMQGPTEQHWLAAKRVLRYLAGTRGLGIEFRRGNGGPLRLVGYCDANLAGDLDNGRSTTGVIFMAAGGVVSYASRLQKSVARSTMEAEYMALFEAGQTAVLLRNLLEKLGAAQLEATPLHE--DNEACMLMANSAGHTRRSRHIAIRYHYTRELIEDNVIQLVSTATHGQLADGLTKNLPRERLTE 2013 I DL +P +Y+ AM S + +W+ A+ E S++++ +E + P K +G +W+ K K + DG V +KARLVA+G+ Q GVDY EE +P+A + +R LA+ TY+D+EI QMD+ TA+LN + E+IYM P+GF P+ V +L+RS+YGL+Q++ WN K GF N PCV+ + + + +ILYVDD+L++G+ L ++K +G+ F KDLG ++LG+++ R+RS+ + + Q YI +LKRFNM + YLP T + G+ S L T PY S VGS+MYA TR DVA A + +R+ Q P +HW A K +L+YL TR + + + L + GYCDA+ D D+ +S TG +F+ GG V + S+ Q ++A S EAEY+A EA AV +R + LG P++ DN A + AN G + +RH RYHY RE ++ I L+ T LAD TK LP+E+LT+ Sbjct: 93 ILGDLNEPTSYKAAMNSPEKEKWQGAMNGEMQSMRDNEVWEEVDPPPNTKVVGSKWLYKLKTDMDGIVHTYKARLVAKGYTQTFGVDY--EETFSPLADIRAIRILLAIATYYDYEIWQMDVKTAFLNGRLDEDIYMAQPEGFV--NPEFPNRVCKLKRSIYGLKQASRQWNKRFDAEIKSFGFTQNLDEPCVYQKASGSNVTFLILYVDDILILGNHIPSLKEVKSYLGKCFAMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYIDKILKRFNMQNSKKGYLPMQT-----EHGLSSKLCASTPEEVAIMKKVPYASAVGSIMYAVRCTRPDVAFAQNMTSRYQQNPGGKHWHAVKGILKYLRNTRDMFLVYGGNPDAELDVTGYCDASFETDKDDTKSQTGYVFVINGGAVDWKSKKQTTIAMSVTEAEYIAASEAAMEAVWIRKFISGLGVMPSIELPINMYCDNSAAVTFANEPGVMKGARHFPRRYHYVREQVDIGEINLLKIHTDNNLADPFTKALPKEKLTQ 612 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12135.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12135.1.1 >prot_P-wetherbeei_contig12135.1.1 ID=prot_P-wetherbeei_contig12135.1.1|Name=mRNA_P-wetherbeei_contig12135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=671bp GEPEPNLVAESEPATAAASYWLPNGYEIVPKFDQASMGRRLVKKEIAYKWback to top mRNA from alignment at P-wetherbeei_contig12135:25..2039+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12135.1.1 ID=mRNA_P-wetherbeei_contig12135.1.1|Name=mRNA_P-wetherbeei_contig12135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2015bp|location=Sequence derived from alignment at P-wetherbeei_contig12135:25..2039+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12135:25..2039+ >mRNA_P-wetherbeei_contig12135.1.1 ID=mRNA_P-wetherbeei_contig12135.1.1|Name=mRNA_P-wetherbeei_contig12135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2013bp|location=Sequence derived from alignment at P-wetherbeei_contig12135:25..2039+ (Phaeothamnion wetherbeei SAG_119_79)back to top |