mRNA_P-wetherbeei_contig12133.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: A0A8D5LXK0_9BURK (UPF0225 protein MIZ03_4724 n=1 Tax=Rhodoferax sp. MIZ03 TaxID=2798804 RepID=A0A8D5LXK0_9BURK) HSP 1 Score: 198 bits (503), Expect = 3.130e-63 Identity = 92/130 (70.77%), Postives = 102/130 (78.46%), Query Frame = 1 Query: 4 KKALPRYLPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDGQDQ 393 K AL + CPC SG+ Y ACC WH G AG APTPEALMRSRYSAY +GLIDYLL TWHPST PGELELSP+KW+GLEV +A+ GDAGVVEFVA R NGR R+HEVSRF+R+DGRW YIDGQ Q Sbjct: 3 KNALASHATCPCDSGQPYGACCGPWHTGYAAGQQAPTPEALMRSRYSAYVLGLIDYLLATWHPSTSPGELELSPVKWLGLEVRHAQATGDAGVVEFVARYRENGRGVRLHEVSRFVREDGRWLYIDGQMQ 132
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: A0A1H0SCY4_9BURK (UPF0225 protein SAMN05216303_104137 n=1 Tax=Rhodoferax sp. OV413 TaxID=1855285 RepID=A0A1H0SCY4_9BURK) HSP 1 Score: 197 bits (502), Expect = 4.440e-63 Identity = 90/130 (69.23%), Postives = 105/130 (80.77%), Query Frame = 1 Query: 1 LKKAL-PRYLPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDGQ 387 +KK L P + PCPC SG+ Y CC WH G++AG +APT EALMRSRYS Y +GL++YLL TWHPST PG+LEL P+KW+GLEV +A AGDAGVVEFVA CR GRA+RMHE SRF+RQDGRWYYIDGQ Sbjct: 1 MKKNLHPAHAPCPCDSGKPYAECCAPWHKGMDAGIYAPTAEALMRSRYSGYVLGLLEYLLFTWHPSTAPGDLELPPVKWLGLEVRHAMEAGDAGVVEFVARCRDGGRAERMHETSRFVRQDGRWYYIDGQ 130
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: A0A4P5U8M4_9BURK (UPF0225 protein LBMAG30_14710 n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U8M4_9BURK) HSP 1 Score: 196 bits (498), Expect = 1.810e-62 Identity = 87/124 (70.16%), Postives = 98/124 (79.03%), Query Frame = 1 Query: 13 LPRYLPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDG 384 L + PCPC SG+ Y CC WH GL G HAPTPE LMRSRYSAY +GLIDYLL TWHP+T PGELEL P+KW+GLEV A+ + DAGVVEFVA CR NGRAQRMHE SRF+R+ GRWYY+DG Sbjct: 6 LSSHAPCPCDSGQTYVDCCGPWHAGLAQGLHAPTPETLMRSRYSAYVLGLIDYLLATWHPATAPGELELPPLKWLGLEVRLAQASADAGVVEFVARCRENGRAQRMHETSRFVREQGRWYYVDG 129
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: A0A1J5BXL3_9BURK (UPF0225 protein AUK51_11155 n=2 Tax=unclassified Comamonadaceae TaxID=83494 RepID=A0A1J5BXL3_9BURK) HSP 1 Score: 194 bits (494), Expect = 7.350e-62 Identity = 89/131 (67.94%), Postives = 102/131 (77.86%), Query Frame = 1 Query: 4 KKALPRYLPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDGQDQS 396 K AL + CPC SG+ Y CC WH GL G HAPTPEALMRSRYSAY +GLIDYLL TWHPST PGELEL P+KW+GLEV +A+ AGD GVVEFVA R +GR RMHE+SRF+R+DGRW YIDG+ Q+ Sbjct: 3 KNALAAHAVCPCDSGKTYADCCGPWHAGLPQGVHAPTPEALMRSRYSAYGLGLIDYLLATWHPSTSPGELELPPLKWLGLEVRHAQAAGDVGVVEFVARYRESGRGGRMHEISRFVREDGRWLYIDGEQQA 133
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: UPI001ADF3D17 (YchJ family metal-binding protein n=1 Tax=Rhodoferax sp. AJA081-3 TaxID=2752316 RepID=UPI001ADF3D17) HSP 1 Score: 194 bits (493), Expect = 1.040e-61 Identity = 87/121 (71.90%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 25 LPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDGQ 387 + CPCGSG CC +WH GL AG APTPEALMRSRYSAY +GLIDYL+ TWHPST PG+LEL PIKW+GLEV +AE +GDAGVVEFVA C+V+GRA+RMHE+SRF+R+ RWYYIDGQ Sbjct: 9 IECPCGSGLDLADCCGQWHKGLAAGVFAPTPEALMRSRYSAYVLGLIDYLIATWHPSTAPGDLELQPIKWLGLEVRHAEESGDAGVVEFVARCKVSGRAERMHELSRFVREQARWYYIDGQ 129
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: A0A2N2SXQ1_9PROT (UPF0225 protein CVU24_14245 n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-18 TaxID=2013709 RepID=A0A2N2SXQ1_9PROT) HSP 1 Score: 192 bits (489), Expect = 4.250e-61 Identity = 86/128 (67.19%), Postives = 102/128 (79.69%), Query Frame = 1 Query: 4 KKALPRYLPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDGQ 387 K AL + CPCGSG+ Y CC RWH GL +G HAP PEALMRSRYSAY +GLIDYLL TWHPST PGEL+L P+KW+GLEV +A+ GDAGVVEFVA R +G+ R+HE+SRF+R+DGRW YIDG+ Sbjct: 3 KNALAAHAACPCGSGQPYGDCCGRWHAGLASGVHAPAPEALMRSRYSAYGLGLIDYLLATWHPSTSPGELDLPPLKWLGLEVRHAQATGDAGVVEFVARYRDSGKGVRLHEISRFVREDGRWLYIDGE 130
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: A0A1Y1R093_9GAMM (UPF0225 protein BWK73_00665 n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1Y1R093_9GAMM) HSP 1 Score: 191 bits (485), Expect = 1.730e-60 Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 1 Query: 28 PCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDG 384 PCPCGSG+ Y CC RWH GL G HAPTPEALMRSRYSAY +G+IDYLL TWHPST PGELEL P+KW+ L++ +AE GDAGVVEF+A R GR R+HE+SRF+R+DGRW YIDG Sbjct: 11 PCPCGSGKPYADCCGRWHTGLSEGMHAPTPEALMRSRYSAYGLGMIDYLLATWHPSTAPGELELPPVKWLELDIRHAEMTGDAGVVEFIARLRDQGRGARLHEISRFVREDGRWLYIDG 129
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: UPI000E0CF0A9 (YchJ family metal-binding protein n=1 Tax=Rhodoferax ferrireducens TaxID=192843 RepID=UPI000E0CF0A9) HSP 1 Score: 191 bits (485), Expect = 1.730e-60 Identity = 89/130 (68.46%), Postives = 98/130 (75.38%), Query Frame = 1 Query: 1 LKKALPRYLP-CPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDGQ 387 +KK P P C CGSG Y ACC WH GL G HAP PEALMRSRYSA+ +G +DYL TWHPST PGEL LSP+KW+GLEV A+ GDAGVVEFVA CR GRAQR+HE SRF+RQ GRWYYIDGQ Sbjct: 1 MKKPPPLSHPACTCGSGRPYAACCGPWHAGLAEGVHAPNPEALMRSRYSAFVLGFVDYLRATWHPSTAPGELALSPVKWLGLEVRRAQVDGDAGVVEFVARCREGGRAQRLHETSRFVRQQGRWYYIDGQ 130
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: Q21RE1_ALBFT (UPF0225 protein Rfer_3964 n=3 Tax=Rhodoferax TaxID=28065 RepID=Q21RE1_ALBFT) HSP 1 Score: 191 bits (484), Expect = 2.700e-60 Identity = 90/129 (69.77%), Postives = 101/129 (78.29%), Query Frame = 1 Query: 1 LKKAL-PRYLPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDG 384 +KK L P CPC SGE Y CC WH GL G +APTPEALMRSRYSAY +GLIDYLL TWHPST PGELEL P+KW+GLE+ +A+ G+AGVVEFVA R NGRA RMHE SRF+R+DGRWYYIDG Sbjct: 1 MKKNLHPARAACPCDSGETYGNCCGPWHAGLADGVYAPTPEALMRSRYSAYVLGLIDYLLATWHPSTSPGELELPPLKWLGLELRHAQATGEAGVVEFVARYRENGRAGRMHETSRFVREDGRWYYIDG 129
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Match: UPI001D09D4A5 (YchJ family protein n=1 Tax=Rhodoferax sp. U2-2l TaxID=2884000 RepID=UPI001D09D4A5) HSP 1 Score: 190 bits (483), Expect = 3.480e-60 Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 31 CPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYAVGLIDYLLQTWHPSTGPGELELSPIKWIGLEVLNAETAGDAGVVEFVALCRVNGRAQRMHEVSRFLRQDGRWYYIDG 384 CPCGSG+ Y ACC +WH G AG HAPTPEALMRSRYSAY +GLIDYLL TWHPST PGELEL P+KW+ L++ +AE GDAGVVEFVA R GR R+HE+SRF+R+DGRW YIDG Sbjct: 12 CPCGSGQTYAACCGQWHAGWRAGLHAPTPEALMRSRYSAYGLGLIDYLLATWHPSTAPGELELPPVKWLELDIRHAEMTGDAGVVEFVARLREQGRGARLHEISRFVREDGRWLYIDG 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12133.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12133.3.1 >prot_P-wetherbeei_contig12133.3.1 ID=prot_P-wetherbeei_contig12133.3.1|Name=mRNA_P-wetherbeei_contig12133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp LKKALPRYLPCPCGSGEAYTACCQRWHDGLEAGNHAPTPEALMRSRYSAYback to top mRNA from alignment at P-wetherbeei_contig12133:1180..1575+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12133.3.1 ID=mRNA_P-wetherbeei_contig12133.3.1|Name=mRNA_P-wetherbeei_contig12133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig12133:1180..1575+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12133:1180..1575+ >mRNA_P-wetherbeei_contig12133.3.1 ID=mRNA_P-wetherbeei_contig12133.3.1|Name=mRNA_P-wetherbeei_contig12133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig12133:1180..1575+ (Phaeothamnion wetherbeei SAG_119_79)back to top |