mRNA_P-wetherbeei_contig1213.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1213.4.1
Unique NamemRNA_P-wetherbeei_contig1213.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: A0A2D7ZVZ8_PSESP (Lysozyme n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A0A2D7ZVZ8_PSESP)

HSP 1 Score: 164 bits (416), Expect = 1.110e-49
Identity = 83/137 (60.58%), Postives = 101/137 (73.72%), Query Frame = 1
Query:   10 LNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALF 420
            ++E GLA+IRQ EGLRL AY  P GIPTIGYG TAGV+LGQ IT E+AE  LR+D+   EA+V   VKVPL   Q+ AL SF FN+G    + STLL+LLN GD++GAA QF +W +A G++L GLV RR AERALF
Sbjct:    3 ISEKGLALIRQFEGLRLSAYRCPAGIPTIGYGSTAGVKLGQAITAERAEQLLREDVRQFEAAVSRLVKVPLTQGQFDALTSFAFNLGAKALEKSTLLRLLNAGDYSGAAAQFERWVYASGKKLAGLVKRRAAERALF 139          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: A0A6G6JMT0_9GAMM (Lysozyme n=15 Tax=Pantoea TaxID=53335 RepID=A0A6G6JMT0_9GAMM)

HSP 1 Score: 160 bits (406), Expect = 3.140e-48
Identity = 78/139 (56.12%), Postives = 102/139 (73.38%), Query Frame = 1
Query:    7 QLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALFL 423
            Q +  G+ +I++ EGL+L+AY D VGIPTIGYGHT  V++G  IT EQA+ +LR+DL  AE ++   VKV L  NQ+ AL SFVFN+G   F  STLLK LN GDFAGAA++F +W +AGG++L GLV RR AER +F+
Sbjct:    2 QTSNKGMDLIKRFEGLKLEAYRDSVGIPTIGYGHTHNVKMGDVITGEQADKFLREDLLVAELTINTNVKVKLTQNQFDALASFVFNLGSGNFVKSTLLKKLNAGDFAGAADEFGKWVNAGGKKLAGLVKRRAAEREVFI 140          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: A0A1D8U3A8_9CYAN (Lysozyme n=3 Tax=Moorena TaxID=1155738 RepID=A0A1D8U3A8_9CYAN)

HSP 1 Score: 160 bits (406), Expect = 4.720e-48
Identity = 82/145 (56.55%), Postives = 107/145 (73.79%), Query Frame = 1
Query:   10 LNESGLAIIRQNEGL-------RLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALFL 423
            +N++GL ++++ EGL       R++AY+DPVGIPTIG+GHTAGV++G  IT EQAE  LR DL  +E++V N VKV L DN++SALVSFVFNIG   F+ STLL+ LNQG+  GAA +F +W   GG+ L GL  RR+AER LFL
Sbjct:    9 INQAGLDLVKEFEGLHKRCPDGRVEAYIDPVGIPTIGWGHTAGVRIGDMITVEQAEKLLRQDLESSESTVSNLVKVSLTDNEFSALVSFVFNIGPTAFRRSTLLRKLNQGNDQGAANEFLRWNKGGGRVLLGLSKRREAERKLFL 153          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: UPI0016868BF3 (lysozyme n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI0016868BF3)

HSP 1 Score: 164 bits (414), Expect = 6.060e-48
Identity = 80/139 (57.55%), Postives = 105/139 (75.54%), Query Frame = 1
Query:    7 QLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALFL 423
            ++N++GL +I+Q EGL+L+AY+ P G+PTIGYG TAGV++G  IT EQAE  LR D+   E +V N VKVPL +NQ+SALVSF +N+G    Q STLLKLLNQG++  AA++F +W  A G+ L GL  RRQAE+ALFL
Sbjct:  116 KINQAGLDLIKQFEGLKLEAYICPAGVPTIGYGTTAGVKMGDRITAEQAEVLLRKDVEKFERAVVNAVKVPLTENQFSALVSFTYNLGAGALQKSTLLKLLNQGNYEAAAQEFPKWNKAAGKVLTGLTRRRQAEQALFL 254          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: A0A5M7LH93_9GAMM (Lysozyme n=1 Tax=Pantoea sp. VH_25 TaxID=2608045 RepID=A0A5M7LH93_9GAMM)

HSP 1 Score: 160 bits (404), Expect = 6.330e-48
Identity = 77/137 (56.20%), Postives = 105/137 (76.64%), Query Frame = 1
Query:   13 NESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALFL 423
            +++GL +I+Q E L+ +AYL P GIPTIGYGHT GV +G   TT+QA+++L++D   AE ++   VKVPL+ +Q+ ALVSF+FN+G   F  STLLK LN GD+AGAAE+F +W +AGG++L GLV RR AE+ALFL
Sbjct:    4 SQTGLDLIKQFETLKTNAYLCPAGIPTIGYGHTHGVSMGDKCTTQQADAWLQEDCLVAELTIGANVKVPLSQSQFDALVSFIFNLGSGNFAGSTLLKKLNVGDYAGAAEEFGKWVNAGGRKLGGLVKRRAAEKALFL 140          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: W9T4C2_9PSED (Lysozyme n=1 Tax=Pseudomonas sp. BAY1663 TaxID=1439940 RepID=W9T4C2_9PSED)

HSP 1 Score: 160 bits (404), Expect = 6.740e-48
Identity = 81/138 (58.70%), Postives = 100/138 (72.46%), Query Frame = 1
Query:    7 QLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALF 420
            Q ++ G+ +I++ EGLRL AY D  GIPTIGYGHT GV+ G  IT +QA  +LR+DL GAE  V+  V V L  +Q+ AL S VFNIGG  F+DSTLL+ LN GD+AGAA QF +W H GG+ LPGLV RR AERA+F
Sbjct:    2 QTSQRGIDLIKRFEGLRLRAYDDGAGIPTIGYGHTKGVKPGMTITADQAVQFLREDLHGAERDVERYVTVHLCQHQFDALASLVFNIGGTAFRDSTLLRKLNAGDYAGAAVQFDRWVHGGGKILPGLVKRRAAERAMF 139          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: UPI000640BA4A (lysozyme n=1 Tax=Chromobacterium subtsugae TaxID=251747 RepID=UPI000640BA4A)

HSP 1 Score: 160 bits (404), Expect = 7.400e-48
Identity = 83/139 (59.71%), Postives = 102/139 (73.38%), Query Frame = 1
Query:    7 QLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHT-AGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALF 420
            Q+N +GL +I+Q EGLRL AY D VG+ TIGYGHT A V+ GQ I+  QAE  L++DL   E  V  +VK PLN NQ+SALVSF +N+G    Q STLL+LLNQGD+AGAA QF +W  AGGQ+LPGL+ RR AE+ LF
Sbjct:    2 QINTAGLNLIKQFEGLRLQAYQDAVGVWTIGYGHTGADVRAGQTISQTQAEQLLQNDLTRFETGVTGQVKTPLNGNQFSALVSFSYNLGLGNLQSSTLLRLLNQGDYAGAAAQFPRWDRAGGQQLPGLLKRRLAEQTLF 140          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: H3R8Z1_PANSE (Lysozyme n=7 Tax=Pantoea TaxID=53335 RepID=H3R8Z1_PANSE)

HSP 1 Score: 159 bits (402), Expect = 1.280e-47
Identity = 76/139 (54.68%), Postives = 104/139 (74.82%), Query Frame = 1
Query:    7 QLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALFL 423
            +++ +G+ +I++ EGL ++AY D V IPTIGYGHT GV++G  IT EQA+++LR+DL  AE ++   VKV L  NQ+ AL SFVFN+G   F  STLLK LN GD+AGAA++F +W +AGG++L GLV RR AER +FL
Sbjct:    2 KVSNNGINLIKRFEGLEIEAYRDSVNIPTIGYGHTRGVKMGDVITGEQADAFLREDLQVAELTINTNVKVKLTQNQFDALTSFVFNLGSGNFVKSTLLKKLNLGDYAGAADEFGRWVNAGGKQLAGLVKRRAAEREVFL 140          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: A0A3N2EKB3_9ENTR (Lysozyme n=2 Tax=unclassified Enterobacter TaxID=2608935 RepID=A0A3N2EKB3_9ENTR)

HSP 1 Score: 159 bits (402), Expect = 1.360e-47
Identity = 78/139 (56.12%), Postives = 101/139 (72.66%), Query Frame = 1
Query:    7 QLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALFL 423
            ++ + GL +I+Q+EGL+L+AYL P  + TIGYGHT GVQ G  I  +QAESYLR DL  +E +V++ V V L  NQ+ ALVSF FN+G      STLLK LN  D+AGAA++F +W H+GG++LPGL  RRQAER LFL
Sbjct:    2 KIGDKGLELIKQSEGLQLEAYLCPARVWTIGYGHTKGVQSGDVINEDQAESYLRQDLGESERAVEHGVTVSLTQNQFDALVSFTFNLGAGNLFSSTLLKKLNAEDYAGAADEFLRWDHSGGKQLPGLTRRRQAERQLFL 140          
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Match: UPI00157A54BD (lysozyme n=1 Tax=Azospirillum baldaniorum TaxID=1064539 RepID=UPI00157A54BD)

HSP 1 Score: 158 bits (400), Expect = 4.100e-47
Identity = 85/142 (59.86%), Postives = 100/142 (70.42%), Query Frame = 1
Query:    7 QLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQAESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLLKLLNQGDFAGAAEQFAQWTHAG----GQELPGLVNRRQAERALF 420
            +++   LA++R  EGL L AYL P G+PTIGYGHTAGV++GQ IT+ QAE YLR D+A A A+V   VKVPL D Q  AL SFVFN+G    Q STLL+LLNQGD+AGAA QF +W  A      Q L GLV RR AERALF
Sbjct:   12 EIHPDALALVRHFEGLYLKAYLCPAGVPTIGYGHTAGVRMGQTITSLQAEVYLRADMAEAAAAVDQLVKVPLTDQQRGALASFVFNLGAGSLQSSTLLRLLNQGDYAGAAGQFGRWVFATVKGKKQVLDGLVKRRAAERALF 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1213.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7ZVZ8_PSESP1.110e-4960.58Lysozyme n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A... [more]
A0A6G6JMT0_9GAMM3.140e-4856.12Lysozyme n=15 Tax=Pantoea TaxID=53335 RepID=A0A6G6... [more]
A0A1D8U3A8_9CYAN4.720e-4856.55Lysozyme n=3 Tax=Moorena TaxID=1155738 RepID=A0A1D... [more]
UPI0016868BF36.060e-4857.55lysozyme n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID... [more]
A0A5M7LH93_9GAMM6.330e-4856.20Lysozyme n=1 Tax=Pantoea sp. VH_25 TaxID=2608045 R... [more]
W9T4C2_9PSED6.740e-4858.70Lysozyme n=1 Tax=Pseudomonas sp. BAY1663 TaxID=143... [more]
UPI000640BA4A7.400e-4859.71lysozyme n=1 Tax=Chromobacterium subtsugae TaxID=2... [more]
H3R8Z1_PANSE1.280e-4754.68Lysozyme n=7 Tax=Pantoea TaxID=53335 RepID=H3R8Z1_... [more]
A0A3N2EKB3_9ENTR1.360e-4756.12Lysozyme n=2 Tax=unclassified Enterobacter TaxID=2... [more]
UPI00157A54BD4.100e-4759.86lysozyme n=1 Tax=Azospirillum baldaniorum TaxID=10... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1213contigP-wetherbeei_contig1213:6132..6554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1439940.BAY1663_02362
Preferred nameybcS
PFAMsPhage_lysozyme
Model size423
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K01185
Hectar predicted targeting categoryother localisation
GOsGO:0001906,GO:0001907,GO:0003674,GO:0003796,GO:0003824,GO:0004553,GO:0008150,GO:0016032,GO:0016787,GO:0016798,GO:0019048,GO:0019058,GO:0019076,GO:0031640,GO:0035821,GO:0035890,GO:0035891,GO:0039633,GO:0040011,GO:0044003,GO:0044004,GO:0044364,GO:0044403,GO:0044419,GO:0044659,GO:0044661,GO:0051701,GO:0051704,GO:0051817,GO:0051818,GO:0051883,GO:0052126,GO:0052192,GO:0061783
Exons1
Evalue1.11e-48
EggNOG OGsCOG3772@1|root,COG3772@2|Bacteria,1MZJD@1224|Proteobacteria,1S6BA@1236|Gammaproteobacteria
EC3.2.1.17
Descriptionlysozyme
Cds size423
COG categoryG
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185938.6305478-CDS-P-wetherbeei_contig1213:6131..65541683185938.6305478-CDS-P-wetherbeei_contig1213:6131..6554Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1213 6132..6554 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1213.4.1prot_P-wetherbeei_contig1213.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1213 6132..6554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1213.4.1

>prot_P-wetherbeei_contig1213.4.1 ID=prot_P-wetherbeei_contig1213.4.1|Name=mRNA_P-wetherbeei_contig1213.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp
MAQLNESGLAIIRQNEGLRLDAYLDPVGIPTIGYGHTAGVQLGQHITTEQ
AESYLRDDLAGAEASVQNEVKVPLNDNQYSALVSFVFNIGGPQFQDSTLL
KLLNQGDFAGAAEQFAQWTHAGGQELPGLVNRRQAERALFL
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mRNA from alignment at P-wetherbeei_contig1213:6132..6554+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1213.4.1 ID=mRNA_P-wetherbeei_contig1213.4.1|Name=mRNA_P-wetherbeei_contig1213.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig1213:6132..6554+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCACAGCTCAATGAATCGGGCCTGGCCATCATCCGCCAGAACGAAGG CCTACGCCTGGATGCCTACCTCGATCCTGTCGGCATCCCCACCATTGGCT ACGGCCACACCGCCGGCGTCCAACTCGGCCAGCACATCACCACAGAACAA GCCGAAAGCTATCTGCGTGACGACCTGGCCGGCGCTGAAGCCAGCGTGCA AAACGAAGTCAAAGTCCCCCTCAACGACAACCAGTATTCCGCCCTGGTCT CCTTCGTCTTCAACATCGGAGGCCCCCAATTCCAGGATTCGACCCTCCTC AAGCTCCTCAACCAGGGAGACTTCGCGGGAGCCGCCGAGCAGTTCGCTCA ATGGACTCACGCCGGCGGCCAAGAACTCCCCGGCCTCGTCAATCGGCGCC AGGCCGAACGCGCGCTCTTCCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1213:6132..6554+

>mRNA_P-wetherbeei_contig1213.4.1 ID=mRNA_P-wetherbeei_contig1213.4.1|Name=mRNA_P-wetherbeei_contig1213.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig1213:6132..6554+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCACAGCTCAATGAATCGGGCCTGGCCATCATCCGCCAGAACGAAGG
CCTACGCCTGGATGCCTACCTCGATCCTGTCGGCATCCCCACCATTGGCT
ACGGCCACACCGCCGGCGTCCAACTCGGCCAGCACATCACCACAGAACAA
GCCGAAAGCTATCTGCGTGACGACCTGGCCGGCGCTGAAGCCAGCGTGCA
AAACGAAGTCAAAGTCCCCCTCAACGACAACCAGTATTCCGCCCTGGTCT
CCTTCGTCTTCAACATCGGAGGCCCCCAATTCCAGGATTCGACCCTCCTC
AAGCTCCTCAACCAGGGAGACTTCGCGGGAGCCGCCGAGCAGTTCGCTCA
ATGGACTCACGCCGGCGGCCAAGAACTCCCCGGCCTCGTCAATCGGCGCC
AGGCCGAACGCGCGCTCTTCCTC
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