mRNA_P-wetherbeei_contig1213.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A564Q3K0_9EURY (Putative tyrosine recombinase XerC-like protein n=1 Tax=Candidatus Methanolliviera sp. GoM_asphalt TaxID=2588692 RepID=A0A564Q3K0_9EURY) HSP 1 Score: 175 bits (444), Expect = 1.130e-51 Identity = 95/191 (49.74%), Postives = 132/191 (69.11%), Query Frame = 1 Query: 13 KKTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQG----DQGPEAVVFDLSDRQIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVAVHRSLEQYEQHHQLS 573 K LPA TREE ++LL A + PR+RLI+R LYATGIR+ EL LKF DI Y+ Q++FIR+GKG KDRYV AD++T +LK+WQ D+ E V + RQI R+V + G TG++QKY AM+R S HSFRHA+ATH +ENG+ LF +K+L+GH +L+ TE YI + ++ ++Y++ + LS Sbjct: 61 KHKLPAILTREECKKLLNA-FKKGKKAPRNRLIIRLLYATGIRIEELANLKFCDIFYDNQTIFIREGKGKKDRYVCADLKTFELLKKWQEAGQEDKPLEDSVPGIKIRQIRRIVEKAGDITGISQKYDAMNRIYSAHSFRHAFATHLFENGMSLFAIKKLLGHEFLETTEIYINCTIEQARKEYKETNPLS 250
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A7J2IPS7_9ARCH (Tyrosine recombinase XerA n=3 Tax=Archaea TaxID=2157 RepID=A0A7J2IPS7_9ARCH) HSP 1 Score: 121 bits (303), Expect = 2.790e-30 Identity = 65/171 (38.01%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 16 KTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQGPEAVVFDLSDRQIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVA 528 K LP TREE+ +LLEA RD+L++RTLY+TG+R++ELC LK+ DI+ + +R GKG K+R VL D +T+ +LK+++ VF +S R ++R++ + + G+ +K +PH+ RH+ ATH E GVD+ ++ L+GH+ L T+ Y V+ Sbjct: 107 KRLPTALTREEVEKLLEAAE-----NDRDKLVVRTLYSTGVRVSELCNLKWDDIDLNSGEVRVR-GKGNKERIVLMDAETLNLLKKYREKHSSSEKVFPVSPRTVQRIIKKLAEKAGIRKK-------CTPHTLRHSLATHLLERGVDIRIIQELLGHSSLSTTQIYTHVS 264
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A7J2LYG7_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Korarchaeota archaeon TaxID=2056630 RepID=A0A7J2LYG7_9ARCH) HSP 1 Score: 120 bits (302), Expect = 3.590e-30 Identity = 68/183 (37.16%), Postives = 102/183 (55.74%), Query Frame = 1 Query: 7 RAKKTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQG-PEAVVFDLSDRQIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVAVHRSLEQY 552 R ++ LP+ TREE+ +L+E+ RDRLILRTLY TG+R++ELC L + +N E + +R GKG KDR VL D T +L + G VF +S R ++R+V + G+ +K ++PH+ RH+ ATH E G D+ ++ L+GHA L T+ Y V+ +Y Sbjct: 99 RVRRALPSVLTREEVEKLIESAE-----DERDRLILRTLYVTGMRVSELCELTWDRVNLEDGVILVRSGKGGKDRVVLIDADTTKLLADLKASSGNSNGRVFPVSPRTVQRIVKAAAKRAGINKK-------VTPHTLRHSLATHLLEAGADIRAIQELLGHASLSTTQIYTHVSTRHLKREY 269
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A525C2T1_9DELT (Tyrosine recombinase XerC n=1 Tax=Desulfovibrio sp. TaxID=885 RepID=A0A525C2T1_9DELT) HSP 1 Score: 112 bits (280), Expect = 9.020e-27 Identity = 76/198 (38.38%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 16 KTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIR-DGKGAKDRYVLADVQT----MAMLKQWQGDQGP-EAVVF------DLSDRQIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVAVHRSLEQYEQHHQLS 573 KTLP T EE+ +L P LT + G RDR +L LYA G+R++EL LK ++++ + IR GKG K+R V A Q M L W+G P E VF L+ + + +LV +Y + G+ ++ +SPHSFRH++ATH E G DL T++ L+GHA +D TE Y + R + + QHH S Sbjct: 100 KTLPQVLTPEEVSAILLQPKLTTKLGYRDRAMLELLYAAGLRVSELVNLK--PLDFDAHTGLIRVHGKGGKERIVPAHPQAQDFLMEYLNSWRGQFAPVEEFVFLNRSGKGLTRQAVFKLVKRYTAEAGIVKE-------VSPHSFRHSFATHLLEGGADLRTVQVLLGHAVIDTTEIYTHLQGKRLADIHRQHHPRS 288
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: UPI00054F83CD (tyrosine-type recombinase/integrase n=4 Tax=Arenibacter TaxID=178469 RepID=UPI00054F83CD) HSP 1 Score: 110 bits (276), Expect = 1.460e-26 Identity = 64/176 (36.36%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 16 KTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQGPEAVVFDLSDR-----QIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVA 528 K LP + E+RQLL+AP L + RL+L LY G+R ELC L+ D++++ + L IR GKG KDRYV + LK++ + P F+ DR Q+ + Q+ + +K++ + +G++PH RH+YATH E G+D+ ++K L+GHA++ T Y+ VA Sbjct: 66 KKLPVVLSHNEVRQLLKAPRLL-----KHRLVLAMLYGCGLRNFELCNLQLNDLDFDRRMLHIRQGKGRKDRYVPLSQMQIRGLKKYIAAEHPANWCFNGYDRKGNPSQLSTMGVQWIVREA--RKHSGIQKGITPHILRHSYATHLLEMGLDIISVKDLLGHAHIQTTLTYLHVA 234
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A2U1AFI5_9BACT (Phage integrase family protein n=1 Tax=Pontibacter virosus TaxID=1765052 RepID=A0A2U1AFI5_9BACT) HSP 1 Score: 107 bits (268), Expect = 7.810e-26 Identity = 64/182 (35.16%), Postives = 106/182 (58.24%), Query Frame = 1 Query: 4 LRAKKTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQGPEAVVFDLSDRQIE-----RLVTQYGTQTGLTQ--KYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVA 528 LR + LP ++ E+++LL AP L + RL+L TLY G+R +E C LK +D++++ + L +R GKG KDRYV + L+++ + P+ +F+ ++ E R T G Q + + K A + + L+PH+ RH YATH E+G+D+ +++ L+GHA +D T Y+ VA Sbjct: 14 LRREGKLPVVLSKPEVKRLLSAPKLL-----KHRLLLATLYGCGLRCSEACNLKLSDVDFDRRMLHVRRGKGGKDRYVPLSGHLVRGLEKYIQAECPQQWLFNGQVQENEQGLRDRRYTTAGVQWVVREARKAAGIAKQLTPHTLRHTYATHLLEDGLDIVSIRDLLGHACIDTTMVYLHVA 190
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A5B1CSA3_9BACT (Tyrosine recombinase XerC n=1 Tax=Rubripirellula obstinata TaxID=406547 RepID=A0A5B1CSA3_9BACT) HSP 1 Score: 112 bits (279), Expect = 1.610e-25 Identity = 70/191 (36.65%), Postives = 105/191 (54.97%), Query Frame = 1 Query: 7 RAKKTLPATPTREEIRQLLEA-PSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQGPEAVVF------------DLSDRQIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVAVHRS 540 R K+ P P+R+E+R+LL A PSL RD L+L +Y TG+R++E+C +++ D++ + Q +FI+ GKG DR+V Q + K VF LS R ++RLV G+T+K L+PHS RHA+ATH YE+G D+ +++++GH LD T YI VA R+ Sbjct: 138 RKKRHRPVVPSRDEVRRLLAAAPSL------RDTLLLGLMYGTGMRVSEVCQVRWRDVDVDRQQIFIKQGKGNADRHVQLPQQYQDLFKSLLKRSQRNEFVFAGESQSDRRQNRHLSPRTVQRLVKTATKIAGITKK-------LTPHSLRHAFATHSYEDGCDIRRIQKVLGHVRLDTTTIYISVAKERT 315
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A1E4FQ19_9BACT (Uncharacterized protein n=2 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4FQ19_9BACT) HSP 1 Score: 110 bits (276), Expect = 1.990e-25 Identity = 54/141 (38.30%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 97 RDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQGPEAVVFDLSDRQIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYI 519 R+ L+ R YA+ +R++ L + DI Y+ + +F+R KG D Y L D T ML+ +Q + VF+L RQ+ RL+T+ G ++GL + + R +SPH FRHA+ATH YE G+D+ +++L+GH+ L T +Y+ Sbjct: 247 RELLLGRLFYASAMRVSSAAELCYLDIFYDERRVFLRAAKGDVDLYALIDPGTAEMLRMYQDREPISDSVFELGTRQMNRLITEMGVRSGLQAQAQPLGRSVSPHCFRHAFATHCYEAGMDIREIQKLLGHSSLATTNDYV 387
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A1G0ZMH2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Lentisphaerae bacterium RIFOXYA12_FULL_48_11 TaxID=1798578 RepID=A0A1G0ZMH2_9BACT) HSP 1 Score: 108 bits (271), Expect = 3.170e-25 Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 16 KTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQGPEAVVFDLSDRQI------ERLVTQY-GTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVAV 531 ++LP T EE+ +L P +TD G RDR IL T YATGIR EL L+ D+++E L IR GKG KDR V + + ++ P + F+++ R + ER Y GT T + A + R S H FRH+ ATH ENG D+ +++L+GHAYL+ T+ Y EV + Sbjct: 136 RSLPKALTIEEVNMVLNIPDITDPLGIRDRAILETFYATGIRRRELIQLELEDLDHERGILLIRRGKGGKDRVVPLGESALHWILRYLEKTRP-VLDFNMNQRTLFLTGYGERFSPGYIGTLVRETLRKARIFREGSCHLFRHSCATHMLENGADIRYIQQLLGHAYLNTTQIYTEVDI 313
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Match: A0A2G9PK61_9ARCH (Integrase n=4 Tax=Candidatus Woesearchaeota TaxID=1801616 RepID=A0A2G9PK61_9ARCH) HSP 1 Score: 107 bits (268), Expect = 3.660e-25 Identity = 63/180 (35.00%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 7 RAKKTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAELCALKFADINYEGQSLFIRDGKGAKDRYVLADVQTMAMLKQWQGDQGPEAVVF------DLSDRQIERLVTQYGTQTGLTQKYAAMDRGLSPHSFRHAYATHFYENGVDLFTLKRLMGHAYLDVTENYIEVA 528 +++K LPA +++E+R L+ A S T+++ RLI+ TLY+TGIRL+E L+ +D+ + ++R GKG+KDR ++ + + L+ + G+ ++ VF LS R I+ +V + + G+ +K +SPH+ RH++ATH ENGVD+ ++ L+GHA L T+ Y +V+ Sbjct: 94 KSEKKLPAVLSKDEVRALI-ANSPTEKS----RLIIETLYSTGIRLSECIMLRISDLELNERIGWVRKGKGSKDRLIILSERLVEHLRHYVGECPEQSFVFPSRSGSQLSSRNIQGIVKRAALRAGIKKK-------VSPHTLRHSFATHLLENGVDIRRIQELLGHANLQTTQIYTKVS 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1213.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1213.1.1 >prot_P-wetherbeei_contig1213.1.1 ID=prot_P-wetherbeei_contig1213.1.1|Name=mRNA_P-wetherbeei_contig1213.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp MLRAKKTLPATPTREEIRQLLEAPSLTDRTGPRDRLILRTLYATGIRLAEback to top mRNA from alignment at P-wetherbeei_contig1213:728..1300+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1213.1.1 ID=mRNA_P-wetherbeei_contig1213.1.1|Name=mRNA_P-wetherbeei_contig1213.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig1213:728..1300+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1213:728..1300+ >mRNA_P-wetherbeei_contig1213.1.1 ID=mRNA_P-wetherbeei_contig1213.1.1|Name=mRNA_P-wetherbeei_contig1213.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig1213:728..1300+ (Phaeothamnion wetherbeei SAG_119_79)back to top |