mRNA_P-wetherbeei_contig12108.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12108.1.1
Unique NamemRNA_P-wetherbeei_contig12108.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: A0A3B9A053_9DELT (Class I SAM-dependent methyltransferase n=3 Tax=Desulfuromonadales TaxID=69541 RepID=A0A3B9A053_9DELT)

HSP 1 Score: 301 bits (772), Expect = 5.400e-100
Identity = 157/263 (59.70%), Postives = 181/263 (68.82%), Query Frame = 1
Query:    1 QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFER 789
            QFDFG+NW EFS+  LS EKVAQARA F  LMA     L  ++F+DIGFGQGL LL A ++GARV G DINP C +V+ RNRA      R P   VVGSILDP  + RL         F++VHSWGVLHHTGRM+ AIDNA  LV   G LVLA+YNRHW+S  WL IK  Y   P  L+K M+A  +PVI  AK+ VTG+NP  M RGMDFYY+VVDWVGGYPYEYAS+ E+  YL  KGF L   +PA VPTGCNEF F R
Sbjct:    2 QFDFGQNWQEFSEKRLSSEKVAQARAHFDELMAEV--PLADKTFLDIGFGQGLSLLLAHQAGARVTGIDINPKCAEVVARNRAVV--GVREPIEAVVGSILDPEGLARLAGRT-----FDVVHSWGVLHHTGRMYQAIDNACDLVVADGTLVLAIYNRHWSSRPWLAIKWTYCVLPAFLQKLMIAAFYPVIMVAKFLVTGKNPFGMTRGMDFYYNVVDWVGGYPYEYASMHEMETYLSGKGFQLHKAIPARVPTGCNEFVFVR 255          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: UPI001D09A42E (class I SAM-dependent methyltransferase n=1 Tax=Microvirga rosea TaxID=2715425 RepID=UPI001D09A42E)

HSP 1 Score: 293 bits (751), Expect = 1.050e-96
Identity = 153/268 (57.09%), Postives = 184/268 (68.66%), Query Frame = 1
Query:    1 QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELP--GRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLD--LAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFERT 792
            QFDFG+NW  FS+ AL+  KV QAR  F +L+     E+P  GRSFVDIGFGQGL LL A E+GAR  GCDINP CE+ L      F GD +    +V+GS+L+  TV +L +  +     G+++VHSWGVLHHTG M  AI NAASLV PGG  VLA+YNRHWTS  WLLIK +Y  SP  L+K +V  L+PVI+AAK AVTGR+P    RGMDFYY+VVDWVGGYPYEY S +E+   + A GF   A   A VPTGCNEF F R+
Sbjct:    2 QFDFGKNWLNFSNSALNARKVEQARDDFRKLLG----EIPLKGRSFVDIGFGQGLSLLLATEAGARAVGCDINPRCEEALNATSQFFDGDLKTQVSLVIGSVLESETVRQLREHPVVAGNGGYDVVHSWGVLHHTGDMKRAIANAASLVAPGGYFVLAIYNRHWTSLPWLLIKWLYCKSPAWLQKLLVGALYPVIWAAKLAVTGRSPGRQTRGMDFYYNVVDWVGGYPYEYGSRDEIKRMVGALGFQCTAEYAAEVPTGCNEFVFRRS 265          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: UPI001CCD6ACF (class I SAM-dependent methyltransferase n=1 Tax=Microvirga sp. WGZ8 TaxID=2876078 RepID=UPI001CCD6ACF)

HSP 1 Score: 290 bits (743), Expect = 1.460e-95
Identity = 151/267 (56.55%), Postives = 182/267 (68.16%), Query Frame = 1
Query:    1 QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLD--LAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFERTA 795
            QFDFG+NW  +S   LS +KV QAR  F  L+A  G EL  +SF+DIGFGQGL LL A E+GA+V GCDINP C + L      F GD +    VV+GSILD  T   L    +A    G++IVHSWGVLHHTGRM  AI NAASLVRPGG +V+A+YNRHW+S  WL IK +Y  +P  ++K ++A L+PVI+ AK  VTGR P    RGMDFYY+VVDWVGGYPYEY S +E+   +   GF   A +PA VPTGCNEF F RTA
Sbjct:    2 QFDFGKNWLSYSSTVLSTKKVVQAREDFRHLLA--GIELREKSFLDIGFGQGLSLLLATEAGAKVVGCDINPRCAEALAVTSKFFEGDPKSRISVVIGSILDDHTREALRQHPVAQPDGGYDIVHSWGVLHHTGRMDLAIKNAASLVRPGGHIVIAIYNRHWSSRPWLFIKWLYCSAPSWMQKFLIAALYPVIWLAKLIVTGRAPTRQTRGMDFYYNVVDWVGGYPYEYGSRDEMKRMVGTLGFECIAEIPAEVPTGCNEFVFRRTA 266          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: UPI00131BDEC2 (class I SAM-dependent methyltransferase n=1 Tax=Lysobacter panacisoli TaxID=1255263 RepID=UPI00131BDEC2)

HSP 1 Score: 289 bits (739), Expect = 5.150e-95
Identity = 151/264 (57.20%), Postives = 180/264 (68.18%), Query Frame = 1
Query:    4 FDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDL--APDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFER 789
            FDFG+NW EFS+ AL+ E+  QARA F++LM   G  L  R+F+DIGFGQGL LL A E GA+V G DINP C  V   NR      A     + VGSILD    G+ LD+  A  P G+++VHSWGVLHHTGRMW AI+NAASLVRPGG LV+A+YNRHW+S  WL IKR+YV  P++L+  M  +  PVI+ AK  VTGRNP  M+RGMDFYY+VVDWVGGYPYEYAS  E+  +    GFT        VP GCNEF F R
Sbjct:    6 FDFGQNWKEFSEQALTEERFQQARADFSKLME--GIPLKDRTFIDIGFGQGLSLLCAIEHGAKVHGLDINPKCRDVFVANRERL-NVAGADAEIAVGSILD----GQPLDVVRAWQPGGYDVVHSWGVLHHTGRMWQAIENAASLVRPGGHLVIAIYNRHWSSLPWLAIKRLYVALPKVLQSLMNRLFVPVIYVAKLLVTGRNPLKMERGMDFYYNVVDWVGGYPYEYASRNEIETHASRLGFTPVNFTRTIVPIGCNEFVFRR 262          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: A0A2N2KDI3_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15 TaxID=2013742 RepID=A0A2N2KDI3_9DELT)

HSP 1 Score: 285 bits (729), Expect = 2.290e-93
Identity = 150/261 (57.47%), Postives = 176/261 (67.43%), Query Frame = 1
Query:    1 QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAF 783
            QFDFG NW EFS  A++PEKV QAR  FA  M   G +L  + F+DIGFGQGL LL AAE GARV GCDIN  C + L  + A FP     P  V+VGSIL    V  L    P  SG+ IVHSWGVLHHTG MW A+  AASLVR  G L LA+YNRH TSPAWL IK IY  +P+ +R+AMV   FP+IF AKWA TGR+PR  +RGMDFY++V+DW+GGYPYEYA  +EV +  +  GF      PA V TGCN+F F
Sbjct:   10 QFDFGRNWLEFSQKAMTPEKVRQAREDFAWYMK--GIDLSRKWFLDIGFGQGLSLLLAAEMGARVVGCDINAQCIKALTNSAAFFPDARVDPADVLVGSILQKEVVESLRSRTPGCSGYHIVHSWGVLHHTGDMWSALKIAASLVRNQGYLALAIYNRHVTSPAWLHIKWIYNIAPKPVRRAMVLFFFPLIFFAKWASTGRDPRIQERGMDFYFNVIDWIGGYPYEYARSDEVIHRTELLGFKCIRLKPAGVSTGCNQFLF 268          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: A0A3M1UMR0_9EURY (Class I SAM-dependent methyltransferase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A3M1UMR0_9EURY)

HSP 1 Score: 282 bits (722), Expect = 1.890e-92
Identity = 141/263 (53.61%), Postives = 184/263 (69.96%), Query Frame = 1
Query:    1 QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFER 789
            QFDFG+NW EFS+  L+ E++AQA   F  L++  G  L  + F+D+GFGQGL LL A ++GA V+G D+NP C  V+E+N+     D   P  + VGSILD   V  L       + F++VHSWGVLHHTG MW AIDN  SLVR GG L++A+YN+HW+SP W +IK IY  SP  ++KA++ + FPVIF AK+ VTG+NP  M RGMDF+Y+VVDWVGGYPYEYAS EE+ +Y+ +KG+ L    P+ VPTGCNE+ F R
Sbjct:    2 QFDFGKNWKEFSEKKLTSERIAQAETHFHELLS--GVNLKEKRFLDVGFGQGLSLLLAHKAGAVVSGIDVNPTCYDVVEKNKQEMGID--EPIDIRVGSILDDEIVKDL-----KKNMFDVVHSWGVLHHTGSMWVAIDNVCSLVRDGGFLIIAIYNKHWSSPLWKMIKLIYCKSPSFVQKALIWLFFPVIFFAKFLVTGKNPLKMKRGMDFFYNVVDWVGGYPYEYASPEEIISYVSSKGYRLVRISPSCVPTGCNEYIFCR 255          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: A0A090ACN8_9GAMM (3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090ACN8_9GAMM)

HSP 1 Score: 275 bits (702), Expect = 2.410e-89
Identity = 137/262 (52.29%), Postives = 178/262 (67.94%), Query Frame = 1
Query:    4 FDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFER 789
            FDFG+NW +FS +AL+  KV QA   FA+L A  G EL G++F+DIGFGQGL LL A ++GA V GC+INP C++ LE+   HFP       P+V+GSIL+  TV +LL  + +  G +IVHSWGVLHHTG M  A  + A LV+  G LV+A+YN+HW+S  WL+IK +Y   P LL+  +V + +P+I+ AK+ VT  NP    RGMDF YDV+DWVGGYPYEYAS+EE+   +   GF     V A VPTGCNEF F +
Sbjct:    3 FDFGKNWLDFSKNALTSAKVKQAENDFAKLFA--GIELTGKTFIDIGFGQGLSLLIARQNGATVVGCEINPTCKEALEQTLIHFPHVKSTDIPIVIGSILNQDTVNQLLKYSNN-QGVDIVHSWGVLHHTGNMRQAFQSVAKLVKEDGYLVIAIYNKHWSSYIWLIIKWLYCKLPSLLQSGLVYLFYPIIWLAKYLVTRENPTKKTRGMDFLYDVIDWVGGYPYEYASIEEIEKLMMNLGFQKLKHVKAQVPTGCNEFIFRK 261          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: A7BXQ0_9GAMM (3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BXQ0_9GAMM)

HSP 1 Score: 265 bits (676), Expect = 5.990e-86
Identity = 126/228 (55.26%), Postives = 165/228 (72.37%), Query Frame = 1
Query:  106 GAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFER 789
            G EL G++FVDIGFGQGL LL A + GA V GCDINP CE+ LE+  +HFP       P+V+GSI++  T+ +LL+ + +  GF+IVHSWGVL  TG M  +I N ASLV+PGG L +++YNRHWTSP WL +K +Y  SP+L +KAM+   +P+I+ AK+ VTG  P +  RGMDF+YDVVDWVGGYPYEYAS  E+ + ++  GF L   VPA VPTGCNEF +++
Sbjct:    2 GLELQGKTFVDIGFGQGLSLLIAKQKGASVVGCDINPTCEKALEQTMSHFPQYQVSDIPLVIGSIINQDTINQLLEHSEN-QGFDIVHSWGVLCLTGSMQKSIQNTASLVKPGGYLAISIYNRHWTSPIWLAVKWLYCKSPKLFQKAMIYFFYPIIWLAKYLVTGEKPANKSRGMDFFYDVVDWVGGYPYEYASKGEIVHLIEPLGFELIHFVPAQVPTGCNEFIWKK 228          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: A0A0S6VRR0_9BACT (3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Candidatus Moduliflexus flocculans TaxID=1499966 RepID=A0A0S6VRR0_9BACT)

HSP 1 Score: 245 bits (625), Expect = 1.080e-77
Identity = 126/263 (47.91%), Postives = 168/263 (63.88%), Query Frame = 1
Query:    1 QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAFER 789
            QF FG NW ++ ++AL+PEK+ QAR AF +L    G     R+F+DIGFGQGL L  A E GA+V G DI+      L++    F      P+ +   SILD   V  L         F+IVHSWGVLHHTG MW AI NAA LV+P G  +L++YN+HW+SP W LIK  Y ++P + ++  V + +P+I+  K+ VTG+NP+   RGMDF+YDVVDWVGGYPYEYAS E V N++   GF     +PA +PT CN+F F++
Sbjct:    5 QFAFGRNWQQYVEYALTPEKIEQARQAFRQLCD--GVAFQDRTFLDIGFGQGLALCLAHEMGAKVLGIDIDNENVPSLQKTLTAFNFSCSPPYRIA--SILDDNLVEELRHRGE----FDIVHSWGVLHHTGDMWQAICNAARLVKPDGVFILSIYNQHWSSPLWRLIKWSYNHAPCVAQRLFVLLFYPIIYLTKFLVTGQNPKHKQRGMDFFYDVVDWVGGYPYEYASAEAVCNFICRLGFDTVRVIPANIPTACNQFVFKK 259          
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Match: A0A7C3T8L8_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3T8L8_9BACT)

HSP 1 Score: 243 bits (621), Expect = 3.480e-77
Identity = 130/261 (49.81%), Postives = 165/261 (63.22%), Query Frame = 1
Query:    1 QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFGQGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSILDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGRLVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTGRNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPAAVPTGCNEFAF 783
            +F FG+NW  ++  AL+P ++ QA AAF RL    G EL GRSF+DIGFGQGL    AA  G  V   DI+P   Q LE  +  F     R     + SILD + V      A     F++VHSWGVLHHTG M  AI NA  +V+ GG LVLA+YNRHW+ P W  IK +Y   P  ++  MV + +PV++ AK+ VTG+NPR  DRGMDFY+D+VDW+GGYPY+YASVEEV   ++  GF      PA+VPTGCNE+ F
Sbjct:    5 RFHFGKNWQSYAAKALTPARIRQAVAAFERLFD--GIELEGRSFLDIGFGQGLTAAIAAIKGCDVLAMDIDPDNLQALELTKKAF--RLERDIKTQIASILDDSFV------AGWKGHFDVVHSWGVLHHTGDMNTAIANACQMVKKGGYLVLAIYNRHWSCPFWKAIKYVYNLCPSPIQTMMVLVFYPVVYTAKYLVTGKNPREKDRGMDFYHDLVDWIGGYPYQYASVEEVCQMIEGWGFRCIRVRPASVPTGCNEYVF 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12108.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B9A053_9DELT5.400e-10059.70Class I SAM-dependent methyltransferase n=3 Tax=De... [more]
UPI001D09A42E1.050e-9657.09class I SAM-dependent methyltransferase n=1 Tax=Mi... [more]
UPI001CCD6ACF1.460e-9556.55class I SAM-dependent methyltransferase n=1 Tax=Mi... [more]
UPI00131BDEC25.150e-9557.20class I SAM-dependent methyltransferase n=1 Tax=Ly... [more]
A0A2N2KDI3_9DELT2.290e-9357.47Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A3M1UMR0_9EURY1.890e-9253.61Class I SAM-dependent methyltransferase n=1 Tax=Eu... [more]
A0A090ACN8_9GAMM2.410e-8952.293-demethylubiquinone-9 3-methyltransferase n=1 Tax... [more]
A7BXQ0_9GAMM5.990e-8655.263-demethylubiquinone-9 3-methyltransferase n=1 Tax... [more]
A0A0S6VRR0_9BACT1.080e-7747.913-demethylubiquinone-9 3-methyltransferase n=1 Tax... [more]
A0A7C3T8L8_9BACT3.480e-7749.81Class I SAM-dependent methyltransferase n=1 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12108contigP-wetherbeei_contig12108:375..1172 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1121406.JAEX01000016_gene1850
PFAMsMethyltransf_25
Model size798
Max annot lvl28221|Deltaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.52e-59
EggNOG OGsCOG2264@1|root,COG2264@2|Bacteria,1RCZ3@1224|Proteobacteria,42TP0@68525|delta/epsilon subdivisions,2WVWA@28221|Deltaproteobacteria,2MBZU@213115|Desulfovibrionales
DescriptionRibosomal protein L11 methyltransferase (PrmA)
Cds size798
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185938.1311383-CDS-P-wetherbeei_contig12108:374..11721683185938.1311383-CDS-P-wetherbeei_contig12108:374..1172Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12108 375..1172 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12108.1.1prot_P-wetherbeei_contig12108.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12108 375..1172 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12108.1.1

>prot_P-wetherbeei_contig12108.1.1 ID=prot_P-wetherbeei_contig12108.1.1|Name=mRNA_P-wetherbeei_contig12108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
QFDFGENWSEFSDHALSPEKVAQARAAFARLMATAGAELPGRSFVDIGFG
QGLGLLSAAESGARVAGCDINPLCEQVLERNRAHFPGDARRPFPVVVGSI
LDPATVGRLLDLAPDPSGFEIVHSWGVLHHTGRMWDAIDNAASLVRPGGR
LVLALYNRHWTSPAWLLIKRIYVYSPRLLRKAMVAILFPVIFAAKWAVTG
RNPRSMDRGMDFYYDVVDWVGGYPYEYASVEEVGNYLDAKGFTLRATVPA
AVPTGCNEFAFERTA*
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mRNA from alignment at P-wetherbeei_contig12108:375..1172-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12108.1.1 ID=mRNA_P-wetherbeei_contig12108.1.1|Name=mRNA_P-wetherbeei_contig12108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig12108:375..1172- (Phaeothamnion wetherbeei SAG_119_79)
CAATTCGATTTCGGCGAGAACTGGAGCGAGTTCTCCGACCACGCTCTTTC CCCGGAGAAGGTCGCGCAGGCCCGCGCGGCGTTCGCAAGGCTGATGGCGA CCGCCGGTGCCGAGTTGCCGGGGCGCAGCTTCGTCGACATCGGGTTCGGC CAGGGCCTAGGCCTGCTGAGCGCGGCGGAGTCGGGCGCGCGGGTGGCCGG TTGCGACATCAACCCCCTCTGTGAACAGGTTCTCGAGCGCAACCGTGCTC ATTTTCCCGGGGACGCCCGGCGGCCGTTCCCGGTCGTCGTCGGTTCGATC CTCGATCCGGCGACGGTGGGCAGGCTGCTCGACCTGGCGCCCGACCCTTC AGGATTTGAAATCGTCCACTCCTGGGGCGTGCTGCATCACACCGGCCGGA TGTGGGATGCGATCGACAACGCAGCCTCGCTCGTGCGCCCCGGCGGCCGG CTCGTGCTCGCCTTGTACAACAGGCACTGGACCTCGCCCGCCTGGCTCCT GATCAAACGGATCTATGTCTACTCGCCGCGCCTGCTGCGCAAGGCGATGG TCGCCATCCTCTTTCCCGTCATCTTCGCCGCGAAATGGGCGGTGACGGGA CGCAACCCGAGGAGCATGGATCGCGGCATGGATTTCTACTATGACGTAGT CGATTGGGTCGGCGGTTACCCGTACGAATACGCTTCGGTCGAAGAGGTGG GGAACTACCTCGACGCGAAAGGATTTACCCTTCGCGCTACCGTGCCGGCC GCCGTTCCTACAGGCTGCAACGAATTCGCTTTCGAGCGTACGGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12108:375..1172-

>mRNA_P-wetherbeei_contig12108.1.1 ID=mRNA_P-wetherbeei_contig12108.1.1|Name=mRNA_P-wetherbeei_contig12108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig12108:375..1172- (Phaeothamnion wetherbeei SAG_119_79)
CAATTCGATTTCGGCGAGAACTGGAGCGAGTTCTCCGACCACGCTCTTTC
CCCGGAGAAGGTCGCGCAGGCCCGCGCGGCGTTCGCAAGGCTGATGGCGA
CCGCCGGTGCCGAGTTGCCGGGGCGCAGCTTCGTCGACATCGGGTTCGGC
CAGGGCCTAGGCCTGCTGAGCGCGGCGGAGTCGGGCGCGCGGGTGGCCGG
TTGCGACATCAACCCCCTCTGTGAACAGGTTCTCGAGCGCAACCGTGCTC
ATTTTCCCGGGGACGCCCGGCGGCCGTTCCCGGTCGTCGTCGGTTCGATC
CTCGATCCGGCGACGGTGGGCAGGCTGCTCGACCTGGCGCCCGACCCTTC
AGGATTTGAAATCGTCCACTCCTGGGGCGTGCTGCATCACACCGGCCGGA
TGTGGGATGCGATCGACAACGCAGCCTCGCTCGTGCGCCCCGGCGGCCGG
CTCGTGCTCGCCTTGTACAACAGGCACTGGACCTCGCCCGCCTGGCTCCT
GATCAAACGGATCTATGTCTACTCGCCGCGCCTGCTGCGCAAGGCGATGG
TCGCCATCCTCTTTCCCGTCATCTTCGCCGCGAAATGGGCGGTGACGGGA
CGCAACCCGAGGAGCATGGATCGCGGCATGGATTTCTACTATGACGTAGT
CGATTGGGTCGGCGGTTACCCGTACGAATACGCTTCGGTCGAAGAGGTGG
GGAACTACCTCGACGCGAAAGGATTTACCCTTCGCGCTACCGTGCCGGCC
GCCGTTCCTACAGGCTGCAACGAATTCGCTTTCGAGCGTACGGCCTGA
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