mRNA_P-wetherbeei_contig121.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: K5X9W3_PHACS (Rhomboid domain-containing protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5X9W3_PHACS) HSP 1 Score: 78.6 bits (192), Expect = 1.550e-12 Identity = 57/169 (33.73%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 440 RKHFTVSVSGV-SRRPWSMVLAAFAQEDTEHLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYH-WLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLG-RSVPA---IQALLLNVAKDALMSARTRVDFAGHLGGLALGAALAQSSWWMGRSSRL 928 RK+FTVS+ + S R W+++ A+F+ E H+ +N FT + P + LG LALY GG+ S +L+++ + +R + GASGA+YA++ F P + AL G +PA + + L ++L + TRVD AGH+GG+ LA +++G+ R+ Sbjct: 153 RKNFTVSMQNLMSGRVWTLLTASFSHEGMMHIFTNAFTFYFMAPPVLQFLGTSGFLALYLGGGIFCSVVSLWWNNSVKNRPTYSSYGASGAVYAVISFFACVAPTTRFALFGVLPIPAWLFVTGVFLMDGYESLKDSHTRVDNAGHIGGI-----LAGIGYFLGKRFRI 316
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: A0A1Y1I4Y3_KLENI (Rhomboid domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4Y3_KLENI) HSP 1 Score: 65.1 bits (157), Expect = 3.490e-8 Identity = 60/169 (35.50%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 443 KHFTVSVSGVS-RRPWSMVLAAFAQEDTEHLLSNVFTLASVGPL--SVAILGGGRTLALYAAGGVAGSAAALFYHWL--------TDRRAV------ACLGASGAIYALMGFCFSAVPGAQMALLGRSVPA----IQALLLNVAKDALMSARTRVDFAGHLGGLALGAA 886 KHF VSV+ + RR + V A F+ D HL N+ L S G + + GGG LALY AGG+ G A +W DRRA + LGASG++ AL+ P ++ + G VPA I L+++ ++ +R+ +AGHLGG A+GAA Sbjct: 99 KHFQVSVASIEDRREHTAVTANFSHSDAGHLALNMLALHSFGRMIGHPRLFGGGGLLALYLAGGL-GCVAGHCLYWSYFVPWKQGVDRRAYNARRTPSALGASGSVSALLTCSILLNPSQKLLVYGLPVPAWLYGIFVTALDLSGAIGVNHGSRIGYAGHLGGAAVGAA 266
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: A0A1I3GHN1_9ACTN (Membrane associated serine protease, rhomboid family n=2 Tax=Nocardioides psychrotolerans TaxID=1005945 RepID=A0A1I3GHN1_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 2.050e-7 Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 2 Query: 485 WSMVLAAFAQEDTEHLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLGRSVPAIQALL----LNVAKDALMSARTRVDFAGHLGGLALGAALAQSSWWMGRSSR 925 W +V + FA + H+ N+ L + GP LG R LALY G++GSA F +WL+D R+ A LGASGAI+ LMG A + + + +Q+LL +NVA L S + + + GHLGG G A+ + + R+ R Sbjct: 110 WQLVTSMFAHVEIWHIAFNMLALYAFGPQLEVALGRARFLALYLLSGLSGSA---FVYWLSDERS-ATLGASGAIFGLMG--------ALLVVAYKVGGNVQSLLTWIGINVAITVLGS--SFISWQGHLGGFVGGVAITAALVYAPRARR 246
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: UPI001F21972C (rhomboid family intramembrane serine protease n=1 Tax=Corynebacterium uropygiale TaxID=1775911 RepID=UPI001F21972C) HSP 1 Score: 61.6 bits (148), Expect = 2.640e-7 Identity = 55/137 (40.15%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 482 PWSMVLAAFAQEDTEHLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLGRSVPAIQALLLNVAKDALMSARTRVDFAGHLGGLALGAALA 892 P + A F D +HLL N+ L VG + G R LALY AGG+A SAA L++ LT LGASGAI+ALM ++L + P + L +NV L+S+ + AGHLGGLA GA +A Sbjct: 58 PLRGITALFMHVDIQHLLLNMVMLWFVGGATEIAFGSARFLALYLAGGLASSAAILYFQPLTPT-----LGASGAIFALMAILIVIYHQKGLSL---ATP-LTLLGINVVGTFLVSS---ISVAGHLGGLAGGAIIA 182
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: A0A7K0WEX6_9ACTN (Rhomboid family intramembrane serine protease n=2 Tax=root TaxID=1 RepID=A0A7K0WEX6_9ACTN) HSP 1 Score: 61.2 bits (147), Expect = 6.080e-7 Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 446 HFTVSVSGVSRRPWSMVLAAFAQEDTEHLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLGRSVPAIQALL-LNVAKDALMSARTRVDFAGHLGGLALGAALA 892 +F+ + + PW M+ AAF HLL N+FTL G + +LG R LALY GS A LF+ + +GASGAIY LMG F + +G + L+ +N+ L + + H+GGLA+GAA+A Sbjct: 88 YFSYTPLATTIAPWQMLTAAFLHGSWLHLLFNMFTLYIFGQVLEPMLGRARFLALYLVAAFGGSVAVLFF----SNPVSSVVGASGAIYGLMGAYFVLLRS-----VGERAGQLTGLIAINLIFSFLSPG---ISWQAHIGGLAIGAAVA 225
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: UPI000825D4F2 (rhomboid family intramembrane serine protease n=1 Tax=Herbiconiux solani TaxID=661329 RepID=UPI000825D4F2) HSP 1 Score: 61.2 bits (147), Expect = 8.080e-7 Identity = 53/156 (33.97%), Postives = 75/156 (48.08%), Query Frame = 2 Query: 449 FTVSVSGVSRRPWSMVLAAFAQEDTE--------HLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLGRSVPAIQALLLNVAKDALMSARTRVDFAGHLGGLALGAALA 892 +T+ +G PW M+ + FA H+L N++TL +GP +LG GR LALY G GS A F + AV LGASGAI+ LMG F L G S + +++N+A ++S + + HLGGL G +A Sbjct: 112 YTIPATGAPLEPWRMITSMFAHSPVSAQNPFGIFHILLNMYTLFVLGPSIERMLGKGRFLALYLIAGFGGSVAVAFL--ASPLSAV--LGASGAIFGLMGAYFII----NRHLGGSSAQIVVLVVINLAFGFVVSG---ISWQAHLGGLIAGGLVA 256
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: A0A6L5K561_9CHLR (Rhomboid family intramembrane serine protease n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6L5K561_9CHLR) HSP 1 Score: 59.7 bits (143), Expect = 8.500e-7 Identity = 54/171 (31.58%), Postives = 87/171 (50.88%), Query Frame = 2 Query: 371 LITTNVVVFLSRWLLYGNDPWSWRKHFTVSVSGVSRRPWSMVLAAFAQEDTEHLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLGRSVPAIQALLLNVAKD-ALMSARTRVDFAGHLGGLALG 880 LI N+++F+ +++ +P F +S RPW++V + F H+L+N+ TL G +LG G+ L +Y AGG+ GS + Y L ++A +GASGAI+AL G AV ++ ++ +PA L + + + S V + H GGLALG Sbjct: 16 LIAINLLMFVVTIIIHRTNPNFMYYTFGLSQVTFLDRPWTLVTSMFIHAGVWHILANMVTLYFFGSYLNRLLGTGKFLIIYFAGGILGS---IVYLLLAPSYSIA-IGASGAIFALGGVL--AVMRPRLRVIVFPIPAPLPLWIAIIGIFVVFSFLPNVAWQAHAGGLALG 180
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: A0A3N4Q0K0_9BACT (Rhomboid family intramembrane serine protease n=1 Tax=Chitinophaga lutea TaxID=2488634 RepID=A0A3N4Q0K0_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 2.120e-6 Identity = 55/190 (28.95%), Postives = 92/190 (48.42%), Query Frame = 2 Query: 362 TELLITTNVVVFL--SRWLLYGNDPWSWRKHFTVSVSGVSR--------RPWSMVLAAFAQEDTEHLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLGRSVPAIQ--ALLLNVA-----KDALMSARTRVDFAGHLGGLALG 880 T +LI NV+++L + +L+ W W+ TV + +PW ++ A+F D HL N++ + G +LG R LA+Y +A S A+L+++ +T LGASGA++ L+GF F+ LL + V + ALL+++ A + +T D H+GGL +G Sbjct: 149 TPILIVLNVLIYLVLTNKMLFAGSSW-WQADVTVLEQAGANFKPLTLFGQPWRLLAASFLHADVMHLFFNLYGIMIGGTYLEPLLGRWRFLAVYLLCALAASIASLWWYDITPT-----LGASGAVFGLLGFIFTL-------LLRKFVEPFERRALLISIGIYLAFSLATIFMQTNFDHGAHIGGLLMG 325
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: A0A094P9B4_9ACTN (Rhomboid domain-containing protein n=1 Tax=actinobacterium acMicro-1 TaxID=1504316 RepID=A0A094P9B4_9ACTN) HSP 1 Score: 58.9 bits (141), Expect = 2.140e-6 Identity = 47/132 (35.61%), Postives = 66/132 (50.00%), Query Frame = 2 Query: 362 TELLITTNVVVFLSRW---------LLYGNDPWSWRKHFTVSVSGVSRRPWSMVLAAFAQEDTE--HLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMG 724 T +LI NV V+L + LLY P+ F + +GV PW M+ A FA T H+L N+FTL G + ++LG R + LY G+AGS L++ + +GASGAI+ LMG Sbjct: 2 TYVLIAINVFVYLLQLIPGINLTAVLLY--SPYYSLGEF--AAAGVPYEPWRMITATFAHSPTSFLHILFNMFTLWIFGQVLESMLGRARFITLYLIAGLAGSLGVLYFDLGLGLEFTSVVGASGAIFGLMG 129
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Match: A0A2N5KN23_9ACTN (Rhomboid family intramembrane serine protease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5KN23_9ACTN) HSP 1 Score: 58.9 bits (141), Expect = 2.470e-6 Identity = 46/135 (34.07%), Postives = 64/135 (47.41%), Query Frame = 2 Query: 479 RPWSMVLAAFAQEDTEHLLSNVFTLASVGPLSVAILGGGRTLALYAAGGVAGSAAALFYHWLTDRRAVACLGASGAIYALMGFCFSAVPGAQMALLGRSVPAIQALLLNVAKDALMS-ARTRVDFAGHLGGLALG 880 +PW +V + F HLL N+ +L +G + A G GR A+Y G+AG A L++ T A +GASGAI+ L+G F + P I LL A + + + V A HLGGLA G Sbjct: 55 QPWRLVTSIFLHSGITHLLLNMLSLYFLGSFAEATFGRGRFFAMYGLSGIAGGLAYLYWSVFTGAIAQPAVGASGAIFGLLGGVFGYA--IRRGTFSARDPVIGQLLFLTALNLFLGFSIPNVSNAAHLGGLAGG 187 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig121.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig121.2.1 >prot_P-wetherbeei_contig121.2.1 ID=prot_P-wetherbeei_contig121.2.1|Name=mRNA_P-wetherbeei_contig121.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp MEFTDYFLLSTARLQKRRYLGLLGFWFRVPELPFADEKDIAAFADANATEback to top mRNA from alignment at P-wetherbeei_contig121:5398..6619- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig121.2.1 ID=mRNA_P-wetherbeei_contig121.2.1|Name=mRNA_P-wetherbeei_contig121.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1222bp|location=Sequence derived from alignment at P-wetherbeei_contig121:5398..6619- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig121:5398..6619- >mRNA_P-wetherbeei_contig121.2.1 ID=mRNA_P-wetherbeei_contig121.2.1|Name=mRNA_P-wetherbeei_contig121.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig121:5398..6619- (Phaeothamnion wetherbeei SAG_119_79)back to top |