mRNA_P-wetherbeei_contig12081.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12081.1.1
Unique NamemRNA_P-wetherbeei_contig12081.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: D7G554_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G554_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.130e-40
Identity = 80/135 (59.26%), Postives = 104/135 (77.04%), Query Frame = 1
Query:    1 LEMVEAELAAPALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVND-SKLQIRVRAAAALGAMLRLVHERESTDRYCRVALREVENGFARDTTERVHGSLLTISQLLEHPGPWMA-RH 399
            ++++E E A PA+E ++ +GPKG E +RYAG  +LR+LA  AP V+Y+RR AFF+ IW VVND +   +RVRAAAALGAML+LVHER+ST ++ R+ L ++E GF + T ERVHGSLL I QLL HPGPWMA RH
Sbjct:  114 MQVLEREFAKPAMELIKVTGPKG-ENQRYAGALVLRELAENAPAVVYDRRGAFFETIWLVVNDLTSAVVRVRAAAALGAMLQLVHERQSTPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 247          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A6H5K7N2_9PHAE (LysM domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N2_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.150e-27
Identity = 66/134 (49.25%), Postives = 87/134 (64.93%), Query Frame = 1
Query:    1 LEMVEAELAAPALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDRYCRVALREVENGFARDTTERVHGSLLTISQLLEHPGPWMA-RH 399
            ++++E E A PA+E ++ +GPKG E +RYAG  +LR+LA  AP V+Y+RR AFF+ IW VVND    + VR               EST ++ R+ L ++E GF + T ERVHGSLL I QLL HPGPWMA RH
Sbjct:   82 MQVLEREFAKPAMELIKVTGPKG-ENQRYAGALVLRELAENAPAVVYDRRGAFFETIWLVVND----LTVRGGG------------ESTPKHSRLVLDKIEEGFEQGTAERVHGSLLVIRQLLRHPGPWMAHRH 198          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A261XVW2_9FUNG (Serine/threonine-protein kinase TOR n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XVW2_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 7.290e-20
Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = 1
Query:   34 ALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHEREST---DRYCRVALREVENGFARDTTERVHGSLLTISQLLEHPGPWM 390
            ALEWL  SG + +E++R+A V LLR+LA+AAPT++Y       D+IW  + D+KLQIRV AA  LG  L ++++RE T   D Y ++ L E   G   ++T+ +HGSLLT   LL+H G +M
Sbjct:  137 ALEWL--SGDR-TESKRHAAVLLLRELAIAAPTLIYAHISQILDSIWIALRDTKLQIRVAAADCLGQCLDIIYKREHTMKLDWYKKI-LEEASKGLKLNSTDCIHGSLLTYQVLLDHTGMYM 254          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A4P9WSV6_9FUNG (Armadillo-type protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WSV6_9FUNG)

HSP 1 Score: 88.6 bits (218), Expect = 5.100e-18
Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 1
Query:   34 ALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDR--YCRVALREVENGFARDTTERVHGSLLTISQLLEHPGPW 387
            ALEWL+  G +  EARRYA V +LR+LA++APT++Y       D IW  + D K+ IR  AA AL A L LVH RE+  R  + R  L E + GF   +++ +HGSLLT+ +LL   G +
Sbjct:  141 ALEWLQ--GDR-HEARRYAAVLVLRELAVSAPTLIYAYVGQILDLIWVALRDPKVVIREGAADALNATLALVHVRENQQRKQWYRKILEEAQKGFKIGSSDAIHGSLLTLRELLTQKGTY 257          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A507CFK0_9FUNG (Non-specific serine/threonine protein kinase n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CFK0_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 1.660e-16
Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 1
Query:   34 ALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDR--YCRVALREVENGFARDTTERVHGSLLTISQLL 369
            ALEWL+  G + SEARRYA V +LR+LA  AP  +Y       D IW  + D K+ IR  AA  LGA L LV++RES  R  + R +  E + GF  +TT+ +HGSLLT+  LL
Sbjct:  136 ALEWLQ--GDR-SEARRYAAVLVLRELAANAPIFIYSYVPQILDLIWIALRDFKVVIREGAAETLGATLELVNQRESHSRRQWYRKSFDEAQKGFKLNTTDAIHGSLLTLRVLL 246          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A6A5Z905_9PLEO (Serine/threonine-protein kinase TOR n=2 Tax=Pleosporales TaxID=92860 RepID=A0A6A5Z905_9PLEO)

HSP 1 Score: 84.7 bits (208), Expect = 4.200e-16
Identity = 55/132 (41.67%), Postives = 81/132 (61.36%), Query Frame = 1
Query:    4 EMVEAELAAPALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDR---YCRVALREVENGFARDTTERVHGSLLTISQLLEHPGPWM 390
            E+VEAE+ A ALEWL+    + SE RR+A V +LR+LA  +PT++Y+     F+ IW  + D K+ IR  AA A+ A   ++  R+S  R   + RV   E+  GFA +T E +HGSLLT+ +LL+    +M
Sbjct:  136 ELVEAEVKA-ALEWLQM---ERSENRRFAAVLILRELARNSPTLMYQWIAQIFEVIWVALRDPKVLIRESAAEAISACFEIISPRDSQMRQQWFSRV-YDEILKGFALNTNEAIHGSLLTLKELLDKSPSFM 262          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A507C5T0_9FUNG (Non-specific serine/threonine protein kinase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C5T0_9FUNG)

HSP 1 Score: 83.2 bits (204), Expect = 1.460e-15
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   34 ALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDR--YCRVALREVENGFARDTTERVHGSLLTISQLL 369
            ALEWL+  G + SEARRYA V +LR+LA  AP  +Y       D IW  + DSK+ IR  AA  L A L LV++RES  R  + R    E + GF  +T + +HGSLLT+  LL
Sbjct: 1076 ALEWLQ--GDR-SEARRYAAVLVLRELAANAPIFIYSYVPQILDLIWVALRDSKVVIREGAAETLSATLDLVNQRESHSRRQWYRKIFDEAQKGFKMNTADAIHGSLLTLRVLL 1186          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A6A5WH36_9PLEO (Serine/threonine-protein kinase TOR n=1 Tax=Amniculicola lignicola CBS 123094 TaxID=1392246 RepID=A0A6A5WH36_9PLEO)

HSP 1 Score: 82.0 bits (201), Expect = 3.640e-15
Identity = 54/132 (40.91%), Postives = 80/132 (60.61%), Query Frame = 1
Query:    4 EMVEAELAAPALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDR---YCRVALREVENGFARDTTERVHGSLLTISQLLEHPGPWM 390
            E+VEAE+   ALEWL+    + SE RR+A V +LR+LA  +PT++Y+     F+ IW  + D K+ IR  AA A+ A   ++  R+S  R   + RV   E+  GFA +T E +HGSLLT+ +LL+    +M
Sbjct:  137 ELVEAEVKG-ALEWLQL---ERSENRRFAAVLILRELAKNSPTLMYQWIAQIFEVIWVALRDPKVLIRESAAEAISACFEIISPRDSQMRQQWFGRV-YDEILKGFALNTNEAIHGSLLTMKELLDKSAMFM 263          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: A0A6A6YYY3_9PEZI (Serine/threonine-protein kinase TOR n=2 Tax=Mytilinidiaceae TaxID=281242 RepID=A0A6A6YYY3_9PEZI)

HSP 1 Score: 82.0 bits (201), Expect = 3.640e-15
Identity = 53/132 (40.15%), Postives = 81/132 (61.36%), Query Frame = 1
Query:    4 EMVEAELAAPALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHEREST---DRYCRVALREVENGFARDTTERVHGSLLTISQLLEHPGPWM 390
            E+VEAE+   ALEWL+    +  E RR+A V +LR+LA  +PT++Y+     FD IW  + D K+ IR  AA A+ A   ++  R+S+   D + RV  +E+  GF+ +T + +HGSLLT+ +LLE    +M
Sbjct:  134 ELVEAEVNG-ALEWLQM---ERQENRRFAAVLILRELAKNSPTLMYKWVPQIFDVIWAALRDPKVLIRESAAEAISACFEIISPRDSSMRQDFFGRV-YKEILVGFSMNTNDSIHGSLLTMKELLEKGAMFM 260          
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Match: TOR_DICDI (Serine/threonine-protein kinase tor n=2 Tax=Dictyostelium TaxID=5782 RepID=TOR_DICDI)

HSP 1 Score: 81.3 bits (199), Expect = 6.750e-15
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   34 ALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRAFFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDR--YCRVALREVENGFARD-TTERVHGSLLTISQLLEHPGPWM 390
            ALEWL  SG +  EARR+A V +L++LA  APT+ Y    +F D IW  + D K+ IR  A  AL A L L+ ERES  R  + +    E +  F ++ + E +HGSL+T+S+LL + G +M
Sbjct:  146 ALEWL--SGDR-IEARRHAAVLVLKELAQNAPTLFYVHASSFVDLIWVALKDPKVAIREGAVEALRACLELISERESRLRLQWYQKIYDEAQKSFKQNGSPESIHGSLITVSELLRNTGDFM 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12081.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G554_ECTSI1.130e-4059.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7N2_9PHAE2.150e-2749.25LysM domain-containing protein (Fragment) n=1 Tax=... [more]
A0A261XVW2_9FUNG7.290e-2045.90Serine/threonine-protein kinase TOR n=1 Tax=Bifigu... [more]
A0A4P9WSV6_9FUNG5.100e-1845.00Armadillo-type protein (Fragment) n=1 Tax=Blyttiom... [more]
A0A507CFK0_9FUNG1.660e-1647.37Non-specific serine/threonine protein kinase n=2 T... [more]
A0A6A5Z905_9PLEO4.200e-1641.67Serine/threonine-protein kinase TOR n=2 Tax=Pleosp... [more]
A0A507C5T0_9FUNG1.460e-1546.49Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6A5WH36_9PLEO3.640e-1540.91Serine/threonine-protein kinase TOR n=1 Tax=Amnicu... [more]
A0A6A6YYY3_9PEZI3.640e-1540.15Serine/threonine-protein kinase TOR n=2 Tax=Mytili... [more]
TOR_DICDI6.750e-1542.62Serine/threonine-protein kinase tor n=2 Tax=Dictyo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12081contigP-wetherbeei_contig12081:1180..2044 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G554
PFAMsFAT,FATC,NUC194,PI3_PI4_kinase,SMG1
Model size474
Max annot lvl2759|Eukaryota
KEGG koko:K06642,ko:K07203,ko:K08873
KEGG Pathwayko01521,ko01522,ko03015,ko03450,ko04012,ko04066,ko04072,ko04110,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map03015,map03450,map04012,map04066,map04072,map04110,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00297
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.39e-41
EggNOG OGsCOG5032@1|root,KOG0891@2759|Eukaryota
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-00_008560.1
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size468
COG categoryBDLTU
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03032,ko03400,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185937.1974308-UTR-P-wetherbeei_contig12081:1179..11851683185937.1974308-UTR-P-wetherbeei_contig12081:1179..1185Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12081 1180..1185 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185937.2093978-CDS-P-wetherbeei_contig12081:1185..14761683185937.2093978-CDS-P-wetherbeei_contig12081:1185..1476Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12081 1186..1476 +
1683185937.218998-CDS-P-wetherbeei_contig12081:1867..20441683185937.218998-CDS-P-wetherbeei_contig12081:1867..2044Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12081 1868..2044 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12081.1.1prot_P-wetherbeei_contig12081.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12081 1186..2044 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12081.1.1

>prot_P-wetherbeei_contig12081.1.1 ID=prot_P-wetherbeei_contig12081.1.1|Name=mRNA_P-wetherbeei_contig12081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
MVEAELAAPALEWLRESGPKGSEARRYAGVQLLRQLAMAAPTVLYERRRA
FFDNIWPVVNDSKLQIRVRAAAALGAMLRLVHERESTDRYCRVALREVEN
GFARDTTERVHGSLLTISQLLEHPGPWMARHSNTGGHSNSGGGHSGGSAA
GGSGTG
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mRNA from alignment at P-wetherbeei_contig12081:1180..2044+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12081.1.1 ID=mRNA_P-wetherbeei_contig12081.1.1|Name=mRNA_P-wetherbeei_contig12081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=865bp|location=Sequence derived from alignment at P-wetherbeei_contig12081:1180..2044+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAGATGGTGGAGGCGGAGCTGGCGGCGCCGGCGCTTGAATGGCTTCG GGAGTCCGGCCCCAAGGGCAGCGAGGCGCGGCGCTACGCGGGCGTACAGC TACTACGGCAGCTGGCCATGGCGGCGCCGACGGTGCTATACGAGCGGCGG CGGGCGTTCTTTGACAACATTTGGCCTGTGGTGAACGACAGCAAGCTGCA GATCCGGGTGCGGGCGGCGGCGGCGCTGGGGGCGATGCTGCGGCTGGTGC ACGAGCGGGAGAGCACCGACCGCTACTGCCGCGTGGCCCTCCGTGAGGTG AGGGAGGAGGGGAAGGGAAAGGAATTTCCCGGTTGTGGTACACACGTTTC TCTTGGTGCTGGAAAGGCCTTGAACATCCTAGATGAGGACTGCTATCCTC TCGTTTCCGCCGTCAAAGCTACTCGCGCTCTCATTCACCTATAGGTTAAC GTTACAGCGACCTTTTCTCATGTTGTCCCTCGCGATTACCACTGTACCCT AATTCTAACGCTAACTAACTGCTTGCACATTTTAGGGCAGCTCGCATGCG GCTCTATTGCTTTCTCACAAGCTCTCGGAAGCCCCCTTCCTGTTTCCGCG CCCCTTCTGTTTCCGCGCTGAACTGGCCCTCCAACCCTAACCCTAACCCT GCTTGCTGCGTCTCCAAACCACATCTGTCACCAACCAGGTGGAAAATGGC TTTGCACGTGACACGACAGAGCGCGTCCACGGTAGCCTCCTCACGATAAG CCAGCTGCTCGAGCACCCGGGCCCCTGGATGGCCCGCCACAGCAACACCG GCGGCCACAGCAACAGCGGCGGCGGTCACAGTGGCGGCAGCGCGGCGGGC GGCAGCGGGACGGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12081:1180..2044+

>mRNA_P-wetherbeei_contig12081.1.1 ID=mRNA_P-wetherbeei_contig12081.1.1|Name=mRNA_P-wetherbeei_contig12081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig12081:1180..2044+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGAGGCGGAGCTGGCGGCGCCGGCGCTTGAATGGCTTCGGGAGTC
CGGCCCCAAGGGCAGCGAGGCGCGGCGCTACGCGGGCGTACAGCTACTAC
GGCAGCTGGCCATGGCGGCGCCGACGGTGCTATACGAGCGGCGGCGGGCG
TTCTTTGACAACATTTGGCCTGTGGTGAACGACAGCAAGCTGCAGATCCG
GGTGCGGGCGGCGGCGGCGCTGGGGGCGATGCTGCGGCTGGTGCACGAGC
GGGAGAGCACCGACCGCTACTGCCGCGTGGCCCTCCGTGAGGTGGAAAAT
GGCTTTGCACGTGACACGACAGAGCGCGTCCACGGTAGCCTCCTCACGAT
AAGCCAGCTGCTCGAGCACCCGGGCCCCTGGATGGCCCGCCACAGCAACA
CCGGCGGCCACAGCAACAGCGGCGGCGGTCACAGTGGCGGCAGCGCGGCG
GGCGGCAGCGGGACGGGG
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