mRNA_P-wetherbeei_contig1205.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1205.5.1
Unique NamemRNA_P-wetherbeei_contig1205.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A3C0TU36_9PROT (Aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TU36_9PROT)

HSP 1 Score: 816 bits (2107), Expect = 1.310e-297
Identity = 377/436 (86.47%), Postives = 406/436 (93.12%), Query Frame = 1
Query:    1 MNKPTVGPFSQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVNARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAYGGKPFAGDQNTSFQMTSQGHGWESGYDGSEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNRDAQKAAE 1308
            M K  + PFSQ+VN EEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIP+ GDFLTTYMGEDAVIVSRRKD GV VF+NSCPHRGN VCFA AGNTRQFICNYHGWSFGNDGAL+GM +EYVY+ DPAFDK + GLVNARVETWKGLVFATFA DAP L+EYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGW HM GSLA+GG+PF  DQNTSFQMTS+GHGWESG+DGSE+RGLGS+AIAQYVM QRPLIERRLGPERAKMIG+I+SV+MFPNFSFLPGINTFRVWQPKGPD+TEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWE AT++N+GVVTRRQKL+Y MN  A +G  NYPGRVRQGQ+GDNNQ+AMYQRWADLMDA++WA VP+RD QKAAE
Sbjct:    1 MGKQNLRPFSQYVNAEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPNPGDFLTTYMGEDAVIVSRRKDNGVAVFINSCPHRGNPVCFAGAGNTRQFICNYHGWSFGNDGALLGMPDEYVYEADPAFDKKKLGLVNARVETWKGLVFATFAKDAPDLREYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWNHMGGSLAFGGQPFKADQNTSFQMTSRGHGWESGFDGSELRGLGSLAIAQYVMAQRPLIERRLGPERAKMIGSISSVTMFPNFSFLPGINTFRVWQPKGPDRTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWEGATKSNRGVVTRRQKLYYRMNLNAAEGAPNYPGRVRQGQLGDNNQLAMYQRWADLMDAENWAAVPDRDLQKAAE 436          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A353LN42_9PROT (Aromatic ring-hydroxylating dioxygenase subunit alpha n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LN42_9PROT)

HSP 1 Score: 663 bits (1710), Expect = 4.260e-237
Identity = 309/439 (70.39%), Postives = 357/439 (81.32%), Query Frame = 1
Query:    1 MNKPTVGPFSQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQ-DPAFDKTRHGLVNARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAYGGKPFAGDQNTSFQMTSQGHGWESGYDGSEM-RGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNR-DAQKAAE 1308
            M++     ++ +++ EEGWIDRRIF DR+IYD ELEQIFAR WLFV HESQI   GDFLTTYMGEDAVI+SRRKD G+GVFLNSCPHRGNRVCFADAGNTRQF+CNYHGWSFG+ G L+GMHEEYVY++    FDK + GLV ARV T+KGL+FATF  DAP L +Y+G FAWYLDM++DTDEGGTE + G VRNVLNCNWKFPAENFHGDAYHVGW H+AGS+A+GG  F  DQN SFQM S GHGWE+   G  M     S  + +YV++  P IE RLG ERA++ GAI+SV+MFPNFSFLPG+N  RVWQPKGP +TEIWAW LVNKNAP+ VKQD+RR  MR+FSP GMLEMDDGENWE+AT +N GVVTRRQKL+Y MN  APDGP   PG V+ GQ+GDNNQ+AMYQRWADLMDA  WADVP+R  A+KAAE
Sbjct:    1 MSEAGARKYADYIDVEEGWIDRRIFWDREIYDKELEQIFARSWLFVGHESQIAKPGDFLTTYMGEDAVILSRRKDGGIGVFLNSCPHRGNRVCFADAGNTRQFVCNYHGWSFGSAGELLGMHEEYVYREASKNFDKQKLGLVQARVGTYKGLIFATFDPDAPELLDYMGDFAWYLDMLVDTDEGGTEVIGGAVRNVLNCNWKFPAENFHGDAYHVGWNHLAGSMAFGGSGFKADQNGSFQMNSNGHGWETAMGGGAMITAHNSGPVLEYVLENLPKIENRLGKERAEIYGAISSVTMFPNFSFLPGLNAIRVWQPKGPTRTEIWAWVLVNKNAPDIVKQDMRRGVMRTFSPGGMLEMDDGENWENATLSNAGVVTRRQKLYYGMNLNAPDGPDYLPGNVKMGQLGDNNQLAMYQRWADLMDAPGWADVPDRRQAKKAAE 439          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: UPI001B1CF891 (3-phenylpropionate/cinnamic acid dioxygenase subunit alpha n=1 Tax=Rhodospirillales bacterium TMPK1 TaxID=2812848 RepID=UPI001B1CF891)

HSP 1 Score: 529 bits (1362), Expect = 2.710e-184
Identity = 248/432 (57.41%), Postives = 314/432 (72.69%), Query Frame = 1
Query:    1 MNKPTVGPFSQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVN-ARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAY-GGKPFAGDQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNR 1287
            M   +   ++  V+ + G IDRRIF DR +Y+AELEQIFARCWLFVAHESQIP  GDF+TTYMGED VIV+R++D  +  FLNSCPHRGNRVC ADAG  R FICNYHGWSFG DG+L GMHE+  Y     FD++R+GL   A+++T+KGLVFATF  +APSL++YLG F WYLD +LD+DEGGTEF+PG+V++VL CNWKFPAENF GD  H GWTH +G+ A  GG    GD+N SF ++  GHGWE+  D       LG   I +Y+ +++  +  RLG  RA+M GAI+S ++FPNFSFLPG +TFR WQPKGP +TE+  W LVN++ P+E+K+  RR  M +FSP+G+ EMDDGENWE  TR+N GVVTRRQ+L+Y +   A    ++ PG V +  + D NQ A YQRWADL+ A  WA VP R
Sbjct:    1 MTMSSFADYAALVDADAGVIDRRIFWDRAVYEAELEQIFARCWLFVAHESQIPKPGDFITTYMGEDHVIVARQRDNSIACFLNSCPHRGNRVCHADAGQARGFICNYHGWSFGLDGSLRGMHEQAAYDATSCFDRSRNGLKPVAQLDTYKGLVFATFDANAPSLRDYLGVFTWYLDAVLDSDEGGTEFLPGSVKSVLRCNWKFPAENFVGDILHAGWTHDSGARAMLGGSVDLGDRNESFHVSVNGHGWETNLDVVGNAATLGDRRILRYIRERQAAMTERLGDVRARMYGAISSATVFPNFSFLPGQSTFRTWQPKGPGETELHTWVLVNRSMPDEIKEAYRRGVMMTFSPTGVFEMDDGENWEFCTRSNAGVVTRRQQLNYQLGLGAAAQQSDLPGTVHRNSINDANQRAFYQRWADLIAASDWASVPQR 432          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A836X6I2_9GAMM (Aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836X6I2_9GAMM)

HSP 1 Score: 511 bits (1317), Expect = 4.120e-177
Identity = 236/429 (55.01%), Postives = 307/429 (71.56%), Query Frame = 1
Query:   25 FSQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVN-ARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAYG-GKPFAG-DQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNRDAQK 1299
            +S++++ EEGW+DRRIF ++ I++ E+ QIFARCW+F+AHE+QIP  GDF+TTYMGED VIV+R+KD  +  FLNSCPHRGNRVCFAD GNTR+F+CNYHGWSF  +G L GMHEEY Y++    DK++ GL   A+++T+KGLVFATF + APSL+ YLG F WYLD +LD +EGGTEF+ G +++V+  NWKF  ENF GDAYH GWTH +G  A   G PF   D   SF  +  GHGWE G +G  ++  LG   + +Y    RP +  RLG  R+K+ G++AS S+FPN SFLPGI+TFR W PKGP + E+  W +VNKN P+E+K DI +  M +F P G  EMDDGENWE+ T+ N+GVVTR +KLHY           ++PG + +GQ  D+NQ   YQRWAD+M+A SW+DVP R A K
Sbjct:   13 YSKYMDLEEGWVDRRIFAEQAIFEQEMYQIFARCWIFLAHETQIPKPGDFITTYMGEDKVIVARQKDMSIKAFLNSCPHRGNRVCFADQGNTRRFVCNYHGWSFDTEGNLQGMHEEYCYEEGD-IDKSQWGLKQVAQLDTYKGLVFATFDETAPSLEHYLGDFRWYLDALLDNEEGGTEFIGGCIKSVIGANWKFGVENFIGDAYHAGWTHDSGCRAMNDGNPFPPVDMQNSFHASVNGHGWEFGMEGVGDIFLLGRPRVMEYYNDIRPKMAERLGEARSKIFGSVASASIFPNVSFLPGIHTFRTWNPKGPWELELKTWVIVNKNMPDEIKDDITKGVMCTFGPGGAFEMDDGENWENCTKVNRGVVTRHEKLHYRCGISRQIDHPDFPGTIYRGQYNDSNQRLFYQRWADMMNAPSWSDVPTRYASK 440          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A0C5J902_9RHOO (Ribosomal subunit interface protein n=3 Tax=Bacteria TaxID=2 RepID=A0A0C5J902_9RHOO)

HSP 1 Score: 511 bits (1316), Expect = 5.850e-177
Identity = 241/427 (56.44%), Postives = 304/427 (71.19%), Query Frame = 1
Query:   19 GPFSQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVN-ARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAYG-GKPF-AGDQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNR 1287
            G +  ++N +EGW+DRR+F ++ IYD E+EQIFARCWLFVAHESQIP+ GDFLTTYMGED VIV R+KD  V VFLNSCPHRGN+V FAD GNTR+F+CNYHGW F   G LMGMHEEY Y      DK++ GL   A+V  +KGL+FATF + APSL++YLG F WYLDM+LD +EGGTE + G +++V+  NWKF  ENF GDAYH GWTH +G+ A   G+PF A D   S+  +  GHGWE G +G  ++  LG   + +Y  + RP +  RLG  R+K+ G++AS S+FPN SFLPGI+TFR W PKGP + E+  W +VNKN P+++K +I +  M++F P G  EMDDGENWE+ T+ N+GVVTRR+KLHY             PG V QGQ  D NQ  MYQRW DLM+A+SW DVP R
Sbjct:   10 GRYDSYMNLDEGWLDRRVFWEQAIYDREMEQIFARCWLFVAHESQIPNPGDFLTTYMGEDGVIVCRQKDNAVKVFLNSCPHRGNKVSFADIGNTRRFVCNYHGWGFDTAGTLMGMHEEYCYDAGD-IDKSQWGLKQVAKVGNYKGLIFATFDEAAPSLEDYLGDFRWYLDMLLDNEEGGTELIGGCIKSVIGANWKFGVENFIGDAYHAGWTHDSGTRAMNNGQPFPAIDMKNSYHASMNGHGWEFGTEGMGDIVLLGRPKVMEYYNKIRPKMAERLGEMRSKIFGSVASASIFPNVSFLPGISTFRQWMPKGPTQFELRTWVIVNKNMPDDIKNEITKGVMQTFGPGGAFEMDDGENWENCTQTNRGVVTRREKLHYRSGISRRIEHPELPGIVYQGQYNDANQRNMYQRWLDLMNAESWKDVPER 435          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: UPI0018831431 (aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Kordiimonas pumila TaxID=2161677 RepID=UPI0018831431)

HSP 1 Score: 511 bits (1315), Expect = 8.590e-177
Identity = 240/427 (56.21%), Postives = 306/427 (71.66%), Query Frame = 1
Query:   37 VNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVN-ARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAYGGKPFA-GDQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNRDAQKAAE 1308
            ++ + G +DRRIF DR IY+ ELEQIFARCWLF+AHESQIP+ GDF+TTYMGED VIV R+ D  +  FLNSCPHRGNRV FA  G  R FICNYHGW+FG DG+L GM +  +Y   P F K  HGL+  A+++T+KGLVFATF  +APSL++YLG FAWY+D++LD DEGGTEF+PG V++V+  NWKF A+NF GD YH  WTH +G+ A    P     Q+ +   +S GHG E+  D     R LG   I  Y+  +  + E RLG ERA+MIGAI+S ++FPNFSFLPG NTFRVWQPKGPDK E+++W LVNKN P EVK+  RR +M +FSP+G+ EMDDGENWE +TRAN GV+TR+QKL Y+M   +     ++PG + +G + D NQ   YQRW DLM   +W D+P+R A++  E
Sbjct:   24 IDVDTGAVDRRIFWDRSIYETELEQIFARCWLFLAHESQIPNKGDFVTTYMGEDQVIVIRQLDGSIKAFLNSCPHRGNRVTFAGQGTARGFICNYHGWAFGTDGSLKGMPQAKLYANTPGFKKCNHGLMQVAQLDTYKGLVFATFDTEAPSLRDYLGHFAWYMDVLLDNDEGGTEFLPGCVKSVMKANWKFAADNFAGDIYHAEWTHDSGAQAIANAPVKLARQDQAIHASSNGHGIETSLDKFGNTRTLGEPVIEDYLRSRWDIFEARLGAERARMIGAISSATVFPNFSFLPGQNTFRVWQPKGPDKIELYSWTLVNKNMPAEVKEAYRRGSMMTFSPAGVFEMDDGENWEFSTRANAGVITRKQKLCYSMGLGSELADTDFPGIIHRGSLNDANQRLFYQRWQDLMTTGNWHDLPDRSARQQRE 450          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A829YPT9_9GAMM (3-phenylpropionate/cinnamic acid dioxygenase subunit alpha n=1 Tax=Steroidobacter agaridevorans TaxID=2695856 RepID=A0A829YPT9_9GAMM)

HSP 1 Score: 508 bits (1309), Expect = 2.910e-176
Identity = 234/419 (55.85%), Postives = 302/419 (72.08%), Query Frame = 1
Query:   31 QFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVNARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLA-YGGKPFAGDQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVP 1281
            + ++ + GW+DRRIF DR IY+AELE+IFARCWLFVAHESQI   GDFLTTYMGEDAVIV+R +D+ + VFLNSC HRGNRVCFA+AG  R F+CNYHGWSFG DG  +   ++ +Y++  +FD  R GL  ARVET+KGLVFATF  DAPSL +YLG F WYLD++LD D+GGTEFV G +++ L CNWK PAENF GDAYH  WTH +G+ A +G   +    + S+Q    GHGWE G DG      LG   I +++  + P +  RLG ERA+M+GA++SV++FPNFSFLPG   FRVW PKGP + E+  W+++N+  PE +K+  R+  MR+FSP+G+LEMDDGENWE AT+ N G VTR +KL+Y + + +      +PG +   Q  D NQ A Y+RWA+L+ AK WADVP
Sbjct:   11 RLLDLDNGWVDRRIFFDRGIYEAELERIFARCWLFVAHESQIAVPGDFLTTYMGEDAVIVARGRDRSINVFLNSCSHRGNRVCFAEAGRARSFVCNYHGWSFGLDGRFLAAPQQALYERCSSFDPNRLGLHRARVETYKGLVFATFDPDAPSLADYLGDFTWYLDVVLDNDDGGTEFVEGCIKSRLKCNWKVPAENFVGDAYHAPWTHDSGARAVFGRGVWMAPDHESYQANINGHGWEFGLDGVGNAAALGYREIVEHLRSREPAVAARLGNERARMVGALSSVTLFPNFSFLPGHLAFRVWHPKGPHEIELHTWSMINRGDPEHIKEMYRKGVMRTFSPAGILEMDDGENWEHATQTNAGFVTRTRKLYYGLGQGSQCERPPFPGNLFANQFNDANQRAFYRRWANLLSAKGWADVP 429          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A0G2UHE0_9BACT (Aromatic-ring-hydroxylating dioxygenase n=3 Tax=Bacteria TaxID=2 RepID=A0A0G2UHE0_9BACT)

HSP 1 Score: 504 bits (1298), Expect = 2.070e-174
Identity = 237/436 (54.36%), Postives = 304/436 (69.72%), Query Frame = 1
Query:    7 KPTVGPFSQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVNARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAY-GGKPFA-GDQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNRDAQKAA 1305
            +P    +  +VNTEEGW+DRRIF + +IY  ELE+IFAR W F+AH+SQIP  GDF+TTYMGED VI  R K   V VFLNSCPHRGN+VC+AD+GN++ F CNYHGW+FG DG+L+G+H E++Y+ D   +K   GL  ARV T+KGLVFA F  +AP L ++LG + WYLDM+LD +EGG EF+PGT+++ +N NWKF  ENF GD+ H  WTH +G+ A  GG+PF   DQ  S+  ++ GHGWE G DG +++  LG   + +Y    RP +  RLG  RAK+ G++AS +MFPN SFLPG+ TFRVW P+GP K E+  W +VNKN P+ +KQ I +  M +FSP G LEMDDGENWE  T+ NKGV+TR+ KLHY     +       PG V  GQ  D NQ+A YQRWADLM+A SW DVP R   + A
Sbjct:    5 RPFPADYHDYVNTEEGWVDRRIFWEEEIYQQELEKIFARSWHFIAHDSQIPKTGDFVTTYMGEDGVIGVRDKGGQVRVFLNSCPHRGNKVCYADSGNSKNFTCNYHGWAFGMDGSLLGIHNEHIYEGD--INKADWGLREARVSTYKGLVFANFDVEAPELDDWLGDYRWYLDMLLDNEEGGIEFLPGTIKSYVNANWKFGVENFIGDSLHAMWTHDSGAKAMMGGEPFPPADQTGSYHGSANGHGWEFGTDGIADIAILGQPEVIEYYESIRPKMRERLGEMRAKIFGSLASAAMFPNISFLPGLGTFRVWLPRGPRKMELRIWTIVNKNMPDHIKQLINKGTMLTFSPGGTLEMDDGENWEGNTQTNKGVITRQGKLHYGCGSASRIDHPEIPGIVHHGQYNDANQLAFYQRWADLMNADSWEDVPQRHEPRFA 438          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A5D0NZV4_9ACTN (Rieske 2Fe-2S domain-containing protein n=3 Tax=Actinomadura TaxID=1988 RepID=A0A5D0NZV4_9ACTN)

HSP 1 Score: 503 bits (1296), Expect = 2.560e-174
Identity = 236/418 (56.46%), Postives = 302/418 (72.25%), Query Frame = 1
Query:   46 EEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVN-ARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAYGGKPFA---GDQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPN 1284
            ++GW+DRR+F DRD+Y+ EL +IFARCWLFVAHESQ+P  G FLTT+MGED V+V RR+D  +G +LNSCPHRGNRVC A+AG  R F+CNYHGWSF  DG L G+HE   + ++P FD++R GL   A+++T+KGLVFATF  DAP L++YLG FA+YLD+MLD DEGGTEF  G++ +VL+CNWK  AENF GDA H GWTH +G+ A  G+  A   GD   S+ +   GH WE   DG      LG   I  Y+         RLGP RA+M+G+I+SV++FPNFSFLPG NTFR WQPKGP +TE+  W LVN++APEEVK   R+ AM +FSPSG+ EMDDGENWE ATR+N+GVVTRRQ+L+Y +           PG V +GQ+ D NQ A Y+RW++L+ A +W +VP+
Sbjct:   12 DDGWLDRRVFWDRDVYELELARIFARCWLFVAHESQLPKPGSFLTTWMGEDHVLVVRRRDGSIGAYLNSCPHRGNRVCTAEAGTARGFVCNYHGWSFDLDGRLAGVHESAAFGREPTFDRSRLGLTPVAQLDTYKGLVFATFDPDAPPLRDYLGDFAFYLDVMLDNDEGGTEFAGGSITSVLDCNWKIAAENFAGDALHAGWTHASGAEAMLGRGVAELGGDGAESYHVNVNGHCWEFNLDGVGNAATLGDRRIIDYLRANEARFADRLGPLRARMVGSISSVNVFPNFSFLPGQNTFRTWQPKGPHRTELRTWVLVNRDAPEEVKDAWRKGAMMTFSPSGVFEMDDGENWELATRSNQGVVTRRQRLYYGLGSDTAVEHPELPGNVHRGQVNDANQRAFYRRWSELLRAGTWDEVPS 429          
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Match: A0A7C7SED4_9GAMM (Aromatic ring-hydroxylating dioxygenase subunit alpha n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7SED4_9GAMM)

HSP 1 Score: 503 bits (1295), Expect = 8.990e-174
Identity = 238/430 (55.35%), Postives = 307/430 (71.40%), Query Frame = 1
Query:   28 SQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHESQIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNTRQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVN-ARVETWKGLVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNWKFPAENFHGDAYHVGWTHMAGSLAYG-GKPFAG-DQNTSFQMTSQGHGWESGYDG-SEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFSFLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPSGMLEMDDGENWESATRANKGVVTRRQKLHY--AMNRLAPDGPANYPGRVRQGQMGDNNQMAMYQRWADLMDAKSWADVPNRDAQK 1299
            S++++  EGWIDRRIF ++DIY+ EL QIFARCWLFVAHESQIP++GDFLTTYMGED VI+ R+KD  +  FLNSCPHRGNRVCFAD GN R+F+CNYHGWSF   GAL G+HEEY Y +    DK   GL   A+++++KGL+FATF ++APSL +YLG F WYLDM+LD +EGGTE + G + +V++ NWKF  ENF GDAYH GWTH +G+ A   G+PF   D N S+  +  GHGWE G +G  ++  LG   + +Y    RP +  RLG  R+K+ G++AS S+FPN SFLPGI+T R W PKGP + E+  W +VNKN P E+K DI +  M +F P G  EMDDGENWE+ T+ N GV+ R QKLHY   +NR   D P + PG +  GQ  D NQ   Y+RW D+M+++SW+D+P+R AQK
Sbjct:   14 SKYMDLNEGWIDRRIFWEKDIYEQELYQIFARCWLFVAHESQIPNSGDFLTTYMGEDNVIIVRQKDGSINGFLNSCPHRGNRVCFADTGNARRFVCNYHGWSFNTAGALQGVHEEYCYDEGD-LDKQSCGLKQVAQIDSYKGLIFATFDEEAPSLDQYLGDFRWYLDMLLDNEEGGTELIGGCINSVIDANWKFGVENFVGDAYHAGWTHDSGARAMNNGEPFPPVDMNNSYHASINGHGWEFGMEGVGDIGLLGRPRVMEYYNDIRPKMAERLGEVRSKIFGSVASSSVFPNMSFLPGIHTIRTWLPKGPTQLELRTWVIVNKNMPAEIKDDITKGVMCTFGPGGSFEMDDGENWENCTKVNAGVIARHQKLHYRCGINRKI-DNP-DMPGTMYLGQYNDANQRLFYERWRDMMNSQSWSDIPDRYAQK 440          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1205.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TU36_9PROT1.310e-29786.47Aromatic ring-hydroxylating dioxygenase subunit al... [more]
A0A353LN42_9PROT4.260e-23770.39Aromatic ring-hydroxylating dioxygenase subunit al... [more]
UPI001B1CF8912.710e-18457.413-phenylpropionate/cinnamic acid dioxygenase subun... [more]
A0A836X6I2_9GAMM4.120e-17755.01Aromatic ring-hydroxylating dioxygenase subunit al... [more]
A0A0C5J902_9RHOO5.850e-17756.44Ribosomal subunit interface protein n=3 Tax=Bacter... [more]
UPI00188314318.590e-17756.21aromatic ring-hydroxylating dioxygenase subunit al... [more]
A0A829YPT9_9GAMM2.910e-17655.853-phenylpropionate/cinnamic acid dioxygenase subun... [more]
A0A0G2UHE0_9BACT2.070e-17454.36Aromatic-ring-hydroxylating dioxygenase n=3 Tax=Ba... [more]
A0A5D0NZV4_9ACTN2.560e-17456.46Rieske 2Fe-2S domain-containing protein n=3 Tax=Ac... [more]
A0A7C7SED4_9GAMM8.990e-17455.35Aromatic ring-hydroxylating dioxygenase subunit al... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1205contigP-wetherbeei_contig1205:5023..6333 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1198232.CYCME_2562
PFAMsRieske,Ring_hydroxyl_A
Model size1311
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC00098
KEGG koko:K05708,ko:K14748
KEGG ReactionR05440,R06782,R06783
KEGG Pathwayko00360,ko00642,ko01100,ko01120,ko01220,map00360,map00642,map01100,map01120,map01220
KEGG ModuleM00545
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.44e-170
EggNOG OGsCOG4638@1|root,COG4638@2|Bacteria,1N6MJ@1224|Proteobacteria,1RNCN@1236|Gammaproteobacteria
EC1.14.12.19
DescriptionPart of the multicomponent 3-phenylpropionate dioxygenase. Converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively
Cds size1311
COG categoryP
BRITEbr01602,ko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185936.1684651-CDS-P-wetherbeei_contig1205:5022..63331683185936.1684651-CDS-P-wetherbeei_contig1205:5022..6333Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1205 5023..6333 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1205.5.1prot_P-wetherbeei_contig1205.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1205 5023..6333 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1205.5.1

>prot_P-wetherbeei_contig1205.5.1 ID=prot_P-wetherbeei_contig1205.5.1|Name=mRNA_P-wetherbeei_contig1205.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=437bp
MNKPTVGPFSQFVNTEEGWIDRRIFHDRDIYDAELEQIFARCWLFVAHES
QIPDAGDFLTTYMGEDAVIVSRRKDKGVGVFLNSCPHRGNRVCFADAGNT
RQFICNYHGWSFGNDGALMGMHEEYVYKQDPAFDKTRHGLVNARVETWKG
LVFATFADDAPSLKEYLGAFAWYLDMMLDTDEGGTEFVPGTVRNVLNCNW
KFPAENFHGDAYHVGWTHMAGSLAYGGKPFAGDQNTSFQMTSQGHGWESG
YDGSEMRGLGSMAIAQYVMQQRPLIERRLGPERAKMIGAIASVSMFPNFS
FLPGINTFRVWQPKGPDKTEIWAWALVNKNAPEEVKQDIRRFAMRSFSPS
GMLEMDDGENWESATRANKGVVTRRQKLHYAMNRLAPDGPANYPGRVRQG
QMGDNNQMAMYQRWADLMDAKSWADVPNRDAQKAAE*
back to top

mRNA from alignment at P-wetherbeei_contig1205:5023..6333+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1205.5.1 ID=mRNA_P-wetherbeei_contig1205.5.1|Name=mRNA_P-wetherbeei_contig1205.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig1205:5023..6333+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACAAACCCACCGTTGGCCCTTTCAGCCAATTTGTAAATACCGAAGA AGGCTGGATCGACCGGCGCATTTTTCATGACCGCGACATTTATGACGCGG AACTGGAGCAGATTTTTGCGCGCTGCTGGCTGTTTGTCGCCCACGAATCG CAAATTCCGGATGCGGGTGATTTTCTGACCACCTATATGGGCGAGGATGC GGTGATTGTGTCGCGGCGCAAGGACAAGGGCGTTGGGGTGTTTCTCAATA GCTGCCCGCATCGCGGCAACCGGGTGTGCTTTGCCGATGCAGGCAATACG CGGCAATTCATCTGCAATTATCATGGCTGGTCGTTCGGCAATGATGGCGC CCTGATGGGGATGCACGAAGAATATGTCTATAAGCAAGACCCGGCGTTTG ACAAGACCAGACATGGCCTGGTCAATGCGCGGGTGGAAACCTGGAAGGGC CTGGTGTTCGCCACCTTTGCCGATGATGCGCCGAGCCTGAAAGAATATCT GGGCGCCTTCGCCTGGTATCTCGACATGATGCTGGACACAGATGAAGGCG GCACAGAATTTGTTCCGGGCACGGTGCGCAATGTGCTGAACTGCAACTGG AAATTCCCGGCGGAAAATTTTCATGGCGACGCCTATCATGTGGGCTGGAC CCATATGGCGGGATCGCTCGCTTACGGCGGCAAGCCGTTTGCCGGTGATC AGAACACTTCGTTTCAGATGACATCGCAGGGCCATGGCTGGGAATCCGGT TATGACGGCAGCGAAATGCGCGGCCTTGGCAGCATGGCGATTGCGCAATA TGTGATGCAGCAACGCCCGCTCATCGAACGCCGCCTGGGGCCGGAACGGG CAAAGATGATCGGCGCCATCGCATCGGTCAGCATGTTCCCGAATTTCTCG TTTCTGCCCGGCATCAATACATTCCGCGTCTGGCAACCCAAAGGGCCGGA CAAGACGGAAATCTGGGCCTGGGCGCTGGTCAATAAAAATGCGCCAGAGG AAGTGAAGCAGGATATCCGCCGCTTCGCCATGCGGTCCTTTTCGCCCAGC GGCATGCTGGAAATGGATGACGGCGAAAACTGGGAAAGTGCGACCCGCGC CAACAAGGGCGTGGTGACGCGCCGCCAAAAACTGCATTACGCCATGAACC GGCTCGCCCCTGATGGGCCAGCCAATTATCCGGGCCGGGTGCGCCAGGGC CAGATGGGCGACAATAACCAGATGGCCATGTATCAGCGCTGGGCCGATCT GATGGACGCGAAAAGTTGGGCCGATGTGCCCAACCGCGATGCGCAAAAGG CGGCGGAGTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1205:5023..6333+

>mRNA_P-wetherbeei_contig1205.5.1 ID=mRNA_P-wetherbeei_contig1205.5.1|Name=mRNA_P-wetherbeei_contig1205.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig1205:5023..6333+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACAAACCCACCGTTGGCCCTTTCAGCCAATTTGTAAATACCGAAGA
AGGCTGGATCGACCGGCGCATTTTTCATGACCGCGACATTTATGACGCGG
AACTGGAGCAGATTTTTGCGCGCTGCTGGCTGTTTGTCGCCCACGAATCG
CAAATTCCGGATGCGGGTGATTTTCTGACCACCTATATGGGCGAGGATGC
GGTGATTGTGTCGCGGCGCAAGGACAAGGGCGTTGGGGTGTTTCTCAATA
GCTGCCCGCATCGCGGCAACCGGGTGTGCTTTGCCGATGCAGGCAATACG
CGGCAATTCATCTGCAATTATCATGGCTGGTCGTTCGGCAATGATGGCGC
CCTGATGGGGATGCACGAAGAATATGTCTATAAGCAAGACCCGGCGTTTG
ACAAGACCAGACATGGCCTGGTCAATGCGCGGGTGGAAACCTGGAAGGGC
CTGGTGTTCGCCACCTTTGCCGATGATGCGCCGAGCCTGAAAGAATATCT
GGGCGCCTTCGCCTGGTATCTCGACATGATGCTGGACACAGATGAAGGCG
GCACAGAATTTGTTCCGGGCACGGTGCGCAATGTGCTGAACTGCAACTGG
AAATTCCCGGCGGAAAATTTTCATGGCGACGCCTATCATGTGGGCTGGAC
CCATATGGCGGGATCGCTCGCTTACGGCGGCAAGCCGTTTGCCGGTGATC
AGAACACTTCGTTTCAGATGACATCGCAGGGCCATGGCTGGGAATCCGGT
TATGACGGCAGCGAAATGCGCGGCCTTGGCAGCATGGCGATTGCGCAATA
TGTGATGCAGCAACGCCCGCTCATCGAACGCCGCCTGGGGCCGGAACGGG
CAAAGATGATCGGCGCCATCGCATCGGTCAGCATGTTCCCGAATTTCTCG
TTTCTGCCCGGCATCAATACATTCCGCGTCTGGCAACCCAAAGGGCCGGA
CAAGACGGAAATCTGGGCCTGGGCGCTGGTCAATAAAAATGCGCCAGAGG
AAGTGAAGCAGGATATCCGCCGCTTCGCCATGCGGTCCTTTTCGCCCAGC
GGCATGCTGGAAATGGATGACGGCGAAAACTGGGAAAGTGCGACCCGCGC
CAACAAGGGCGTGGTGACGCGCCGCCAAAAACTGCATTACGCCATGAACC
GGCTCGCCCCTGATGGGCCAGCCAATTATCCGGGCCGGGTGCGCCAGGGC
CAGATGGGCGACAATAACCAGATGGCCATGTATCAGCGCTGGGCCGATCT
GATGGACGCGAAAAGTTGGGCCGATGTGCCCAACCGCGATGCGCAAAAGG
CGGCGGAGTAA
back to top