mRNA_P-wetherbeei_contig12027.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12027.2.1
Unique NamemRNA_P-wetherbeei_contig12027.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: UPI0019A082B3 (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019A082B3)

HSP 1 Score: 402 bits (1032), Expect = 9.560e-138
Identity = 201/312 (64.42%), Postives = 253/312 (81.09%), Query Frame = 1
Query:   40 VACVVHVTGA-WGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGLAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            VAC + +TGA   Q +P++P+RWVAPF PGGT+DIVAR VA++L+ ALGQ V ++NR GAGGNIAA+ VA+APADGYT+LTGFPGLAINPSLYAKL+YDPLKDLAPV L++SAPL++VV P   A+TVKE++A+A  +PG L+F SAGNG+SSHL GELFKS+A IDI HVPYKGS++ M DL+ GR+ LMINPLPEMIP V+SGKLRGIAV+ L+RS  MPD P ++E+ + G+EV+TWNG+M PA TP  ++ RLN EIV LLK+    + + E  L  I +TPE+F+  LR ET KWA+VVKASGARI+
Sbjct:    8 VACALAITGAAQAQTFPSKPLRWVAPFAPGGTSDIVARAVAQRLSAALGQPVNIENRAGAGGNIAADFVARAPADGYTLLTGFPGLAINPSLYAKLSYDPLKDLAPVTLMTSAPLILVVSPTTSAKTVKEVVALATAQPGTLNFCSAGNGTSSHLAGELFKSMAKIDIVHVPYKGSVECMADLMGGRISLMINPLPEMIPMVKSGKLRGIAVSSLQRSPSMPDTPPVSESGVKGYEVSTWNGVMVPAGTPAAVITRLNGEIVALLKSAELRRSLEEQSLTVIGNTPEEFSAFLRAETAKWAEVVKASGARIQ 319          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536UXV9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A536UXV9_9PROT)

HSP 1 Score: 344 bits (882), Expect = 7.460e-115
Identity = 168/311 (54.02%), Postives = 234/311 (75.24%), Query Frame = 1
Query:   43 ACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            AC+  V  A  Q YP RPIR V PFP GGTTDI+AR VA+KLTE LGQ V +DNRPGA GNI +++VAK+  DGYT+L G  G  AINPSLY+K+ YD +KD APV+L++  P ++VV+PALP  +V +LI +AK +PG+++F S+G+G+S HL GELFK++AG+D+ HVPYKGS   + DLI G++Q+M + LP  +P ++ G+LR IAV  LKR+ V+PD+PTI E+ LPGFE ++W G++APAATP  +VAR+N E+ K L++    +++   G +    +PE+FA H+R E++KWAKVVKASGA+++
Sbjct:   19 ACIATVASA--QGYPTRPIRLVVPFPAGGTTDILAREVAQKLTEVLGQAVVVDNRPGAAGNIGSDLVAKSAPDGYTLLMGTVGTHAINPSLYSKMPYDHVKDFAPVVLVAGVPNVLVVNPALPVNSVSDLIKLAKDKPGQINFASSGSGTSIHLSGELFKTMAGVDMTHVPYKGSSPALTDLIGGQVQIMFDNLPSALPQIKGGRLRAIAVTSLKRAPVLPDIPTINESGLPGFEASSWFGVLAPAATPAAVVARINTEVNKWLQSADAREKLLGQGAEAAGGSPERFANHIRAESEKWAKVVKASGAKVD 327          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A1F4DWR9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DWR9_9PROT)

HSP 1 Score: 344 bits (882), Expect = 7.710e-115
Identity = 168/300 (56.00%), Postives = 227/300 (75.67%), Query Frame = 1
Query:   76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTG-FPGLAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            QAYP +PIR + PFPPGGTTD+VAR+VA+KLTEA GQQV +DNRPGAGG I  EIVAKA  DGYTVL G     A+NP+LY KLN+DP+KD APV L+ S+P L+ VHP++ A++VKELIA+AK +PG+L++ SAG G+S HL  ELFKS+AGID+ HVPYKG+   + DLI G++Q+MI  +  ++P ++SGKLRG+ V   KR + +PDLPTIAE+ +PGF+V++W G+  P  TPK IVA++NAEI K+L+ P   +R+   G D  ++TPE+FA +++ E  KW KV + +G R +
Sbjct:   29 QAYPTKPIRMICPFPPGGTTDVVARLVAQKLTEAWGQQVVVDNRPGAGGIIGTEIVAKAAPDGYTVLLGSITTHAVNPALYKKLNFDPVKDFAPVSLVVSSPQLLAVHPSVAAKSVKELIALAKAKPGQLNYASAGTGTSPHLTFELFKSMAGIDVVHVPYKGTGPAITDLIGGQVQMMITGVVALMPHIKSGKLRGLGVTSAKRVAALPDLPTIAESGIPGFDVSSWFGVFLPGGTPKPIVAKMNAEIRKILEVPEVRQRLISQGADPASNTPEEFAAYVKAEMAKWGKVARDTGTRAD 328          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536TWK9_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TWK9_9PROT)

HSP 1 Score: 341 bits (874), Expect = 1.220e-113
Identity = 167/308 (54.22%), Postives = 230/308 (74.68%), Query Frame = 1
Query:   52 VHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            V V+GAW QAYP RPIR V PFP GGTTDI+AR V ++L+  LGQ V +DNRPGA GNI A++VAK+  DGYT+L G  G  AIN SLYAK+ YD +KD APVIL++  P ++ V+PALP  +V +LI +AK +PG+++F S+G+G+S HL GELFK++AG+D+ HVPYKGS   + DLI G++Q+M + LP  + F+++GKLR IAV   KR+  +PD+PTIAE+ LPGFE ++W G++APA TP  I+AR+N ++ + L++    +++   G      TPEQFA H+R ET+KWAKVVKASGA+++
Sbjct:   20 VCVSGAWAQAYPTRPIRLVVPFPAGGTTDILAREVGQRLSMTLGQPVVIDNRPGAAGNIGADLVAKSAPDGYTLLMGTVGTHAINASLYAKMPYDHVKDFAPVILVAGVPNVLEVNPALPVNSVADLIKLAKAKPGQINFASSGSGTSIHLSGELFKTMAGVDMTHVPYKGSAPAITDLIGGQVQVMFDNLPSSLQFIKAGKLRAIAVTSAKRAPALPDVPTIAESGLPGFEASSWFGIVAPAGTPPAIIARINNDVDQWLQSSEAKEKLLAQGAIPAGGTPEQFAAHIRAETEKWAKVVKASGAKVD 327          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: UPI001FAB6256 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FAB6256)

HSP 1 Score: 341 bits (874), Expect = 1.350e-113
Identity = 162/315 (51.43%), Postives = 230/315 (73.02%), Query Frame = 1
Query:   28 GACAVACVVHVTGAWGQA-YPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGLAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAETLPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            G C  +  +   GA  QA YP++PI+ V PF  GGTT I+AR++AE++ + LGQ + +DNRPGAGGN+  ++VAKA  DGYT+L G  GLAINP+LYAK+ +DPLKDLAPV L +  P L+VVHPA+PA  VKEL+A AK  PG+L++ S GNG+SSHL  E+ KS AGIDI HVPYKG    M DLI G++ ++ + +P ++P V+ G++R + V+ LKRS+  P++P I+E LPGF++T W G +AP  TPK+++ARLNAE+++ LK PA   ++  +G+  + S+P++F   +R ET +WAKVVK SGA+++
Sbjct:   16 GLCGASLALLAGGAQAQAAYPSKPIKLVVPFAAGGTTSILARLLAERMGQGLGQTIVVDNRPGAGGNVGMDLVAKAEPDGYTILMGPIGLAINPALYAKMPFDPLKDLAPVGLYAGVPNLLVVHPAVPAANVKELVAYAKAHPGKLNYASNGNGTSSHLAAEMLKSAAGIDITHVPYKGGGPAMQDLIGGQVNMLFDQMPAVLPQVQGGRVRALGVSSLKRSAAAPEIPAISEALPGFDMTVWFGFLAPRGTPKDVIARLNAEMLRALKEPAFQAQLASMGVTPMPSSPDEFGSFMRSETTRWAKVVKDSGAKLD 330          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A1F6VI37_9PROT (Uncharacterized protein n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6VI37_9PROT)

HSP 1 Score: 339 bits (869), Expect = 7.220e-113
Identity = 164/300 (54.67%), Postives = 225/300 (75.00%), Query Frame = 1
Query:   76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
             AYP++ IR V PF  GGTTDI+AR + +KL+E  GQQV +DNR GAGGNI A++VAK+  DGYT+L G  G  AINPSLYAK+ +D LKD  P+  +++   ++VVHP++PA++V ELIA+AK +PG+L+F S+GNG+S HL GELFK++ G+D+ H+PYKGS   + DL+ G++ LM + LP  +P +++GKLR + V   KR+  +PD PTIAE  +PGFE T+W G+ APA TPKE+VARL+ EIVK L +P T +R++  G D I +TPEQFA ++  ET KWAKVVKASGA+++
Sbjct:   29 DAYPSKSIRMVVPFNAGGTTDILARAIGQKLSEVFGQQVVVDNRAGAGGNIGADVVAKSAPDGYTLLMGTVGTHAINPSLYAKMPFDHLKDFVPITQVAAVSNVLVVHPSVPAKSVAELIALAKAKPGKLNFASSGNGTSIHLSGELFKTLTGVDMVHIPYKGSAPAITDLLGGQVNLMFDNLPSALPHIKTGKLRALGVTSSKRAPALPDAPTIAEAGVPGFEATSWFGVFAPAGTPKEVVARLHKEIVKALNSPDTKERLSGQGADLIGNTPEQFAAYIAAETTKWAKVVKASGAKVD 328          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A6N9R4T9_9RHOO (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Aromatoleum sp. TaxID=2307007 RepID=A0A6N9R4T9_9RHOO)

HSP 1 Score: 338 bits (868), Expect = 1.020e-112
Identity = 174/322 (54.04%), Postives = 230/322 (71.43%), Query Frame = 1
Query:   10 KLITVVGACAVACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            + +T   A A   +  V GA   AYP++PIR V PFP GGTTDI+AR VA+KLTEA GQ V +DNRPGAGGNI +E+VAKA ADGYT+  G  G  AINPSLYAK+ YD +KD APVIL++  P ++VV+P +P  +V ELIA AK  PG+L+F S+G+G+S HL GELFK ++G D+ HVPYKGS   + DLI G++QLM + LP  +P + +GKLR +AV    R++ +PD PTIAE+ LPGFE ++W G++APA T   IV++LNAEI K L +P   ++M   G +    +PE FA H++ ET KWAKVVK SGA+++
Sbjct:    7 RALTGFAAAAALSLTSVAGAQTPAYPSKPIRLVVPFPAGGTTDILARAVAQKLTEAWGQPVVVDNRPGAGGNIGSELVAKAAADGYTLEMGTVGTHAINPSLYAKMPYDHVKDFAPVILVAGVPNVLVVNPGVPVHSVAELIAYAKTHPGKLNFASSGSGTSIHLSGELFKVMSGADMMHVPYKGSAPALADLIGGQVQLMFDNLPSSLPQIRAGKLRALAVTSGTRAAALPDTPTIAESGLPGFEASSWFGVLAPAGTSPAIVSKLNAEIAKWLASPEAKEKMQSQGANAAGGSPEDFARHIQAETAKWAKVVKDSGAKVD 328          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A1F4DTI3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DTI3_9PROT)

HSP 1 Score: 338 bits (867), Expect = 1.190e-112
Identity = 170/313 (54.31%), Postives = 224/313 (71.57%), Query Frame = 1
Query:   37 AVACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGL-AINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAET-LPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            AV   +  + A  QAYP +P+R V PFP GG TDIV R++A+KL+E+ GQQV +DNR GAGG I ++I AK+  DGYT+L G     AI PSLY+KL YDP++D APV L++SA +L+ VHP++PA+ V++LIA+AKR+P  LSF S+GNG  SHL GE FKSV GI + HVPYKG    +VDL+SG++ LM       +P+V++G+L  +AV   KRS + PD+PT+AE+ LPGFE   W G+  PA   KEIVARLN EIVK+++ P   +RMT LG D + STPEQFA   + +T KWA+VVK SGA+IE
Sbjct:   10 AVLLAIASSAAVAQAYPVKPVRMVVPFPAGGATDIVGRLIAQKLSESWGQQVIVDNRGGAGGTIGSDIAAKSAPDGYTMLVGTSSTHAIAPSLYSKLPYDPVRDFAPVTLVASATILLAVHPSVPAKNVRDLIALAKRKPNALSFASSGNGGISHLIGEHFKSVGGIQMLHVPYKGDTPALVDLVSGQVHLMFGTAVSFLPYVKAGRLNALAVTNPKRSPIAPDVPTVAESGLPGFEALQWFGIFVPAGASKEIVARLNGEIVKIVRLPDIRERMTSLGADVVGSTPEQFAAFQKTDTAKWARVVKESGAKIE 322          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536XPA0_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XPA0_9PROT)

HSP 1 Score: 337 bits (865), Expect = 2.730e-112
Identity = 164/300 (54.67%), Postives = 224/300 (74.67%), Query Frame = 1
Query:   76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPG-LAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAE-TLPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
             AYP++P+R+V  FPPGG TDI+AR +A++LT  L QQV +DNRPGAGGNI  +IVAK+  DG+T+L G  G LAIN SL+ K+ +DP++DLAPV L +S P ++VVHP+L A TV+ELIA+AK RPGE++F S+G+G+ +HL GELF S+AG+ + HVPYKG+   + DL+ G++QLM + +P  +P V+ GKLR +AV   KRS   P+LPT+ E  LPGFE  TW+G++ PA TP  IVARLN EIV +L  P  ++R++  G + + STPE+FA ++R ET KWAKVV+ SGA+ E
Sbjct:   27 DAYPSKPVRFVVAFPPGGGTDIIARSIAQRLTVRLAQQVVVDNRPGAGGNIGTDIVAKSAPDGHTLLMGSAGPLAINASLFGKMPFDPIRDLAPVTLAASTPNVLVVHPSLRAATVRELIALAKARPGEINFASSGHGTPAHLAGELFNSMAGVKMVHVPYKGAAPALADLLGGQVQLMFSTMPPALPHVKDGKLRALAVTSAKRSPATPELPTVDEIALPGFEANTWHGVVVPAGTPAAIVARLNREIVAILHLPEVVERLSAQGAEAVGSTPEEFAAYIRSETAKWAKVVRDSGAKAE 326          
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Match: A0A536Y8U6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y8U6_9PROT)

HSP 1 Score: 335 bits (859), Expect = 2.140e-111
Identity = 164/300 (54.67%), Postives = 221/300 (73.67%), Query Frame = 1
Query:   76 QAYPARPIRWVAPFPPGGTTDIVARIVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPG-LAINPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRRPGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRMQLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAE-TLPGFEVTTWNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQFAEHLRRETDKWAKVVKASGARIE 969
            +AYPA+P+R+V  FPPGG TDI+AR +A+KL E + QQV +DNRPGAGGNI  ++VAK+  DGYT+L G  G LAIN SL+ K+ +DP+KDLAPV L +S P L+VVHP+L   +VKELIA+AK RPGE+ F S+G+G+ +HL GELF S+AG+ + HVPYKG+   + DL+ G++QLM + +P  +P V+ GKLR +AV   KRS   P+LPT+ E  L GFE  TW+G++ PA TP  IVARLN EIV +L  P  ++R +  G + + STPE+FA +++ ET KWAKVV+ SGA+ E
Sbjct:   26 EAYPAKPVRFVVAFPPGGGTDIIARSIAQKLAERIAQQVVVDNRPGAGGNIGTDMVAKSAPDGYTLLMGSAGPLAINASLFGKMPFDPIKDLAPVTLAASTPNLLVVHPSLRVASVKELIALAKARPGEIDFASSGHGTPAHLAGELFNSMAGVKMVHVPYKGAAPALADLLGGQVQLMFSTMPPALPHVKDGKLRALAVTSAKRSPAAPELPTVGEIALRGFEANTWHGVVVPAGTPGAIVARLNREIVAILHLPDVVERFSSQGAEALGSTPEEFAAYIKSETLKWAKVVRDSGAKAE 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12027.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019A082B39.560e-13864.42Tripartite tricarboxylate transporter substrate bi... [more]
A0A536UXV9_9PROT7.460e-11554.02Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F4DWR9_9PROT7.710e-11556.00Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A536TWK9_9PROT1.220e-11354.22Tripartite tricarboxylate transporter substrate bi... [more]
UPI001FAB62561.350e-11351.43tripartite tricarboxylate transporter substrate bi... [more]
A0A1F6VI37_9PROT7.220e-11354.67Uncharacterized protein n=1 Tax=Candidatus Muprote... [more]
A0A6N9R4T9_9RHOO1.020e-11254.04Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F4DTI3_9PROT1.190e-11254.31Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A536XPA0_9PROT2.730e-11254.67Tripartite tricarboxylate transporter substrate bi... [more]
A0A536Y8U6_9PROT2.140e-11154.67Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12027contigP-wetherbeei_contig12027:872..1843 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog232721.Ajs_3974
PFAMsTctC
Model size972
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.17e-109
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VHK8@28216|Betaproteobacteria,4A9R8@80864|Comamonadaceae
DescriptionPFAM conserved
Cds size972
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185935.4600499-CDS-P-wetherbeei_contig12027:871..18431683185935.4600499-CDS-P-wetherbeei_contig12027:871..1843Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12027 872..1843 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12027.2.1prot_P-wetherbeei_contig12027.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12027 872..1843 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12027.2.1

>prot_P-wetherbeei_contig12027.2.1 ID=prot_P-wetherbeei_contig12027.2.1|Name=mRNA_P-wetherbeei_contig12027.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=324bp
MRVKLITVVGACAVACVVHVTGAWGQAYPARPIRWVAPFPPGGTTDIVAR
IVAEKLTEALGQQVTLDNRPGAGGNIAAEIVAKAPADGYTVLTGFPGLAI
NPSLYAKLNYDPLKDLAPVILISSAPLLMVVHPALPARTVKELIAIAKRR
PGELSFPSAGNGSSSHLGGELFKSVAGIDIQHVPYKGSMQGMVDLISGRM
QLMINPLPEMIPFVESGKLRGIAVAGLKRSSVMPDLPTIAETLPGFEVTT
WNGLMAPAATPKEIVARLNAEIVKLLKAPATMKRMTELGLDTIASTPEQF
AEHLRRETDKWAKVVKASGARIE*
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mRNA from alignment at P-wetherbeei_contig12027:872..1843+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12027.2.1 ID=mRNA_P-wetherbeei_contig12027.2.1|Name=mRNA_P-wetherbeei_contig12027.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig12027:872..1843+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGTAAAACTGATTACCGTTGTTGGCGCGTGCGCCGTTGCTTGCGT GGTGCACGTCACCGGCGCATGGGGGCAGGCATATCCCGCGCGCCCGATAC GCTGGGTTGCGCCATTTCCGCCGGGCGGGACGACGGATATCGTCGCGCGC ATCGTTGCGGAGAAACTCACGGAGGCGCTCGGGCAGCAGGTCACGCTCGA CAACCGGCCCGGCGCGGGCGGCAACATCGCCGCCGAGATCGTGGCCAAGG CGCCGGCCGACGGCTACACCGTGCTCACCGGGTTTCCCGGCCTCGCGATC AATCCGAGCCTTTATGCAAAGCTGAATTACGACCCGCTCAAGGATCTGGC GCCGGTGATTCTGATTTCATCGGCGCCGCTGCTGATGGTCGTGCATCCGG CGCTGCCGGCGCGAACCGTCAAGGAGTTGATCGCGATCGCCAAGCGCCGG CCGGGCGAATTGTCGTTTCCTTCCGCGGGCAATGGCTCGTCGTCGCATCT CGGCGGCGAATTGTTCAAGAGCGTTGCCGGCATCGATATACAACACGTTC CGTACAAGGGTTCGATGCAGGGCATGGTCGATTTGATCAGCGGGCGCATG CAGCTCATGATAAATCCGCTGCCGGAGATGATTCCGTTCGTCGAGAGCGG CAAGTTGCGCGGGATTGCAGTCGCCGGGCTGAAGCGCTCGAGCGTCATGC CCGACCTGCCGACCATCGCCGAGACGCTCCCCGGATTCGAAGTCACCACC TGGAACGGCTTGATGGCGCCGGCCGCAACGCCGAAGGAAATCGTCGCCCG GCTCAATGCAGAGATCGTCAAGCTGCTCAAGGCGCCGGCGACAATGAAAC GCATGACCGAGCTGGGTCTCGATACGATTGCGAGCACGCCGGAGCAGTTC GCGGAGCACCTGCGCAGGGAAACCGACAAATGGGCGAAGGTCGTGAAAGC GTCGGGCGCCCGCATCGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12027:872..1843+

>mRNA_P-wetherbeei_contig12027.2.1 ID=mRNA_P-wetherbeei_contig12027.2.1|Name=mRNA_P-wetherbeei_contig12027.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig12027:872..1843+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGTAAAACTGATTACCGTTGTTGGCGCGTGCGCCGTTGCTTGCGT
GGTGCACGTCACCGGCGCATGGGGGCAGGCATATCCCGCGCGCCCGATAC
GCTGGGTTGCGCCATTTCCGCCGGGCGGGACGACGGATATCGTCGCGCGC
ATCGTTGCGGAGAAACTCACGGAGGCGCTCGGGCAGCAGGTCACGCTCGA
CAACCGGCCCGGCGCGGGCGGCAACATCGCCGCCGAGATCGTGGCCAAGG
CGCCGGCCGACGGCTACACCGTGCTCACCGGGTTTCCCGGCCTCGCGATC
AATCCGAGCCTTTATGCAAAGCTGAATTACGACCCGCTCAAGGATCTGGC
GCCGGTGATTCTGATTTCATCGGCGCCGCTGCTGATGGTCGTGCATCCGG
CGCTGCCGGCGCGAACCGTCAAGGAGTTGATCGCGATCGCCAAGCGCCGG
CCGGGCGAATTGTCGTTTCCTTCCGCGGGCAATGGCTCGTCGTCGCATCT
CGGCGGCGAATTGTTCAAGAGCGTTGCCGGCATCGATATACAACACGTTC
CGTACAAGGGTTCGATGCAGGGCATGGTCGATTTGATCAGCGGGCGCATG
CAGCTCATGATAAATCCGCTGCCGGAGATGATTCCGTTCGTCGAGAGCGG
CAAGTTGCGCGGGATTGCAGTCGCCGGGCTGAAGCGCTCGAGCGTCATGC
CCGACCTGCCGACCATCGCCGAGACGCTCCCCGGATTCGAAGTCACCACC
TGGAACGGCTTGATGGCGCCGGCCGCAACGCCGAAGGAAATCGTCGCCCG
GCTCAATGCAGAGATCGTCAAGCTGCTCAAGGCGCCGGCGACAATGAAAC
GCATGACCGAGCTGGGTCTCGATACGATTGCGAGCACGCCGGAGCAGTTC
GCGGAGCACCTGCGCAGGGAAACCGACAAATGGGCGAAGGTCGTGAAAGC
GTCGGGCGCCCGCATCGAGTAG
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