mRNA_P-wetherbeei_contig12027.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A520G3A6_9BURK (Uncharacterized protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520G3A6_9BURK) HSP 1 Score: 59.7 bits (143), Expect = 1.630e-10 Identity = 36/61 (59.02%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 22 LLVASALLSGCVIEPAYRGS-YHGS-SYGQRD---------RDHDGVPNRYDRAPNNPYRY 171 LLVASA L+GCV P G YHG YG RD RD DGVPNRYDR P+NPYRY Sbjct: 10 LLVASATLAGCVAVPYDSGRRYHGGYGYGDRDGRAYRSDRDRDSDGVPNRYDRRPDNPYRY 70
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: UPI00188BE930 (hypothetical protein n=2 Tax=Noviherbaspirillum TaxID=1344552 RepID=UPI00188BE930) HSP 1 Score: 58.9 bits (141), Expect = 3.210e-10 Identity = 35/69 (50.72%), Postives = 39/69 (56.52%), Query Frame = 1 Query: 1 MKTAIACLLVASALLSGCVIEPA-------YRGSYHG-----SSYGQRDRDHDGVPNRYDRAPNNPYRY 171 M+ I L AS LLSGCV+ P YR +HG RDRD DG+PNRYDRAP NPYRY Sbjct: 1 MRKLILPLAAASILLSGCVVAPYDPVGPGYYRQPHHGYXXXXXXXXXRDRDGDGIPNRYDRAPGNPYRY 69
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A3A3FM50_9BURK (Uncharacterized protein n=1 Tax=Noviherbaspirillum saxi TaxID=2320863 RepID=A0A3A3FM50_9BURK) HSP 1 Score: 58.2 bits (139), Expect = 6.010e-10 Identity = 33/67 (49.25%), Postives = 37/67 (55.22%), Query Frame = 1 Query: 1 MKTAIACLLVASALLSGCVIEPAYRGSYH----------GSSYGQRDRDHDGVPNRYDRAPNNPYRY 171 MK + + A LLSGC+ P H G SY +RDRD DGVPNRYDR PNNPYRY Sbjct: 1 MKKLVLSIAAACGLLSGCIAVPVSDAGVHVSGTVRSGSAGHSY-RRDRDGDGVPNRYDRRPNNPYRY 66
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A0Q7CUI9_9BURK (Uncharacterized protein n=3 Tax=Variovorax TaxID=34072 RepID=A0A0Q7CUI9_9BURK) HSP 1 Score: 57.8 bits (138), Expect = 9.400e-10 Identity = 33/69 (47.83%), Postives = 37/69 (53.62%), Query Frame = 1 Query: 1 MKTAIACLLVASALLSGCVIEPAYRGSYHGSSYGQRDRDHDGVPNRYDRA-------------PNNPYR 168 M +A LL ASA+L+GCV+ P G YG RDRD DGVPNRYD PNNPYR Sbjct: 1 MTKILAILLAASAILAGCVVAPYDNPPPRGQHYGNRDRDRDGVPNRYDXXXXXXXXXXXXXXXPNNPYR 69
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A4Q3IX64_9BURK (Uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium TaxID=1871070 RepID=A0A4Q3IX64_9BURK) HSP 1 Score: 57.0 bits (136), Expect = 1.760e-9 Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 1 Query: 1 MKTAIACLLVASALLSGCVIEPAYRGSYHGSSYGQ----------RDRDHDGVPNRYDRAPNNPYRY 171 MK + L A+ LLSGC+ P G+ + SY + RDRD DGVPNRYDRAP NPYRY Sbjct: 1 MKKLLIPLASAALLLSGCIAVPYNAGAGYHRSYDREPYSAPSRHYRDRDRDGVPNRYDRAPANPYRY 67
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A0Q8R764_9BURK (Uncharacterized protein n=1 Tax=Noviherbaspirillum sp. Root189 TaxID=1736487 RepID=A0A0Q8R764_9BURK) HSP 1 Score: 56.6 bits (135), Expect = 2.560e-9 Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = 1 Query: 1 MKTAIACLLVASALLSGCVIEPAYRGSYHGSSYGQ----------RDRDHDGVPNRYDRAPNNPYRY 171 MK + CL AS+LL+GC+ P G + + + RDRD DGV NRYDR PNNPYRY Sbjct: 2 MKKLMLCLAAASSLLTGCIAVPVSDGGVYVTGTARATDGHPRRYSRDRDGDGVQNRYDRRPNNPYRY 68
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A2E9BTI6_9BURK (Uncharacterized protein n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A2E9BTI6_9BURK) HSP 1 Score: 53.9 bits (128), Expect = 6.840e-8 Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 1 Query: 82 YHGSSYGQRDRDHDGVPNRYDRAPNNPYRY 171 Y G YG+RD D DGVPNRYDR PNNPYRY Sbjct: 75 YDGRRYGRRDNDGDGVPNRYDRRPNNPYRY 104
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A4Z0CBK8_9BURK (Uncharacterized protein n=1 Tax=Ramlibacter humi TaxID=2530451 RepID=A0A4Z0CBK8_9BURK) HSP 1 Score: 52.8 bits (125), Expect = 7.950e-8 Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 1 Query: 43 LSGCVIEP----AYRGSYHGSSYGQ--RDRDHDGVPNRYDRAPNNPYRY 171 L+GCVI P A RG Y+ S + RD D DGVPNRYDR PN+PYRY Sbjct: 17 LTGCVIAPVEPVAVRGGYYHSPPPRAWRDNDGDGVPNRYDRRPNDPYRY 65
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: A0A6P2EJF5_9BURK (Uncharacterized protein n=6 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2EJF5_9BURK) HSP 1 Score: 52.8 bits (125), Expect = 9.150e-8 Identity = 34/71 (47.89%), Postives = 39/71 (54.93%), Query Frame = 1 Query: 1 MKTAIACLLVASALLSGCVIEPAYRG-SYHGSSYGQRDRDHDGVPNRYDRA-------------PNNPYRY 171 MKT +A L+ A+A L+GCV P G S +SYG RDRD DGVPNRY PNNP RY Sbjct: 1 MKTLVALLIAATAALAGCVAVPYDSGRSPPRASYGDRDRDRDGVPNRYXXXXXXXXXXXXXXSRPNNPNRY 71
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Match: UPI001B0E967C (Uncharacterized protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=UPI001B0E967C) HSP 1 Score: 51.2 bits (121), Expect = 3.230e-7 Identity = 32/66 (48.48%), Postives = 39/66 (59.09%), Query Frame = 1 Query: 1 MKTAIACLLVASALLSGCVIEPAYRGSYHGSSYGQ---------RDRDHDGVPNRYDRAPNNPYRY 171 MK ++A LL A+AL +GCV P G + Y + RD D DGVPNRYDR P+NPYRY Sbjct: 1 MKASLAFLLAAAAL-TGCVAVPYDAGPPPRAHYDRPXXXXXRAMRDDDRDGVPNRYDRRPDNPYRY 65 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12027.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12027.1.1 >prot_P-wetherbeei_contig12027.1.1 ID=prot_P-wetherbeei_contig12027.1.1|Name=mRNA_P-wetherbeei_contig12027.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp MKTAIACLLVASALLSGCVIEPAYRGSYHGSSYGQRDRDHDGVPNRYDRAback to top mRNA from alignment at P-wetherbeei_contig12027:413..586- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12027.1.1 ID=mRNA_P-wetherbeei_contig12027.1.1|Name=mRNA_P-wetherbeei_contig12027.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig12027:413..586- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12027:413..586- >mRNA_P-wetherbeei_contig12027.1.1 ID=mRNA_P-wetherbeei_contig12027.1.1|Name=mRNA_P-wetherbeei_contig12027.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig12027:413..586- (Phaeothamnion wetherbeei SAG_119_79)back to top |