mRNA_P-wetherbeei_contig1202.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: A0A6H5JLL6_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL6_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 3.160e-15 Identity = 54/74 (72.97%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 643 RQSTSFVAAAARAVSPAVCRIDIERYV-TTFDDLPFDFSRPPDVEQGQGSGVIFSP-DGLVLTNAHVVAGADKV 858 R STSFVA AARAVSPAVCRID+ER V T D PF DVE GQGSG+IFS DGLVLTNAHVVAGA KV Sbjct: 662 RHSTSFVAVAARAVSPAVCRIDMERLVGTRLDGSPF-----TDVETGQGSGLIFSSEDGLVLTNAHVVAGARKV 730
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: D8LTB3_ECTSI (Trypsin-like serine protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB3_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 3.730e-15 Identity = 54/74 (72.97%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 643 RQSTSFVAAAARAVSPAVCRIDIERYV-TTFDDLPFDFSRPPDVEQGQGSGVIFSP-DGLVLTNAHVVAGADKV 858 R STSFVA AARAVSPAVCRID+ER V T D PF DVE GQGSG+IFS DGLVLTNAHVVAGA KV Sbjct: 680 RHSTSFVAVAARAVSPAVCRIDMERLVGTRHDGSPF-----TDVETGQGSGLIFSSEDGLVLTNAHVVAGARKV 748
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: A0A7S3DQV5_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQV5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.240e-9 Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 640 RRQSTSFVAAAARAVSPAVCRIDIERYVTTFDDLPF----DFSR-------PPDVEQGQGSGVIFSPDGLVLTNAHVVAGADKV 858 R+ + SFV A V PAV RID E ++ + DD+P FS PP V+QGQGSG+I S DGLVLTNAHVV A KV Sbjct: 476 RQMALSFVTEAVDKVGPAVLRIDTESHLASSDDMPLLSPQPFSGNGPANQPPPMVQQGQGSGLIISSDGLVLTNAHVVEDATKV 559
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: A0A7S0ZG40_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG40_9RHOD) HSP 1 Score: 70.5 bits (171), Expect = 1.670e-9 Identity = 46/88 (52.27%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 640 RRQSTSFVAAAARAVSPAVCRIDIERYVTT------FDDLPFDFSRPPDV---------EQGQGSGVIFSPDGLVLTNAHVVAGADKV 858 +RQ+TSFV AA RAV PAV RID ER VT F+D F D+ E+GQGSG I S DGLV+TNAHVV A+KV Sbjct: 191 KRQTTSFVTAAVRAVGPAVVRIDTERTVTNTGLDPLFEDPLFKKFFGDDLQKQIPKERTERGQGSGFIISRDGLVVTNAHVVKDAEKV 278
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: A0A7S0IP79_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IP79_9EUKA) HSP 1 Score: 70.1 bits (170), Expect = 1.870e-9 Identity = 44/84 (52.38%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 628 PTGVRRQSTSFVAAAARAVSPAVCRIDIERYVTTFDDLPFDFSRPPDVEQ-------GQGSGVIFSPDGLVLTNAHVVAGADKV 858 P + R+ TSFV AA AV PAV RID ER V D P D P +E GQGSGVI S DGL++TNAHVV A KV Sbjct: 107 PAAIPRKKTSFVTAAVEAVGPAVVRIDTERLV---DRAPLDSYFFPGLEPDGQRKETGQGSGVILSDDGLIMTNAHVVKNAAKV 187
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: A0A7S1TJS6_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJS6_9RHOD) HSP 1 Score: 70.1 bits (170), Expect = 2.040e-9 Identity = 48/99 (48.48%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 613 PLFPAPTGVRRQSTSFVAAAARAVSPAVCRIDIERYV-----------TTF-----DDLPFDFSRPPD-VEQGQGSGVIFSPDGLVLTNAHVVAGADKV 858 P+ A +G + S SFV+ A RAV PAV RID ER + TF D++P +P D +E+GQGSGVI S DGL+LTNAHVVA A+KV Sbjct: 123 PMEQAKSGTAKNSASFVSRAVRAVGPAVVRIDTERTIHAPSLDPLFEDPTFKRFFGDEIPN--MQPKDRLERGQGSGVIVSKDGLLLTNAHVVADAEKV 219
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: K9YDG2_HALP7 (HtrA2 peptidase n=1 Tax=Halothece sp. (strain PCC 7418) TaxID=65093 RepID=K9YDG2_HALP7) HSP 1 Score: 69.7 bits (169), Expect = 2.070e-9 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 589 PMAPPPLPPLFPAPTGVRRQSTSFVAAAARAVSPAVCRIDIERYVTTFDDLPFDFSR------PPD---VEQGQGSGVIFSPDGLVLTNAHVVAGADKV 858 P+ P LP PT +++SF+A AA+ V PAV R+D R V+ + PF + R PPD V +G GSG IFS DGLVLTNAHVV AD+V Sbjct: 41 PVQPIQLPDASSRPTNPPLENSSFIARAAQTVGPAVVRLDSARIVSQKEQEPF-YRRFFGEESPPDRRRVREGTGSGFIFSSDGLVLTNAHVVEDADEV 138
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: A0A7S3EMR9_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMR9_9RHOD) HSP 1 Score: 67.4 bits (163), Expect = 6.190e-9 Identity = 43/98 (43.88%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 607 LPPLFPAPTGVRRQSTSFVAAAARAVSPAVCRIDIERYVTTFDDLPF------------DFSRPPD--VEQGQGSGVIFSPDGLVLTNAHVVAGADKV 858 LPP+ + ++QS+SFV A ++V P+V RID ER VT + P + ++ P +E+GQGSG I S DGL++TNAHVV GADKV Sbjct: 142 LPPITLQESHKKKQSSSFVTRAVQSVGPSVVRIDTERTVTAGNMDPLLEDPLFKKFFGDELNKVPRERLERGQGSGFIISTDGLLITNAHVVKGADKV 239
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: UPI00145C7243 (trypsin-like peptidase domain-containing protein n=1 Tax=Brasilonema sp. UFV-L1 TaxID=2234130 RepID=UPI00145C7243) HSP 1 Score: 67.4 bits (163), Expect = 1.280e-8 Identity = 42/93 (45.16%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 622 PAPTGVRRQSTSFVAAAARAVSPAVCRIDIERYVTTFDDLPF------------DFSRPPDV--EQGQGSGVIFSPDGLVLTNAHVVAGADKV 858 PA T + SFV+AA V PAV RID ER +T PF FSR P ++G+GSG I P+G++LTNAHVV+GAD V Sbjct: 67 PAATSQKASIRSFVSAAVNRVGPAVVRIDTERTITMRTPDPFFSXXXXXXXXXXXFSRVPQEYHQRGEGSGFIIDPNGMILTNAHVVSGADSV 159
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Match: A0A7S2DS23_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DS23_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 1.520e-8 Identity = 44/85 (51.76%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 625 APTGVRRQSTSFVAAAARAVSPAVCRIDIERYVTTFDDLPFDFSRPPDVE-------QGQGSGVIFSPDGLVLTNAHVVAGADKV 858 AP RRQ TSFV AA +V PAV RID ER V D P + P +E GQGSGVI + GL+LTNAHVV A KV Sbjct: 144 APKAARRQKTSFVTAAVSSVGPAVVRIDTERLV---DRQPLEGYLFPGLEPEGQRRESGQGSGVILTEAGLILTNAHVVKNAAKV 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1202.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1202.1.1 >prot_P-wetherbeei_contig1202.1.1 ID=prot_P-wetherbeei_contig1202.1.1|Name=mRNA_P-wetherbeei_contig1202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp MRMTSGDAAATSGDPVPDGEPMQDNESSASVAPPPPKRSWLHFRRTYGFIback to top mRNA from alignment at P-wetherbeei_contig1202:2..1168- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1202.1.1 ID=mRNA_P-wetherbeei_contig1202.1.1|Name=mRNA_P-wetherbeei_contig1202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig1202:2..1168- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1202:2..1168- >mRNA_P-wetherbeei_contig1202.1.1 ID=mRNA_P-wetherbeei_contig1202.1.1|Name=mRNA_P-wetherbeei_contig1202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig1202:2..1168- (Phaeothamnion wetherbeei SAG_119_79)back to top |