mRNA_P-wetherbeei_contig12007.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12007.1.1
Unique NamemRNA_P-wetherbeei_contig12007.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A7K1B727_9ACTN (TIGR01777 family protein n=2 Tax=root TaxID=1 RepID=A0A7K1B727_9ACTN)

HSP 1 Score: 392 bits (1006), Expect = 1.460e-134
Identity = 205/298 (68.79%), Postives = 232/298 (77.85%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTG-EAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAVAA-TRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M +V+SGSSGLIGTALV  LR +GH VVRLVRR+ GT  E  WDP AG LD   +D ADAV+NL+GAGIGD RW+  YK+E+L SR  TT LLA TIAA+  PP+VFLSGSAIG+YG  GD  + E S AG GFLAD+C  WE+A  PA AA  R   LRTGIVLS  GGALKKQLPLFKLGLGGRFG G QWQSW+SIDDE+ AI HLLTADV+GPVNLTAPNPVTN +F K LA  L RP+ +PIP+FGPKL+LGGELADALLF GQRVLP  LQ SGY F HPTL+ ALR +L +
Sbjct:    1 MRVVMSGSSGLIGTALVASLRSQGHTVVRLVRRSAGTSDEISWDPAAGTLDAASLDGADAVVNLSGAGIGDRRWSDAYKRELLDSRLHTTELLARTIAATERPPSVFLSGSAIGWYGPRGDEELTESSTAGSGFLADICEKWEEATGPAEAAGVRTAHLRTGIVLSPSGGALKKQLPLFKLGLGGRFGRGTQWQSWISIDDEVAAIEHLLTADVAGPVNLTAPNPVTNREFTKVLASVLKRPAFVPIPSFGPKLVLGGELADALLFTGQRVLPERLQASGYLFRHPTLEVALRALLGR 298          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A4P5SE75_9ACTN (Epimerase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5SE75_9ACTN)

HSP 1 Score: 390 bits (1003), Expect = 4.040e-134
Identity = 199/297 (67.00%), Postives = 241/297 (81.14%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTGEAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAV-AATRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M I++SG+SGLIG  LV+ LR+ GHEV +LVRRAP + E+QW+P  G++DV VID +DAVI+L+GAGIGD RWTA+YKQE+L SRT +T+LLA TIA  +  P+VFLSGSAIG YG  GD  +DERS  G  FLAD+C+ WED A P+V A  R V LRTGIVL+  GGALKKQLPLFK GLGG+FG+GKQWQSW+S+DDEI AI +LLTA++SG VNLTAPNPVT+AQF KALA  L RP++LPIP FGPKLLLG ELA+ALLF GQRV+P  LQ+SG+TF+H T+D ALR +L K
Sbjct:    1 MKIIISGASGLIGKPLVEILRKHGHEVTQLVRRAPLSNESQWNPATGQIDVSVIDGSDAVIHLSGAGIGDRRWTAKYKQELLDSRTKSTSLLALTIANCAKKPSVFLSGSAIGIYGPRGDEELDERSTHGSSFLADICKQWEDVAKPSVHAGVRTVFLRTGIVLTPLGGALKKQLPLFKFGLGGKFGNGKQWQSWISLDDEISAIEYLLTANISGAVNLTAPNPVTSAQFTKALARVLKRPAILPIPKFGPKLLLGAELAEALLFTGQRVMPVELQKSGFTFQHSTIDVALRALLNK 297          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A7X9Q370_9ACTN (TIGR01777 family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9Q370_9ACTN)

HSP 1 Score: 385 bits (988), Expect = 7.440e-132
Identity = 197/295 (66.78%), Postives = 228/295 (77.29%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTGEAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAVAA-TRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVL 882
            M +++SG+SGLIG+AL   LR   H+VV LVRR  G GE QWDP  G L    ++ ADAV++LAGAGIGDHRWTAEYK+E+L SR  +T LLA TIAA +  P VFLSGSAIG YG + D  +DE+S  G GFLAD CR WE AA PA AA TR+  LRTGIVL+ KGGALKK LPLFKL  GGRFG+GKQWQSW+S+ DE+GAI HLLT+DV GPVNLTAPNPVTNA F K L  A+ RPS+LP+P+FGPKLLLG ELA+ALLF GQ VLP VLQQSGY F+HP LD AL  +L
Sbjct:    1 MRVIISGASGLIGSALCSELRSGQHDVVTLVRRPAGAGEVQWDPANGVLPADALEGADAVVHLAGAGIGDHRWTAEYKREILDSRVRSTTLLAETIAACTQRPPVFLSGSAIGIYGASDDRELDEQSPVGSGFLADTCRQWEAAALPAAAAGTRVAYLRTGIVLTPKGGALKKMLPLFKLFAGGRFGNGKQWQSWISLPDEVGAICHLLTSDVEGPVNLTAPNPVTNAGFVKVLGKAMGRPSVLPVPSFGPKLLLGSELAEALLFTGQNVLPKVLQQSGYRFQHPRLDEALAALL 295          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A0R2QRN1_9ACTN (Epimerase n=9 Tax=root TaxID=1 RepID=A0A0R2QRN1_9ACTN)

HSP 1 Score: 382 bits (982), Expect = 6.290e-131
Identity = 197/297 (66.33%), Postives = 231/297 (77.78%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTGEAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAV-AATRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M IV+SG+SGLIGT LV++L++ GHEV+RLVRRA GTGE  WDPT+G L    ++  DAVI+L+GAGIGD RWT  YK+E+L SRT TT L+A TIA  +  P+VFLSGSAIG YG  GD  ++E S  G  FLADVC  WE AA PA  A  R VLLRTGIVL+ KGGALKKQLPLF+LGLGG+FG+GKQWQSW+SIDDE+GAI +LLTA++SG VNLTAPNPVTNA+F   LA  + RP+ LPIP F PK LLGGELADALLF GQRV+P  L  SGY F HPTL+ ALR +L K
Sbjct:    1 MKIVISGASGLIGTQLVEQLQQHGHEVIRLVRRAAGTGEIMWDPTSGVLSASALEGTDAVIHLSGAGIGDKRWTTSYKREILESRTITTNLIATTIARMNRKPSVFLSGSAIGIYGPRGDEELNEVSTNGTSFLADVCEQWELAAKPASDAGIRTVLLRTGIVLTTKGGALKKQLPLFQLGLGGKFGNGKQWQSWISIDDEVGAIEYLLTANMSGAVNLTAPNPVTNAEFTSTLARVVKRPAFLPIPPFAPKALLGGELADALLFTGQRVIPAALNASGYQFVHPTLEVALRALLKK 297          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A388NY01_9ACTN (Epimerase family protein Mb2239 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A388NY01_9ACTN)

HSP 1 Score: 380 bits (975), Expect = 7.290e-130
Identity = 194/297 (65.32%), Postives = 236/297 (79.46%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTGEAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAV-AATRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M I+V+G+SGLIG  LV  LR+ GHEVV+LVRR     E+QW+P  G+++  VID ADAVI+L+GAGIGD RWTA+YKQE+L SRT TTALLA+TIA S+  P+VFLSGSAIG YG  GD  + E+S +G  FLAD+C+ WE AA PAV A  R V LRTGIVL+  GGALKKQLPLFKLGLGG+FG G+ WQSW+S+DDE+ AI +LLTA++SG  NLTAPNPVTNA+F  ++A  L R ++LPIP FGPKLLLGGELADALLF GQRV+P  LQ+SG+TF+H T+D ALR +L K
Sbjct:    1 MKIIVTGASGLIGKPLVKNLRKHGHEVVQLVRRTAQANESQWNPATGQINASVIDGADAVIHLSGAGIGDRRWTAKYKQELLESRTKTTALLASTIANSAKKPSVFLSGSAIGIYGPRGDEELTEQSSSGSSFLADICKQWEAAAKPAVDAGVRTVYLRTGIVLTPLGGALKKQLPLFKLGLGGKFGDGRAWQSWISLDDELAAIEYLLTANISGAANLTAPNPVTNAEFTNSMARTLKRLAILPIPKFGPKLLLGGELADALLFTGQRVMPIELQKSGFTFQHQTIDIALRALLNK 297          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A6L6CSE9_9ACTN (TIGR01777 family protein n=2 Tax=root TaxID=1 RepID=A0A6L6CSE9_9ACTN)

HSP 1 Score: 377 bits (967), Expect = 1.200e-128
Identity = 190/297 (63.97%), Postives = 232/297 (78.11%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTGEAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAV-AATRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M IV+SG+SGLIGT LV  L+  GHEVV+LVRR+   G+  WDP +GKLD   ++  DAVI+L+GAGIGD RW+  Y++E+L SRT TT+LLANTIA+    P+VFLSGSAIG YG  GD  + E S+ G GFLADVC  WE AA PA+ A  R V LRTGIVLS KGGALKK LPLF+LG+GG+FG+GKQWQSW+S+DDE+ +IIHLLTA+VSG VNLTAP PVTNA+F K LA  + RP+++P+P F PK+LLGGELADALLF GQRV+P  L  SGY F+H TL+ ALR++L K
Sbjct:    1 MKIVISGASGLIGTQLVTTLKSSGHEVVQLVRRSAAAGQIMWDPKSGKLDPASLEGCDAVIHLSGAGIGDKRWSDAYRKEILDSRTATTSLLANTIASLQRKPSVFLSGSAIGIYGARGDEQLTETSEHGTGFLADVCEQWEAAAKPAIDAGVRTVFLRTGIVLSPKGGALKKLLPLFRLGVGGKFGNGKQWQSWISMDDEVASIIHLLTANVSGAVNLTAPQPVTNAEFTKVLARVVKRPAIVPVPTFAPKILLGGELADALLFTGQRVMPQALTASGYVFKHSTLESALRSLLTK 297          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A4P5R2M8_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5R2M8_9ACTN)

HSP 1 Score: 376 bits (966), Expect = 1.530e-128
Identity = 196/296 (66.22%), Postives = 227/296 (76.69%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTGEAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAVAATRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M IVVSG+SGLIG+ALV RL   GH+VVRLVRR   TGE+ WDP  G +D  VI+ ADAVI+L+GAGIGD RW+  YK+E+L SR  +T LLA+ IA ++  P+VFLSGSAIGFYG  GD  + E +  G GFLADVC+ WEDA   A    R VLLRTGIVLS KGGALKKQLPLF+ GLGG+FG G QWQSW+SIDDE+ AI HLLTA+V GPVNLTAP PVTNA FA  +   L RP+LLP+PAFGPKLLLGGELADALLF GQRV+P  L  SG+ F HPTL+ ALR +L K
Sbjct:    1 MRIVVSGASGLIGSALVPRLNAHGHDVVRLVRRNAKTGESTWDPARGVIDANVIEGADAVIHLSGAGIGDKRWSNSYKREILDSRVKSTKLLASVIAGAAKRPSVFLSGSAIGFYGARGDELLHETAAGGTGFLADVCKQWEDATVGAD--VRTVLLRTGIVLSPKGGALKKQLPLFRAGLGGKFGRGNQWQSWISIDDEVAAIEHLLTANVQGPVNLTAPAPVTNAHFAAVMGKVLRRPALLPVPAFGPKLLLGGELADALLFTGQRVIPAALSASGFEFAHPTLEIALRALLNK 294          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A6L6CFE5_9ACTN (TIGR01777 family protein n=4 Tax=root TaxID=1 RepID=A0A6L6CFE5_9ACTN)

HSP 1 Score: 374 bits (959), Expect = 2.040e-127
Identity = 197/298 (66.11%), Postives = 226/298 (75.84%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTG-EAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAVAA-TRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M I+V+G+SGLIG AL   L+ +GH VV  VRR P    E QWDP    +     D  DAV++LAGAGIGD RWT EYK E+L SRT  TALLANT+AA  T P VFLSGSAIG YG + D  ++E S  G+GFLADVC AWEDAAAPA AA  R V LRTGIVLS +GGALKKQLPLFKLGLGG+FG+G+QWQSW+SI DE+ AIIHLLT+ +SGPVNLTAP PVTNA+F K LA  L RP+L PIP FGPKLLLGGELADALLF GQRV+P+ L + G+ F H TLD ALR +L K
Sbjct:    1 MKILVTGASGLIGRALTTELKAQGHTVVAAVRREPRRNDEVQWDPKNSVMSPSAFDGVDAVVHLAGAGIGDKRWTKEYKMEILESRTLGTALLANTMAALETKPKVFLSGSAIGIYGASDDDILEETSADGEGFLADVCCAWEDAAAPASAAGIRTVFLRTGIVLSTQGGALKKQLPLFKLGLGGKFGNGRQWQSWISITDEVNAIIHLLTSQLSGPVNLTAPEPVTNAEFTKVLASTLSRPALFPIPPFGPKLLLGGELADALLFTGQRVIPSALTRDGFVFSHQTLDVALRALLKK 298          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A7K0Y516_9ACTN (TIGR01777 family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0Y516_9ACTN)

HSP 1 Score: 371 bits (953), Expect = 1.670e-126
Identity = 193/298 (64.77%), Postives = 225/298 (75.50%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAP-GTGEAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAV-AATRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M I+++G+SGLIG AL   L  +GH VV  VRR P    E QWDP A  LD    D  DAV++LAGAGIGD RWT +YK+E+L SRT +T LLA T+A+    P VFLSGSAIG YG  GD S+DE +  GDGFLADVC+ WE AAAPAV A  R V LRTGIVLS  GGALKKQLP+FKLG GG+FG+GK WQSW+SI DE+ AIIHLLT+ +SGPVNLTAP PVTNA FAK L  A+ RP++LPIP+FGPKLLLGGELADALLF GQRV+P+ L + G+ F H TLD ALR +L K
Sbjct:    1 MKILITGASGLIGRALSAELTSQGHTVVAAVRRTPKSAAEVQWDPKAAVLDASAFDGVDAVVHLAGAGIGDKRWTNDYKREILESRTLSTRLLATTMASLPNKPRVFLSGSAIGIYGVRGDESLDENATLGDGFLADVCKQWEAAAAPAVEAGIRTVYLRTGIVLSKNGGALKKQLPIFKLGAGGKFGNGKHWQSWISITDEVNAIIHLLTSQLSGPVNLTAPEPVTNAGFAKELGRAVSRPAVLPIPSFGPKLLLGGELADALLFTGQRVIPSALTRDGFVFTHQTLDAALRALLKK 298          
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Match: A0A6L6E0Q4_9ACTN (TIGR01777 family protein n=2 Tax=root TaxID=1 RepID=A0A6L6E0Q4_9ACTN)

HSP 1 Score: 370 bits (949), Expect = 6.760e-126
Identity = 194/298 (65.10%), Postives = 227/298 (76.17%), Query Frame = 1
Query:    1 MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTG-EAQWDPTAGKLDVGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASSTPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAVAA-TRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDEIGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGPKLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK 888
            M I+++G+SGLIG AL  +L+  GH  V  VRR P    E QW+P  G +     D  DAV++LAGAGIGD RWT  YK E+L SRT  T LLA+T+AA    P VFLSGSAIG YG+  D+ ++E+S  G GFLADVCR WE A+A A AA  R VLLRTGIVLS KGGALKKQLPLFKLGLGG+FG+GKQWQSW+SI DE+ AIIHLLT++VSGPVNLTAP PVTNA F + LA  L RP+L+PIP+FGPKLLLGGELA+ALLF GQRV P+VL   G+TF HPTLDGALR +L K
Sbjct:    1 MKILITGASGLIGQALTAQLKASGHTTVAAVRREPRRNDEVQWNPATGVMSPSAFDGVDAVVHLAGAGIGDKRWTDSYKMEILESRTLGTKLLADTMAALPVKPQVFLSGSAIGIYGERDDSELNEKSTIGTGFLADVCRDWEAASASASAAGIRTVLLRTGIVLSPKGGALKKQLPLFKLGLGGKFGNGKQWQSWISITDEVNAIIHLLTSNVSGPVNLTAPTPVTNADFTQTLASVLSRPALIPIPSFGPKLLLGGELANALLFTGQRVNPSVLLADGFTFSHPTLDGALRALLGK 298          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12007.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1B727_9ACTN1.460e-13468.79TIGR01777 family protein n=2 Tax=root TaxID=1 RepI... [more]
A0A4P5SE75_9ACTN4.040e-13467.00Epimerase n=1 Tax=Actinomycetia bacterium TaxID=18... [more]
A0A7X9Q370_9ACTN7.440e-13266.78TIGR01777 family protein n=1 Tax=Actinomycetia bac... [more]
A0A0R2QRN1_9ACTN6.290e-13166.33Epimerase n=9 Tax=root TaxID=1 RepID=A0A0R2QRN1_9A... [more]
A0A388NY01_9ACTN7.290e-13065.32Epimerase family protein Mb2239 n=1 Tax=Acidimicro... [more]
A0A6L6CSE9_9ACTN1.200e-12863.97TIGR01777 family protein n=2 Tax=root TaxID=1 RepI... [more]
A0A4P5R2M8_9ACTN1.530e-12866.22Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A6L6CFE5_9ACTN2.040e-12766.11TIGR01777 family protein n=4 Tax=root TaxID=1 RepI... [more]
A0A7K0Y516_9ACTN1.670e-12664.77TIGR01777 family protein n=1 Tax=Actinomycetia bac... [more]
A0A6L6E0Q4_9ACTN6.760e-12665.10TIGR01777 family protein n=2 Tax=root TaxID=1 RepI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12007contigP-wetherbeei_contig12007:356..1246 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_29690
PFAMsDUF1731,Epimerase
Model size891
Max annot lvl84992|Acidimicrobiia
KEGG koko:K07071
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.89e-124
EggNOG OGsCOG1090@1|root,COG1090@2|Bacteria,2GJS0@201174|Actinobacteria,4CN0B@84992|Acidimicrobiia
DescriptionDomain of unknown function (DUF1731)
Cds size891
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185934.8424208-CDS-P-wetherbeei_contig12007:355..12461683185934.8424208-CDS-P-wetherbeei_contig12007:355..1246Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12007 356..1246 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12007.1.1prot_P-wetherbeei_contig12007.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12007 356..1246 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12007.1.1

>prot_P-wetherbeei_contig12007.1.1 ID=prot_P-wetherbeei_contig12007.1.1|Name=mRNA_P-wetherbeei_contig12007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp
MHIVVSGSSGLIGTALVDRLRREGHEVVRLVRRAPGTGEAQWDPTAGKLD
VGVIDAADAVINLAGAGIGDHRWTAEYKQEVLRSRTTTTALLANTIAASS
TPPAVFLSGSAIGFYGDTGDTSVDERSKAGDGFLADVCRAWEDAAAPAVA
ATRLVLLRTGIVLSAKGGALKKQLPLFKLGLGGRFGSGKQWQSWVSIDDE
IGAIIHLLTADVSGPVNLTAPNPVTNAQFAKALAHALHRPSLLPIPAFGP
KLLLGGELADALLFDGQRVLPTVLQQSGYTFEHPTLDGALRTVLAK*
back to top

mRNA from alignment at P-wetherbeei_contig12007:356..1246+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12007.1.1 ID=mRNA_P-wetherbeei_contig12007.1.1|Name=mRNA_P-wetherbeei_contig12007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig12007:356..1246+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCACATCGTGGTCAGCGGTTCGTCCGGGCTCATCGGAACGGCACTCGT CGACCGTCTCCGCCGTGAGGGCCACGAGGTGGTGCGCCTCGTGCGCCGCG CACCGGGAACCGGCGAGGCGCAGTGGGACCCGACCGCGGGCAAGCTCGAC GTCGGTGTGATCGATGCCGCCGACGCGGTGATCAACCTCGCCGGAGCCGG CATCGGCGATCACCGTTGGACCGCGGAGTACAAGCAGGAGGTTCTCCGCA GCCGCACGACCACCACCGCACTCCTGGCGAACACGATCGCTGCATCGTCG ACGCCGCCGGCCGTGTTCCTGTCCGGATCGGCCATCGGCTTCTACGGCGA CACCGGCGACACGTCGGTCGACGAGCGGTCCAAGGCGGGCGACGGGTTCC TCGCCGACGTGTGCCGCGCGTGGGAGGACGCCGCCGCCCCGGCCGTAGCA GCCACGCGCCTCGTGCTGCTGCGCACCGGCATCGTCCTGTCGGCCAAGGG CGGCGCGCTCAAGAAGCAGCTGCCGTTGTTCAAGCTCGGACTCGGCGGAC GCTTCGGGTCGGGCAAGCAGTGGCAGAGCTGGGTGTCCATCGACGACGAG ATCGGAGCGATCATCCACCTGCTGACCGCAGACGTGAGCGGCCCGGTCAA CCTCACCGCCCCGAACCCGGTCACCAACGCCCAGTTCGCCAAGGCCCTGG CGCACGCGCTGCACCGCCCGTCGCTGCTGCCGATCCCTGCGTTCGGGCCG AAGCTGCTGCTCGGCGGCGAGCTCGCCGATGCGTTGCTGTTCGACGGCCA GCGAGTGCTGCCCACCGTGCTGCAGCAGAGCGGCTACACGTTCGAGCACC CCACGCTCGACGGCGCGCTGCGCACCGTGCTGGCAAAGTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig12007:356..1246+

>mRNA_P-wetherbeei_contig12007.1.1 ID=mRNA_P-wetherbeei_contig12007.1.1|Name=mRNA_P-wetherbeei_contig12007.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig12007:356..1246+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCACATCGTGGTCAGCGGTTCGTCCGGGCTCATCGGAACGGCACTCGT
CGACCGTCTCCGCCGTGAGGGCCACGAGGTGGTGCGCCTCGTGCGCCGCG
CACCGGGAACCGGCGAGGCGCAGTGGGACCCGACCGCGGGCAAGCTCGAC
GTCGGTGTGATCGATGCCGCCGACGCGGTGATCAACCTCGCCGGAGCCGG
CATCGGCGATCACCGTTGGACCGCGGAGTACAAGCAGGAGGTTCTCCGCA
GCCGCACGACCACCACCGCACTCCTGGCGAACACGATCGCTGCATCGTCG
ACGCCGCCGGCCGTGTTCCTGTCCGGATCGGCCATCGGCTTCTACGGCGA
CACCGGCGACACGTCGGTCGACGAGCGGTCCAAGGCGGGCGACGGGTTCC
TCGCCGACGTGTGCCGCGCGTGGGAGGACGCCGCCGCCCCGGCCGTAGCA
GCCACGCGCCTCGTGCTGCTGCGCACCGGCATCGTCCTGTCGGCCAAGGG
CGGCGCGCTCAAGAAGCAGCTGCCGTTGTTCAAGCTCGGACTCGGCGGAC
GCTTCGGGTCGGGCAAGCAGTGGCAGAGCTGGGTGTCCATCGACGACGAG
ATCGGAGCGATCATCCACCTGCTGACCGCAGACGTGAGCGGCCCGGTCAA
CCTCACCGCCCCGAACCCGGTCACCAACGCCCAGTTCGCCAAGGCCCTGG
CGCACGCGCTGCACCGCCCGTCGCTGCTGCCGATCCCTGCGTTCGGGCCG
AAGCTGCTGCTCGGCGGCGAGCTCGCCGATGCGTTGCTGTTCGACGGCCA
GCGAGTGCTGCCCACCGTGCTGCAGCAGAGCGGCTACACGTTCGAGCACC
CCACGCTCGACGGCGCGCTGCGCACCGTGCTGGCAAAGTGA
back to top