mRNA_P-wetherbeei_contig12.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A7S0DIN8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIN8_9EUKA) HSP 1 Score: 143 bits (360), Expect = 3.030e-33 Identity = 114/366 (31.15%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 244 VLGDALFDIEPGVTYN-------FGVLSRVKPADVASDVARTFAPTFSTYLNESLSDYGTSFTTT-GFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLS-LGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDV---GADFPLNTSTALWSEWAVFAMPWVPTD--VKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYY----PDGSNTC----NAYDFTALLANFQCPDGYARINFAYLATRCSDLGTP 1275
VL + LF + G Y G L+ P D + F+PTFSTYL E++ G F F + F++ + + DF +P +C +S + V I + RN G EL ++GG+ FT++DNDEI+ +ADL K V V +S LG+ +Q ++ +G + T Q+ F ++ V DVL N D G V+T +E +KG +N S +K+ ++ G FP +ST L+ EW++ +P V D V + VA ALM +++ H AA G Y+ W PP SY + + +N+ G C N YD CPDGY +++ ++++C+ G P
Sbjct: 18 VLYNILFGVSDGAPYTASKEVWKIGGLAIRGPTDFHA----RFSPTFSTYLTETV---GPQFNPPIRFESIALDFSSTFTQVEQ---ASVDFIYTNPSAFSCLESEFDVSAIVTLRNFRQGNELTRFGGIIFTRSDNDEINAIADLEGKIVEAVSISGLGAAQMQWKLLQDKG-YSLMTLPKQVRFAFNQKKIVLDVL-NGNADVGFVRTDMIEGMASKGEVNISSFKVIHQQNMTYEGRRFPFLSSTELYPEWSLGMLPHVGIDYMVSERVAFALM--DIHKDHWAAKNGTYSTWQPPLSYMRLNEMQEDLNWIIKNETTGKRMCIRSSNLYDAIV------CPDGYFKLSQDVVSSQCNSYGDP 363
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: F2UPL3_SALR5 (Guanylate cyclase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPL3_SALR5) HSP 1 Score: 114 bits (286), Expect = 1.290e-23 Identity = 83/269 (30.86%), Postives = 130/269 (48.33%), Query Frame = 1
Query: 490 DFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDV----GADFPLNTSTALWS-EWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNY-YPDGSNTCNAYDFTALLANFQCPDGYARINFAYLATRCSDLGTPC 1278
DF A+P TC ++ +G+ + + R V G +L ++G V FT+AD D+I+ D+ K V+ V G + G+ D Q+ F DE + VL N +D G V +G LE V ++ K+ +V G +P TS+++ S EW + +P VP +V+ AV AL+S ++S+ AIAG YAAW PP SY+ + S+ + D + L+ CP GY + + +A+ CS G C
Sbjct: 108 DFTFANPALFTCGEAEFGLASLLTLRRKVLGEQLSQFGAVIFTRADRDDINSAPDIAGKTVAAVSFITFGGFQAQWGTLRDAGLDFLIDTQQIKFTNDEDEVIAQVLEGN-SDVGFVTSGVLEDHVENSGLDLKKIKVLHAENVITTEGDVYPFITSSSVLSPEWTLAVLPNVPWEVQSAVVNALLS--IDSASEYAIAGRYAAWQPPKSYTATRALQVSLGVMFADDLGSFRCVRTKNLIDAVVCPFGYNKQSPELVASGCSLAGLDC 373
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: UPI001912E870 (PhnD/SsuA/transferrin family substrate-binding protein n=2 Tax=Chromatiaceae TaxID=1046 RepID=UPI001912E870) HSP 1 Score: 108 bits (269), Expect = 1.490e-21 Identity = 72/219 (32.88%), Postives = 107/219 (48.86%), Query Frame = 1
Query: 493 FWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
F L +PG + Y + IA+ RN ++GGV FT+A+ D+I++L+DL K++ V + G L + + G+ LA + F G V V + DAG V+T LE +G IN SD+++ A DF L ST L+ EW + P + + VA ALM ++ PAA+AGGYA W P Y V L+++ P
Sbjct: 139 FLLVNPGMYVDLEVRYRISRIATLRNGTGNQARNRFGGVIFTRAERDDITQLSDLRGKRLLAVDPNSFGGFLMQLDVLRQQGIAAPRALAALEFAGIHDAVVLGVR-DGQADAGMVRTDILERMATQGRINLSDFRVLAS-PAAPDFRLRLSTPLYPEWPFSTLQHTPNALAQQVAVALM--QMPQDDPAALAGGYAGWTVPLDYQPVHQLLQALGRPP 353
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A1Z4RLS0_9CHRO (Putative methyl-accepting chemotaxis protein n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RLS0_9CHRO) HSP 1 Score: 105 bits (262), Expect = 1.120e-20 Identity = 68/221 (30.77%), Postives = 112/221 (50.68%), Query Frame = 1
Query: 490 DFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKK-VSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
DF++ +PG F++ YGV+ IA+ +NL G ++G V TKAD +I+EL DL +KK +++ + G + + + G I +++ F G ++ VL + DAG V+T +E KG + D+K+ + +FP ST L+ EWA + +P ++K+AVA AL+ NS+ AA A W P +Y V + + P
Sbjct: 122 DFYITNPGMYIDFEANYGVNRIATFKNLRLGKAYTQFGAVIITKADRADINELEDLKQKKFMAVAPDAFGGWQMAEGVLFDAGFKKINKFFSELSFGGTHENVIKAVL-SGEVDAGTVRTDAIERLAQKGEVRIEDFKVINQQETTPEFPFVHSTPLYPEWAFASSKKMPLELKEAVAKALLDMPKNSA--AAKAAKSDGWTVPLNYQPVNELFIDLKLPP 339
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A846HQP4_9GAMM (Histidine kinase n=1 Tax=Halochromatium sp. TaxID=2049430 RepID=A0A846HQP4_9GAMM) HSP 1 Score: 102 bits (253), Expect = 1.580e-19 Identity = 72/220 (32.73%), Postives = 114/220 (51.82%), Query Frame = 1
Query: 493 FWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIV-MLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
F L +PG + + + IA+ RN G ++GG+ FT+AD D+I+ELADL K++ V SLG ++Q + ++ +G + + LA + F G V V + D G V+T LE +G I SD+++ A V +FPL ST L+ EW + P + + VA AL+ ++ + AA+AGGY W P Y V L++++ P
Sbjct: 137 FLLVNPGMYVDLEVRHRISRIATIRNGSGGQARNRFGGLIFTRADRDDIAELADLRGKRLLAVDPHSLGGFLMQLDVLQRQG-IAVPRSLAALDFAGIHDAVVLAVR-DGLADVGLVRTDILERMAIQGIIEHSDFRVLAPRSV-PNFPLLLSTPLYPEWPFSTLQSTPNALAQQVAIALL--QMPTDAAAALAGGYTGWTVPLDYQPVHQLLQALHRPP 351
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A7S0MM44_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MM44_9CRYP) HSP 1 Score: 98.6 bits (244), Expect = 2.280e-19 Identity = 90/294 (30.61%), Postives = 129/294 (43.88%), Query Frame = 1
Query: 316 PADVASDVARTFAPTFSTYLNESLS---DYGTSFTTTGFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKV---SIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGY--------------INASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSV 1137
P ++ F PTF YLN + D SFT F FA + + DF P ++CF S + + I + RN G+EL +YGGV F +ADN + + DL + + SI++ V DN + G LAQ + D V DVL + DAG V+T LE ++A+D G FP +STAL+ E+A+ A+P V V +AV AL +N+S PAA AG Y+ + PP SY ++ S+
Sbjct: 36 PVGTSASFFSGFRPTFEEYLNAEVGRQFDPPISFTLK-FADFVSVFAMIESA-------EADFVYVSPNLMSCFQSEFDIAPILTLRNFRQGIELNRYGGVIFARADNMNVKSVKDLKGRTILGTSILLAQFQWKVFADNGLSLMQDSGKVLFLAQGMSQND---VVFDVL-SGIADAGFVRTDLLEGXXXXXXXXXXXXXXXXXVANLSAAD---------GRPFPFESSTALYPEYALGALPRVDWAVVRAVQGALQ--RINASSPAARAGLYSTFQPPLSYFALRSLQESL 306
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A1E2UP35_9GAMM (Histidine kinase n=5 Tax=Candidatus Thiodiazotropha endoloripes TaxID=1818881 RepID=A0A1E2UP35_9GAMM) HSP 1 Score: 99.4 bits (246), Expect = 1.220e-18 Identity = 79/293 (26.96%), Postives = 124/293 (42.32%), Query Frame = 1
Query: 271 EPGVTYNFGVLSRVKPADVASDVARTFAPTFSTYLNESLSDYGTSFTTTGFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
E G TY GVL++ + + T + YL + ++D F + + I DF LA+ G + + IA+ N V G ++GGV FT+ DN I L+DLN V + G L R + + FN + V D +IN DAG V++ TLE A G + + K+ + FP S+ L+ EW + A+P P + + V+ AL++ + HPAA++ G W P +Y V + +S+N P
Sbjct: 20 EEGSTYAIGVLAKRGESITLQRWSET-----ADYLTQKITDARFRIVPLPFEEIEPAIQSKQI----------DFLLANSGIYIKAEHDFRAFRIATLINKVGGHAEERFGGVIFTRKDNQTIQALSDLNGITFGAVNPTSLGGFLMAKRELQRHNIDLDKQTTLHFFN--THDAVVDAVINGKVDAGTVRSDTLEKMSASGMVKLHEIKVLNLQ-TNQGFPYLLSSQLYPEWPIAALPHTPKTIGEKVSIALLN--MPKDHPAAVSSGTFGWTVPANYESVHELYKSLNIPP 292
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A7D4NRP6_9GAMM (PhnD/SsuA/transferrin family substrate-binding protein n=2 Tax=Thiomicrorhabdus TaxID=2039723 RepID=A0A7D4NRP6_9GAMM) HSP 1 Score: 97.1 bits (240), Expect = 7.540e-18 Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 1
Query: 490 DFWLADPGFLTCFDSIYGVDVIASRRNL-VDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
DF +A+P F + G+ +A+ R V G EL++YGGV FT+AD ++I L DL + ++ V + G R + I DL ++ F G V V D G V+TGTLE A+G I+ +D+ + A A FP ST L+ EW + + V + VA ALM +++S P+ + A W P +Y V D L+ + P
Sbjct: 79 DFIIANPAFYVELEKNDGITPVATMRTKGVSGSELKRYGGVIFTRADREDIQTLRDLKGRTLAAVDSASFGGWQIGWRELKHHAIDIDRDLERVEFIGTHDAVVYAVA-EGAADVGIVRTGTLEKMAAEGGISLNDFVVLAPRHP-AGFPYMLSTDLYPEWPIAKVSGVSEALAIKVAVALM--QISSQDPSFQSSNLAGWTLPLNYQSVHDALKELEVGP 295
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A370B3U4_9SPIO (Diguanylate cyclase n=1 Tax=Oceanispirochaeta sp. M1 TaxID=2283433 RepID=A0A370B3U4_9SPIO) HSP 1 Score: 95.1 bits (235), Expect = 1.800e-17 Identity = 68/220 (30.91%), Postives = 106/220 (48.18%), Query Frame = 1
Query: 490 DFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMMDVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQDQLRSVNYYP 1149
DF L + F+ YG++ +A+ +NL +L ++GGV FT++D +++ DLN + ++ V S G R + DL + F GD ++ VE V N DAG V+T TLE +G IN D+ + F L ST L+ EW +MP + + + VA AL+S + +S A A W P +Y V D +R ++ P
Sbjct: 78 DFVLTNSLLYISFEINYGINRLATLKNLRGEQDLTEFGGVLFTRSDRIDLNFSRDLNGRTLAAVDPSSIGGWYSVAREMKQENFDPYRDLKSLEFLGDHFSVVEAVK-NRKVDAGIVRTDTLEYMADQGLINLKDFSVINPYPRTMKFNLRRSTELYPEWPFASMPHISQRLSEQVAIALISMDADSE--TARRTMSAGWTIPLNYKAVHDCMRELHIPP 294
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Match: A0A5C0DR01_9CYAN (Tetrathionate sensor histidine kinase TtrS n=3 Tax=Nostocales TaxID=1161 RepID=A0A5C0DR01_9CYAN) HSP 1 Score: 94.7 bits (234), Expect = 3.740e-17 Identity = 81/302 (26.82%), Postives = 125/302 (41.39%), Query Frame = 1
Query: 370 YLNESLSDYGTSFTTTGFNHLYGGFAALNISLYPGFPSPPDFWLADPGFLTCFDSIYGVDVIASRRNLVDGVELRKYGGVWFTKADNDEISELADLNEKKVSIVMLSLGSGVLQDNRMESEGGVGIATDLAQMLFNGDEYTTVEDVLINNYTDAGAVQTGTLESFVAKGYINASDYKIFAMM-DVGADFPLNTSTALWSEWAVFAMPWVPTDVKKAVAAALMSPELNSSHPAAIAGGYAAWDPPYSYSGVQD--QLRSVNYYPDGSNTCNAYDFTALLANFQCPDGYARINFAYLATRCSDL 1266
YL LS+Y FT N G A ++ +F +A PG F+++YGV+ +A+ + L G +GGV F A D I L DL K V + G R E G+ D + F + + V + DAG + T LE +G ++ ++KI G FP ST L+ EW P+ + + VA AL+ +L HPAA A W P +Y V + Q+ V+ Y D T ++++ +N D N + + R ++
Sbjct: 24 YLTTELSEY--DFTIVPLNFTQIGAAIEQNAV--------EFVIASPGIYVEFEALYGVNRLATLKQLRMGRAYTMFGGVIFCNAHCDNIQSLTDLRGKNFVAVAENSFGGWRSAWREIVEAGINPYRDFQSLQFT-NSHDAVIYAIGEGKADAGTISTNVLEQMALEGKVDLKNFKIINQQTQYGEKFPFALSTQLYPEWPFAVTQETPSQLAEQVAIALL--KLPKDHPAAKAAKSEGWTIPLNYQSVHECFQVLQVHPYKDFGKTTSSFELAVKGSNDGLWDWNLETNEVFFSNRWKEM 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12.4.1 >prot_P-wetherbeei_contig12.4.1 ID=prot_P-wetherbeei_contig12.4.1|Name=mRNA_P-wetherbeei_contig12.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp MTRMRLPIAQFFALVRAVLGDALFDIEPGVTYNFGVLSRVKPADVASDVAback to top mRNA from alignment at P-wetherbeei_contig12:13650..16803+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12.4.1 ID=mRNA_P-wetherbeei_contig12.4.1|Name=mRNA_P-wetherbeei_contig12.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3154bp|location=Sequence derived from alignment at P-wetherbeei_contig12:13650..16803+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12:13650..16803+ >mRNA_P-wetherbeei_contig12.4.1 ID=mRNA_P-wetherbeei_contig12.4.1|Name=mRNA_P-wetherbeei_contig12.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig12:13650..16803+ (Phaeothamnion wetherbeei SAG_119_79)back to top |