mRNA_P-wetherbeei_contig1199.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A6A5BWG9_NAEFO (4HBT domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BWG9_NAEFO) HSP 1 Score: 82.4 bits (202), Expect = 5.490e-14 Identity = 49/130 (37.69%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 247 RFGLDVDFPVLDTPEIGALMGRRGQPYTRDTIDIRCWWHAGRREVIGSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTIRLHVRYRRFVPLAREV-RLAARVTAVNGGKVFCHATL 633 R + +FP L I +GR+G + +I +W +++G+V F +CEGPPG HGGA+ATALD+A G GFS T+ L V Y +F+PL R V L V G KVF L Sbjct: 50 RLSWEFNFPKLVDVNIQKSLGRKGGAFAVYSIQRLMFWDKQENKIVGAVAFGIDCEGPPGCVHGGAIATALDEAFGWCCIRNIGFS---GVTLNLSVNYFKFIPLKRAVVGLEIETERVEGKKVFMKGKL 176
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A1F2U771_9BACT (4HBT domain-containing protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29 TaxID=1797182 RepID=A0A1F2U771_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 8.430e-8 Identity = 49/147 (33.33%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 238 DWTRFGLDVDFPVLDTPEIGALMGRRGQPYTRDTIDIRCWWHAGRREVI-GSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTI-RLHVRYRRFVPLAREVRLAARVTAVNGGKVFCHATLTDPGPDLAAAPGV 672 DWTR V P I + D + + ++ G ++ V+F EGPPG AHGGAVA+ALD+A+G + G + RL V +R VPL + + A +T ++G KV C A LT LA A G+ Sbjct: 17 DWTR--------VDPFPRIHTKRSFVSDSFESDRLRV-VYFRVGDEPILRAKVWFGPGTEGPPGIAHGGAVASALDEAVG-----GVAWMLGHRVLVARLTVDFRAMVPLGIDATMEASITGIDGRKVSCRARLTADDTVLAEAEGL 149
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: B3E8M7_TRIL1 (Thioesterase superfamily protein n=1 Tax=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) TaxID=398767 RepID=B3E8M7_TRIL1) HSP 1 Score: 60.8 bits (146), Expect = 2.450e-7 Identity = 47/147 (31.97%), Postives = 69/147 (46.94%), Query Frame = 1 Query: 214 LREELAG-GDWTRFGLDVDFPVLDTPEIGALMG-----RRGQPYTRDTIDIRCWWHAGRREVIGSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTI-RLHVRYRRFVPLAREVRLAARVTAVNGGKVFCHATL 633 L +L+G DWT F D P L + + G R Y RD + + ++F EGPPG AHGGA+A +D+ALG A ++ G+ + L+V +R +PL R + L ++V +V G KV H L Sbjct: 15 LPVDLSGEADWTSF----DAPSLVGDSLRFVSGEPDGNRFRVRYYRDP----------EQHLHARIWFGPGTEGPPGHAHGGAIAAIMDEALG-----LAAWAEGYPIVVGNLNVSFRAMLPLQRVITLESKVVSVEGRKVMVHGRL 142
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: H0EAM6_9ACTN (4HBT domain-containing protein n=1 Tax=Patulibacter medicamentivorans TaxID=1097667 RepID=H0EAM6_9ACTN) HSP 1 Score: 60.5 bits (145), Expect = 3.190e-7 Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 364 AGRREVIGSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTIRLHVRYRRFVPLAREVRLAARVTAVNGGKVFCHATLTD 639 A ++ SV F EG PG AHGGAVAT LDDALG+ + R + T L++ YR+ L RE+++ A T ++G K+ H + D Sbjct: 31 AAEDRIVASVRFDRRQEGAPGIAHGGAVATVLDDALGSVLM----LLRRPAVTANLNIDYRQPAYLGRELQVEASCTGIDGRKIHLHGVVRD 118
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A3M8F0V6_DESBX (PaaI family thioesterase n=1 Tax=Desulfuromonadales bacterium TaxID=2099678 RepID=A0A3M8F0V6_DESBX) HSP 1 Score: 59.7 bits (143), Expect = 5.900e-7 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 259 DVDFPVLDTPEI--GALMGRRGQPYTRDTIDIRCWWHAGRREVIGSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTI--RLHVRYRRFVPLAREVRLAARVTAVNGGKVFCH 624 + D+ D P + +L G+P D +R ++ + + ++F EGPPG AHGGAVA +D+ALG + AAG+ P + L+V +R +PL + V + +RV + G KV H Sbjct: 22 EADWVAFDAPSLVGESLRFVSGEP-DGDRFRVR-YYRDSEKHLHARIWFGPETEGPPGHAHGGAVAAVMDEALGLAAW-AAGY-----PIVVGNLNVSFRTMLPLQKVVTVESRVVSAEGRKVMVH 139
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A6G0A6P6_9ACTN (PaaI family thioesterase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A6P6_9ACTN) HSP 1 Score: 61.2 bits (147), Expect = 6.250e-7 Identity = 40/93 (43.01%), Postives = 48/93 (51.61%), Query Frame = 1 Query: 361 HAGRREVIGSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTIRLHVRYRRFVPLAREVRLAARVTAVNGGKVFCHATLTD 639 H G+R V+G V F + EGPPG HGG VA A D+ LGA A S T RL YRR PL + L RV + G K+F T+ D Sbjct: 122 HEGQR-VVGEVTFGSAYEGPPGCVHGGYVAGAFDELLGA----AQSLSGVQGMTARLITNYRRPTPLHTPLMLEGRVDRIEGRKIFAVGTMRD 209
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A7S3B6R1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B6R1_9EUKA) HSP 1 Score: 59.3 bits (142), Expect = 1.230e-6 Identity = 35/93 (37.63%), Postives = 46/93 (49.46%), Query Frame = 1 Query: 358 WHAGRREVIGSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTIRLHVRYRRFVPLAREVRLAARVTAVNGGKVFCHATLT 636 W A + + G F ++CEGP G AHGGA+AT D A + AAG W T +L YR +P V+L ARV A+ + LT Sbjct: 64 WMADEQCLRGVARFGSDCEGPEGHAHGGAIATVADAATATAAYKAAG---RWGLTTKLECNYREMLPTNSPVQLEARVVALKPRRATVEWQLT 153
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A6I2SP81_9DELT (PaaI family thioesterase n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A6I2SP81_9DELT) HSP 1 Score: 57.8 bits (138), Expect = 2.730e-6 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1 Query: 391 VFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTI--RLHVRYRRFVPLAREVRLAARVTAVNGGKVFCH 624 ++F EGPPG AHGGAVA +D+ALG + AAG+ P + L+V +R +PL + V + +RV + G KV H Sbjct: 66 IWFGPETEGPPGSAHGGAVAAVMDEALGLAAW-AAGY-----PIVVGNLNVSFRNLLPLQKVVTVESRVVSAEGRKVMVH 139
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A7V8W8Y9_9ACTN (PaaI family thioesterase n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V8W8Y9_9ACTN) HSP 1 Score: 57.0 bits (136), Expect = 3.230e-6 Identity = 43/104 (41.35%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 361 HAGRREVIGSVFFATNCEGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTIRLHVRYRRFVPLAREVRLAARVTAVNGGKVFCHATLTDPGPDLAAAPGV 672 HA VIG+V EG PG AHGGAVAT LDDALG+ + R + T RL V YRR L R + A V + +G K++ L + G +A A G+ Sbjct: 6 HADGERVIGTVTLDRRHEGAPGFAHGGAVATVLDDALGSVLT----LLRLPAVTARLEVNYRRPAFLGRRFDVEAWVESRDGRKLYLAGELREGGEAVADALGL 105
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Match: A0A1S6RSQ8_STRHY (Thioesterase n=2 Tax=Streptomyces hygroscopicus TaxID=1912 RepID=A0A1S6RSQ8_STRHY) HSP 1 Score: 57.4 bits (137), Expect = 4.810e-6 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 412 EGPPGGAHGGAVATALDDALGATVFHAAGFSRGWSPTIRLHVRYRRFVPLAREVRLAARVTAVNGGKVFCHAT 630 +G PG AHGG +A ALD+ LGA + R + T RL + R VP+ E+ L ARVTAV+G KV+C AT Sbjct: 53 QGAPGLAHGGVLAAALDETLGALNW----LHRAITVTGRLETDFVRPVPVGTELHLEARVTAVHGRKVYCSAT 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1199.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1199.1.1 >prot_P-wetherbeei_contig1199.1.1 ID=prot_P-wetherbeei_contig1199.1.1|Name=mRNA_P-wetherbeei_contig1199.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=293bp MREPRRYYRRQPSDHVPFFLREELAGGDWTRFGLDVDFPVLDTPEIGALMback to top mRNA from alignment at P-wetherbeei_contig1199:2242..4091- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1199.1.1 ID=mRNA_P-wetherbeei_contig1199.1.1|Name=mRNA_P-wetherbeei_contig1199.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1850bp|location=Sequence derived from alignment at P-wetherbeei_contig1199:2242..4091- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1199:2242..4091- >mRNA_P-wetherbeei_contig1199.1.1 ID=mRNA_P-wetherbeei_contig1199.1.1|Name=mRNA_P-wetherbeei_contig1199.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig1199:2242..4091- (Phaeothamnion wetherbeei SAG_119_79)back to top |