mRNA_P-wetherbeei_contig11983.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: D7G3E6_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E6_ECTSI) HSP 1 Score: 139 bits (349), Expect = 4.140e-37 Identity = 65/114 (57.02%), Postives = 88/114 (77.19%), Query Frame = 3 Query: 177 FRQSPNTMRELSWVGPVGPGGAPPLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDYAHHDALQLNLDD 518 F Q+PN + EL ++ PV G LDRS I H+L+MGE+++AV+ DDFELG +R PLE AV +YDT+ + VVL+RARCG++AV+VVPLVP + +C++LG +Y DALQLNLDD Sbjct: 187 FVQTPNPVLELEYLRPVNSNGR-RLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDD 299
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: A0A835Z3P7_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3P7_9STRA) HSP 1 Score: 133 bits (334), Expect = 4.130e-35 Identity = 61/115 (53.04%), Postives = 84/115 (73.04%), Query Frame = 3 Query: 177 FRQSPNTMRELSWVGPVGPGGAPPLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDYAHHDALQLNLDDH 521 F QSPN++ EL+++GPV G L RS + HY++ GE++EAV+ DDFEL T+R PLE A+A D +R+ VVL RARCG++ V+ +PLVP+ +C+ L DY DALQLNLD+H Sbjct: 165 FVQSPNSLLELNYMGPVTSAGR-ALQRSLVLHYMSPGEFVEAVMQDDFELMTVRTPLEAAIAAADAQREVVVLMRARCGYICVVTMPLVPEIAVCRALAGDYEGRDALQLNLDEH 278
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: A0A7S2A9V4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9V4_TRICV) HSP 1 Score: 104 bits (260), Expect = 3.140e-24 Identity = 56/120 (46.67%), Postives = 74/120 (61.67%), Query Frame = 3 Query: 177 FRQSPNTMRELSWVGPVGPGGAP-PLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDYAH-----HDALQLNLDD 518 F QS T+ ELS P P G P +RS + H+LTMGEY V DDFE+ ++R L+ AV YD ++A VL R RCGH+AV + LVP++G+CK LG +Y ++QLNLDD Sbjct: 149 FVQSGCTLAELSLPNPKRPDGRPLGRERSVLMHFLTMGEYDLEVCRDDFEMASVRGELKDAVKAYDERKEAAVLVRFRCGHVAVGLATLVPEYGVCKALGREYYQGTVGAEGSVQLNLDD 268
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: A0A1E7FEW3_9STRA (MYND-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW3_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.970e-23 Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 3 Query: 177 FRQSPNTMRELSWVGPVGPGGAPPLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDYAHHD---ALQLNLDD 518 F Q+ T+++LS P G + RS + H+LT+GE+ V +DFEL +R PL+ A+ +Y+TE++ V+L R RCG++++ LVPD+GICK+LG+DY + A+QLNLDD Sbjct: 111 FLQTDKTLQDLSVYIPKDCTGH-TVTRSILLHFLTLGEFDSEVCKEDFELAMMRTPLKDAIDSYETEKEVVILCRFRCGNMSLGKAILVPDYGICKKLGQDYYAENPAGAVQLNLDD 226
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: A0A7S0UGY3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGY3_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.160e-23 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 177 FRQSPNTMRELSWVGPVGPGGAPPLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDYAHHD---ALQLNLDD 518 F Q+ T+ ++S P G + RS + H+LT+GE+ V DFEL +R PL++AV TYDTE++ V+L R RCG++++ LVPD+ ICK+LG+DY + ALQLNLDD Sbjct: 131 FLQTDRTLEDMSLYIPKDCTGH-TITRSVLLHFLTLGEFDSEVCRTDFELALMRTPLKEAVETYDTEQEVVLLCRYRCGNMSLGRAALVPDYRICKKLGQDYYSENSAGALQLNLDD 246
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: A0A7S2R2L0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2L0_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.060e-23 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 255 RSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDY------AHHDALQLNLDD 518 RS + HYLT+GE+ V DDFEL T+R L++AV ++D E+ VVL R RCGH+AV PLVPD+G+CK LG+ Y A A+QLNLDD Sbjct: 188 RSVLLHYLTLGEFDSEVCRDDFELATVRDRLKQAVDSHDIEKDMVVLMRFRCGHVAVGTAPLVPDYGLCKSLGQQYYGTGEGASSGAIQLNLDD 281
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: A0A7S0F684_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F684_9STRA) HSP 1 Score: 101 bits (252), Expect = 4.800e-23 Identity = 54/118 (45.76%), Postives = 72/118 (61.02%), Query Frame = 3 Query: 177 FRQSPNTMRELSWVGPVGPGGAPPLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDYAHHD----ALQLNLDD 518 F QS ++R+LS P G RS + H+LT+GEY V DDFE+ R L + V YD E++ V+L+R RCGH+AV LVPD+GICK+LG DY + A+QLNLD+ Sbjct: 152 FVQSNMSLRDLSIPIPKDVTGVAMPRRSILMHFLTLGEYDSEVCRDDFEMAEARTKLSQIVEEYDEEKEVVLLYRMRCGHVAVGRAVLVPDYGICKQLGRDYYDSNNSAGAVQLNLDE 269
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Match: K0TEP8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEP8_THAOC) HSP 1 Score: 73.6 bits (179), Expect = 6.660e-14 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 246 PLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLEKAVATYDTERQAVVLWRARCGHLAVLVVPLVPDFGICKRLGEDYAHHD----ALQLNLDD 518 P RS + H+LTM E+ + + +DFEL ++++ L++AV +D+ R H+ + +VPLVPDF +CK LGE Y + ALQLN+DD Sbjct: 15 PKQRSILLHWLTMEEFSKELAMEDFELASVKKELKEAVEDHDS--------RPSNTHVGLGIVPLVPDFNLCKCLGEQYFGNGEASGALQLNIDD 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11983.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11983.1.1 >prot_P-wetherbeei_contig11983.1.1 ID=prot_P-wetherbeei_contig11983.1.1|Name=mRNA_P-wetherbeei_contig11983.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp MRELSWVGPVGPGGAPPLDRSCIFHYLTMGEYLEAVVSDDFELGTLRRPLback to top mRNA from alignment at P-wetherbeei_contig11983:62..594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11983.1.1 ID=mRNA_P-wetherbeei_contig11983.1.1|Name=mRNA_P-wetherbeei_contig11983.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=533bp|location=Sequence derived from alignment at P-wetherbeei_contig11983:62..594+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11983:62..594+ >mRNA_P-wetherbeei_contig11983.1.1 ID=mRNA_P-wetherbeei_contig11983.1.1|Name=mRNA_P-wetherbeei_contig11983.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig11983:62..594+ (Phaeothamnion wetherbeei SAG_119_79)back to top |