mRNA_P-wetherbeei_contig1198.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: D7FJ10_ECTSI (VPS37 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ10_ECTSI) HSP 1 Score: 193 bits (490), Expect = 5.200e-55 Identity = 131/340 (38.53%), Postives = 182/340 (53.53%), Query Frame = 1 Query: 1 MSWLFGKKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEF-RSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLRELCDEHAGTAQAHARLTGGGDDGEILRKLKAAAKEAERASQ 1017 MSWLFG D+ RDRQI+N+++ V GL K D +L EVQ+ P D V LR+FLPT FP DRPVLQLLS V HPWVN YMQVVGHP WDG T P L+G+I+A + QEF RS G + AS G +A G + P YP +GGA+ G ++ ++ HH P+P +P F EL+ ++ +L RLL D+ AR+ALL GM +V M+++R D+R+GN + A TLAK + R E +++A+L+ L + A + GG D IL+++K A+K A+ +S+ Sbjct: 1 MSWLFGSGNRKTPTGQSDIRAARDRQISNLKERVPGLLLKSTDNSLNEVQITAP-DGAKVVLRVFLPTKFPSDRPVLQLLSPVTHPWVNTYMQVVGHPDLHGWDG----TNPP--LIGDIVAAVIQEFGRSNGGVTTSGRVQASTVWGGPIAQEPSGTPPAVGAFGLGNPPVS-YPAGRATGGAASAKGKAHMTSTDPRTGGEVQTRRMRPPVHHTPIPDIPDTFGELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKALQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSE 332
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A835YJX2_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX2_9STRA) HSP 1 Score: 159 bits (403), Expect = 8.030e-42 Identity = 132/381 (34.65%), Postives = 184/381 (48.29%), Query Frame = 1 Query: 1 MSWLFG------------KKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSP-EYLVGNIIAEIAQEFRSKSG-------ANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTY---------------GHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSG-------KLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLRELCDEHAGTAQAHARLTGGGDDGEILRKLKAAAKEAERASQ 1017 MSWLFG ++GGG T D+ R Q+A +++ + G+ + AD AL+EV + V PD V +RIF P FP +RPVLQLLS V HPWVN+YMQVVGHP A W GNA G P +V I+ E++ S +G + TN AS PS QQQ +P +P + G + + S G+ GG G K E +H P+P +P+RF EL+ +T QLRRL D VA +++GM S GMRE+ D+ +GNA+VA+A + + +L R E L+ +L E A G D L+ +K AAK+A+++SQ Sbjct: 1 MSWLFGTGGKTKSPRHGQQQGGGSTSDDADMKHHRLTQLAGLERDIPGIVKRAADGALYEVPVPVGPDGHPVNMRIFFPVKFPVERPVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNA---GKPISVIVKEIMIELSGGTASTAGQALPQQPSQRMPTNAASFAH-PSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHE-----AAALNPVGVGAGASADHVTLKAVKEAAKDADQSSQ 372
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S2HP11_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HP11_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.610e-26 Identity = 98/299 (32.78%), Postives = 146/299 (48.83%), Query Frame = 1 Query: 10 LFGKKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFRSKSGA--NAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLREL 900 +FG GG T RD QI Q KQADK+LF++ + + RS LRIFLP FPE++PVLQLL+ ++H W+NQY Q+VGHP +NWD T +I E+++E +S S + ++TN AS PS A+ + T+ QP+ R+ + + + PLPP+PA F +L+ M++ +L L DDVA +A L G SV M ++R + NA++A++ L + +L R EA LQ L+E+ Sbjct: 2 MFGFLAGGQT--------VRDTQIEKFQAGFPNAIQKQADKSLFDLPFQI--ERRSYTLRIFLPPKFPEEKPVLQLLTPLKHHWINQYNQIVGHPYLSNWDSKFELT--------TLIKEVSEELKSLSRQQPDVSSTNPASRHAPPSYRAAAMLDEPST---TMRQPS-----------------------------PSPKRNDEPEPFK--TPLPPIPAHFEDLDLMSVRELETLDRDDVAFQAHLFGFESVRTMCDMREQVIEENAKIAQSNLQRKDELELLRTEALTLQTTLQEI 248
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S4DDS2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDS2_HETAK) HSP 1 Score: 87.8 bits (216), Expect = 1.430e-17 Identity = 39/110 (35.45%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 55 LADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEF 384 L + R +QI +++ +V GL+ D++ FEV + P +R+V +RI+LP NFP ++PVLQ+L+Q++HPW+N + QV GHP +W P + ++ ++ +F Sbjct: 12 LQEQRSQQIESLKTIVPGLKETSTDQSQFEVPVSTP--SRTVMMRIYLPANFPNEKPVLQMLAQIRHPWLNTFFQVTGHPMLLSW--------GPHCNISTVVLDVMSQF 111
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S2RS55_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS55_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.250e-12 Identity = 87/302 (28.81%), Postives = 129/302 (42.72%), Query Frame = 1 Query: 1 MSWLFGKKGGGGTGVHRDLADCRDRQIANMQ-QMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFRSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXR-SGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAKAGQLAAQRAEAAQLQAQLREL 900 MSW+FG A RD QI+ + + + +Q F++++ LRIFLP FPE+ P+LQLLS +HPWVN Y QV GH + W+ T LV +AE+++ + A A Q P Y H Q+ XXX R S E PLP VP+ F +L+ + +L++L +D VA ALL + SV +R +R + + NA++A TL K +L A ++E + +L+EL Sbjct: 13 MSWIFGS------------ASARDTQISRFEREFPQAVRTQQQHSCHFDIEILTRHGNNR--LRIFLPAKFPEEAPILQLLSPFRHPWVNAYHQVTGHAYLSRWNEQYDLTT----LVKETLAELSRGTPAPQPAIXXXXXXXXXXXXXXXXAVRAPQP----------PPYEH--QVXXXXXXXXXXXXXXAAERRLSTPEQRRPSASPPRQEVSFPLPEVPSSFAQLQGLDRERLQKLDQDVVAFSALLHDLDSVKTLRSMREETIQENARIARETLDKREELEALQSEVLVSRLELQEL 284
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A0G4FKW6_VITBC (VPS37 C-terminal domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FKW6_VITBC) HSP 1 Score: 76.6 bits (187), Expect = 4.560e-12 Identity = 72/263 (27.38%), Postives = 116/263 (44.11%), Query Frame = 1 Query: 67 RDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVC-LRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEF-----RSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPARFNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATLAK 837 + RQIA+++QMV C Q D++ ++VQL V ++C L++ LP FP P + + +++HPW+N V GHP +W+ P +G +++EI +EF R +G AA S T P AAS+ + QP P YG G+ G S + PLPP PA F ++ M+L +L ++ L+ + + +D+ + NA+V E LA+ Sbjct: 5 KSRQIASLRQMVPSAVCLQPDESRWQVQL-VNQQFHTICTLQVLLPDQFPSVAPRISVTERLEHPWLNAD-HVTGHPALRSWN--------PHCHLGTVVSEIVKEFTRNPPRHTAGPATAAAAIPSRTTQPVGAASSDRSVGGVQQPPP--PLYGQSVSPPGTSGPS-----------------------TPSNRPRTPLPPCPAEFERVKQMSLAELEFYKDNPNCLDDLITESEQLQQYAAMTSDLIKANAEVLEKNLAR 232
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: A0A7S3HG72_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG72_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 6.050e-7 Identity = 70/269 (26.02%), Postives = 114/269 (42.38%), Query Frame = 1 Query: 67 RDRQIANMQQMVHGLECKQADKALFEVQLHVPPDARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPE-----YLVGNIIAEIAQEFRSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTY------GHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSG-KLDESEHHVP--LPPVPARFNELENMTLPQLRRLLEDDVARRALLEG--------MPSVAGMREVRADMRRGN 807 ++RQI ++ + + D LFE++ V S LR+F+P +FP RPVLQ + HPW++Q+ QV G + W +++ E L G E + R+ S A T + + L +T Q QPT T + Q + S S XX +G + E+ P +P+ F ELE M++ QL+RLL D+V+ +A ++ +P +A +R+ + R N Sbjct: 14 KERQIRELKAVFPSIRRPNNDDNLFEIKFVVNTQYSS--LRVFIPADFPNTRPVLQAAGPIVHPWLDQFKQVNGSEKLMTWTRHSSLVEVVEESLSALLTGTNSTEPPEAHRAVSPATTDLTAYPATSSTAQLRTATATYQPY--QPTPMAATVVPVXXXXSFAQATSSYAVSNTNXXXNRQTPVSQPIAAPAAGISMVEATRTTSGFFPALPSSFPELEKMSVLQLQRLLNDEVSLQAQVDSSGEYSQQVLPVIAQIRQTNEENARKN 278
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: F4NT08_BATDJ (VPS37 C-terminal domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NT08_BATDJ) HSP 1 Score: 60.1 bits (144), Expect = 1.720e-6 Identity = 69/270 (25.56%), Postives = 109/270 (40.37%), Query Frame = 1 Query: 55 LADCRDRQIANMQQMVHGLECKQ-ADKALFEVQLHVPPDAR--SVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFRSKSGANAAATNGASATGGPSLAASTQQQQSQYGQPTVAQPTYGHYPQLSGSGGASGVGGXXXXXXXXXXXXXXXRSGKLDESEHHVPLPPVPAR--------FNELENMTLPQLRRLLEDDVARRALLEGMPSVAGMREVRADMRRGNAQVAEATL 831 L++ R RQ+A++ H L+ +Q + FE+ L + + L + L FP+ P++ L HPW+N Q+VGH + ANW S +G I+ EI EF S++ GP+ P T P +GS + G S E+++P PA F L+ +L ++ RLLEDD + + V M+ V+ D+ +GNA++AE TL Sbjct: 14 LSELRRRQVASLSG--HNLQYRQIVPDSQFEITLGLGSAGQLPPFVLTLLLMPAFPDIAPIMYLRPSCTHPWINSQGQIVGHDKLANW--------SQHVSLGRIVKEIETEFTVH-------PPQPSSSSGPTHP------------PXXIPSTSTQSPAYTGSASSMPYG--------------TANSIMAQRLEYNLP----PANTISYSENIFPSLDAKSLEEINRLLEDDSSLEDFFLTISHVRDMKNVKHDLVKGNAEIAERTL 236
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Match: UPI001403401F (vacuolar protein sorting-associated protein 37A n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403401F) HSP 1 Score: 57.4 bits (137), Expect = 1.200e-5 Identity = 35/113 (30.97%), Postives = 57/113 (50.44%), Query Frame = 1 Query: 55 LADCRDRQIANMQQMVHGLECKQADKALFEVQLHVPP--DARSVCLRIFLPTNFPEDRPVLQLLSQVQHPWVNQYMQVVGHPRYANWDGNAACTGSPEYLVGNIIAEIAQEFR 387 L R QI ++Q + G Q D + +VP D +++ + +FLP FP+DRPV+ ++ V+HPW+N+ QV+G P N S +G + + +EFR Sbjct: 18 LQSHRQLQIQSLQAAIPGTVEMQKD-----IVYNVPAVIDNQTLTINVFLPPQFPQDRPVVHVMPYVRHPWLNEKCQVIGSPAI-----NGFVIQSD---LGKAVVSVVEEFR 117 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1198.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1198.4.1 >prot_P-wetherbeei_contig1198.4.1 ID=prot_P-wetherbeei_contig1198.4.1|Name=mRNA_P-wetherbeei_contig1198.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=339bp MSWLFGKKGGGGTGVHRDLADCRDRQIANMQQMVHGLECKQADKALFEVQback to top mRNA from alignment at P-wetherbeei_contig1198:4476..5953+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1198.4.1 ID=mRNA_P-wetherbeei_contig1198.4.1|Name=mRNA_P-wetherbeei_contig1198.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1478bp|location=Sequence derived from alignment at P-wetherbeei_contig1198:4476..5953+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1198:4476..5953+ >mRNA_P-wetherbeei_contig1198.4.1 ID=mRNA_P-wetherbeei_contig1198.4.1|Name=mRNA_P-wetherbeei_contig1198.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1017bp|location=Sequence derived from alignment at P-wetherbeei_contig1198:4476..5953+ (Phaeothamnion wetherbeei SAG_119_79)back to top |