mRNA_P-wetherbeei_contig11979.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11979.3.1
Unique NamemRNA_P-wetherbeei_contig11979.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A127EZU6_9HYPH (FeS assembly protein SufD n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EZU6_9HYPH)

HSP 1 Score: 366 bits (939), Expect = 1.670e-122
Identity = 193/286 (67.48%), Postives = 229/286 (80.07%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVV--DGDVATALNTALMSDGAMIRIAAGATVERPIHLVFAA-GDKPASVFTRSLVVVEKGARVMLVESHEGGTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT 849
            MN +V  MKT AE+ALA+ + +AK++LPG+G VA  RE AF++FDA GLP  R+EQW YTDLR L+REARPL G PDAAA ARAKDAG L+  +D +R+ F DG F PELSD+  L PGL+IRPM +ALAAGDPLIA +LGKVV  + +   ALNTALM DG +I +A GATVE PIHLVFAA G KP+SVFTRSLVV+E+GAR M+VESHE    HQINTA+ELVVGD+AHVDHIKIT G D +VHV+SLMA++GAHAR NDF F  GG +VRNQLF+RFDGEGT
Sbjct:    1 MNAEVLSMKTGAELALADAYAAAKARLPGDGKVAALREAAFKQFDAAGLPSWRVEQWHYTDLRGLLREARPLAGAPDAAAMARAKDAGRLVGDIDVQRIVFVDGAFAPELSDMDKLSPGLTIRPMGEALAAGDPLIAANLGKVVPAEREGVIALNTALMRDGVLIHVAKGATVEHPIHLVFAATGAKPSSVFTRSLVVIEQGARAMIVESHEATAAHQINTAIELVVGDNAHVDHIKITAGPDDLVHVASLMAAVGAHARLNDFTFNIGGGLVRNQLFVRFDGEGT 286          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A537U4H1_9PROT (Fe-S cluster assembly protein SufD n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537U4H1_9PROT)

HSP 1 Score: 351 bits (900), Expect = 1.340e-116
Identity = 189/287 (65.85%), Postives = 222/287 (77.35%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVD-GDVATALNTALMSDGAMIRIAAGATVERPIHLVFA-AGDKPASVFTRSLVVVEKGARVMLVESHEGGT--EHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT 849
            MN +VRP+KTAAE ALA  F +AK  LPG  A+   RE AFRRF+AEGLPHRR+E+WKYTDLRALMREA+PL GVPDAAAKARA+D  G +A +DARR+ F DG F PELSDLA LEPGL++  MAQALAAG+  + T L  VV   DVA ALNTA M DGA+I +A GA + +P+HLVF  AG  PA+VF RSLVV+E GAR ML+ESH G    E Q+N  LEL VGDDAHVDH+KITG G G +HVS+LMA++GAHARFN+F F TGG+VVRNQ F+ F GEGT
Sbjct:    1 MNAEVRPIKTAAETALATNFAAAKPALPGAAAIGTLREDAFRRFEAEGLPHRRVEEWKYTDLRALMREAKPLAGVPDAAAKARARDVLGQLAAIDARRIVFVDGAFAPELSDLARLEPGLTVGSMAQALAAGNRDLLTRLNHVVPTDDVAVALNTAFMGDGALIHVAQGAALAQPLHLVFVNAGGAPAAVFVRSLVVIESGARAMLLESHVGSNAREDQVNAVLELKVGDDAHVDHVKITGEGAGAMHVSTLMAAVGAHARFNEFLFTTGGSVVRNQAFVHFGGEGT 287          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A6L5FIN3_9HYPH (Fe-S cluster assembly protein SufD n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FIN3_9HYPH)

HSP 1 Score: 350 bits (897), Expect = 3.580e-116
Identity = 187/288 (64.93%), Postives = 230/288 (79.86%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVV--DGDVATALNTALMSDGAMIRIAAGATVERPIHLVF-AAGDKPASVFTRSLVVVEKGARVMLVESHE--GGTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT 849
            MN +VR MKTAAE++LA  +  AK+ LPG  A+   RE AFRRF+A+GLPHRR+E+WKYTDLRALMR+A+PL   PDAAA ARA+ AG ++  +  RR+ F DG+FV E SDLAGLE GL+I PMAQALAAGDPLI  HLGKVV  DG+ A ALNTA M DGA+I +A GA+++RP++LVF  AGDKPA++FTRSLVVV KGAR M+VE+HE  GG++ Q+N ALELVVGD+AHVDH+KI G G   +HVS+LMA +GAHARFNDF+F+ GGAV+RNQL+L F G  T
Sbjct:    1 MNAEVRQMKTAAELSLAAEWEQAKTSLPGPAAL---RERAFRRFEAQGLPHRRVEEWKYTDLRALMRDAKPLAAPPDAAALARARTAGSVLDDVACRRIVFVDGVFVAEFSDLAGLEKGLTIHPMAQALAAGDPLIDAHLGKVVPTDGNPAVALNTAFMGDGALIHLAPGASIDRPLNLVFFIAGDKPAAIFTRSLVVVGKGARAMVVETHEVAGGSDCQVNAALELVVGDEAHVDHVKIIGEGANALHVSTLMAKVGAHARFNDFSFIFGGAVIRNQLYLHFHGNET 285          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A537T7Q5_9PROT (Fe-S cluster assembly protein SufD n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T7Q5_9PROT)

HSP 1 Score: 346 bits (888), Expect = 9.040e-115
Identity = 190/288 (65.97%), Postives = 219/288 (76.04%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVD-GDVATALNTALMSDGAMIRIAAGATVERPIHLVFA-AGDKPASVFTRSLVVVEKGARVMLVESHEG---GTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT 849
            MN +VRP+KTAAE ALA  F + K  LPG   V   RE AFRRF+ EGLPHRR+E+WKYTDLRALMREA+PL GVPDAAAKARAK A   +A +DAR + F DG  VPELSDL GLE GL+IR MAQALAAGD  +  HLG++V   DVA ALNTA M DGA+I +A G  + +PIHLVF  AG + ASVF RSLVV+E GAR ML+ESH G    ++HQ+N  LEL VGD AHVDHIKITG G G +HVSSLMA+IGAHARFN+F F TGG VVRNQ+F+ F GEGT
Sbjct:    1 MNAEVRPIKTAAETALATSFAAVKRALPGPATVGVLREDAFRRFETEGLPHRRVEEWKYTDLRALMREAKPLAGVPDAAAKARAKAALATLAAVDARSIVFVDGALVPELSDLDGLEAGLTIRSMAQALAAGDGDLLAHLGRLVPTDDVAVALNTAFMGDGALIHVAPGVALAQPIHLVFVNAGSEAASVFARSLVVIEDGARAMLLESHVGCSDASDHQVNAVLELKVGDAAHVDHIKITGEGAGALHVSSLMAAIGAHARFNEFLFTTGGGVVRNQVFVCFGGEGT 288          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A6N7GQ51_9HYPH (Fe-S cluster assembly protein SufD n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GQ51_9HYPH)

HSP 1 Score: 343 bits (881), Expect = 9.120e-114
Identity = 182/287 (63.41%), Postives = 222/287 (77.35%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVDGD-VATALNTALMSDGAMIRIAAGATVERPIHLVFA-AGDKPASVFTRSLVVVEKGARVMLVESHEG--GTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT 849
            MN ++RP+KTAAE  L+  F SAK +LPG   +A  RE  F+RF+  GLPHRR+E+WKYTDLRALMR+A+PL   P A AK RAKDAG  +A ++ RR+   DG FVPELSD AGLE GL+IR MA+ALAAGD  +A  LG++V  D VA ALNTA M DG +I +AAGA + RP+HLVF  +G  PASVFTRSL V+ KGAR ML+ESHEG  G+++Q+NTALE+ VGD+AHVDHIKITG G G +HVSSLMA++GAHARFN+F F TG AVVRNQ+F+ F GEGT
Sbjct:    1 MNAEIRPIKTAAETTLSTAFASAKGRLPG---LAALRESEFKRFETAGLPHRRVEEWKYTDLRALMRDAKPLAAPPGADAKVRAKDAGAALAAVEGRRIVLVDGAFVPELSDFAGLEGGLTIRSMAEALAAGDAAVAERLGRIVPTDNVAVALNTAFMGDGVVIEVAAGAALTRPLHLVFFNSGGAPASVFTRSLAVIGKGARAMLIESHEGTPGSDYQVNTALEIEVGDEAHVDHIKITGEGAGSLHVSSLMAAVGAHARFNEFLFTTGAAVVRNQMFIHFKGEGT 284          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A1Q7BNU5_9PROT (Fe-S cluster assembly protein SufD n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BNU5_9PROT)

HSP 1 Score: 343 bits (881), Expect = 1.000e-113
Identity = 188/287 (65.51%), Postives = 219/287 (76.31%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVDG-DVATALNTALMSDGAMIRIAAGATVERPIHLVFA-AGDKPASVFTRSLVVVEKGARVMLVESHEGGT--EHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT 849
            MN +V P+KTAAE ALA  F + K  LPG  AV   RE AFRRF+AEGLPHRR+E+WKYTDLRALMREA+PL   PDAAAKARAKDA   +A +DARR+ F DG FVPELSDLA LEPGL++  MAQALA GD  +  HLG+VV   DVA ALNTA M DGA+I +A GA + +P+HLVF  AG + AS+F RSLVV+E GAR MLVESH G +  E Q+N  LEL VGD AHVDHIKIT  G G +H+S+L+A+IGAHARFN+F F TGG VVRNQ F+RF GEGT
Sbjct:    1 MNAEVLPIKTAAETALATSFAAVKDALPGAAAVGALREDAFRRFEAEGLPHRRVEEWKYTDLRALMREAKPLAVPPDAAAKARAKDALATLAAIDARRIVFVDGAFVPELSDLASLEPGLTVGSMAQALAGGDRGLLAHLGQVVPTQDVAVALNTAFMGDGALIHVAQGAALAQPLHLVFVNAGREAASIFVRSLVVIESGARAMLVESHVGSSASEDQVNAVLELKVGDAAHVDHIKITDEGAGALHLSTLIAAIGAHARFNEFMFTTGGGVVRNQAFVRFGGEGT 287          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A537Q543_9PROT (Fe-S cluster assembly protein SufD n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537Q543_9PROT)

HSP 1 Score: 334 bits (856), Expect = 6.230e-110
Identity = 182/286 (63.64%), Postives = 216/286 (75.52%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVD-GDVATALNTALMSDGAMIRIAAGATVERPIHLVFAAGDKPASV-FTRSLVVVEKGARVMLVESHEG--GTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEG 846
            M  +++PMKTAAE ALAE F + ++KLPG+  +A  R  AF  FDA GLPHRR+E+WKYTDLRAL+REA+PL   PDA AK RAK AG L+AG+ ARR+ F DG FV ELSDL  LEPGLSI PMA+ALA  DPL+A+ LG +V   DVA ALNTA M DGA++RI   A +ERP+HLVFA G   AS  FTRSLVV E+GA+  L+ESHEG  G ++Q+NTALEL VGD AHVDH+KI   G   +HVS+LMASIGAHAR  D  F TGGA+VRNQLF+RF GEG
Sbjct:    1 MRPEIKPMKTAAETALAEAFAAVRAKLPGDRRIAERRAAAFEAFDALGLPHRRVEEWKYTDLRALIREAKPLAAAPDAQAKRRAKGAGALLAGIGARRITFVDGAFVAELSDLVALEPGLSIAPMAKALAESDPLVASRLGAIVPTDDVAVALNTAFMGDGALVRIDRDARLERPLHLVFAFGSDTASATFTRSLVVAEEGAQATLIESHEGPDGIDYQVNTALELFVGDRAHVDHVKIGIEGARAIHVSTLMASIGAHARLRDLVFTTGGALVRNQLFVRFAGEG 286          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: UPI0010BF5B7C (Fe-S cluster assembly protein SufD n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BF5B7C)

HSP 1 Score: 321 bits (822), Expect = 8.290e-105
Identity = 165/287 (57.49%), Postives = 221/287 (77.00%), Query Frame = 1
Query:    1 MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVD-GDVATALNTALMSDGAMIRIAAGATVERPIHLVF-AAGDKPASVFTRSLVVVEKGARVMLVESHEGGTE--HQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT 849
            MN + RP+KT  E ALAE +++AK+ LPG+G VA  R  AF RF A GLPHRR+E+WKYTDLR  M +A+PL   PDA A+ RA++AG ++AG++ RRL   DG FV +LSDLAG+E GLSI+PMA+ALA+GD L++T+LGK++   D A +LNTALM DG +IR+AAG  +ERP+HLVF +  DKP ++FTRSL+V+E GAR  L+E+HEG  +  +Q+N ALELVVGDDA +D +KITG G   +HV++++A++GA A+ NDF+F  GGAVVRNQLF+R  G+ T
Sbjct:    1 MNAEPRPLKTTTERALAEAYIAAKAVLPGDGNVAAQRAAAFDRFAASGLPHRRVERWKYTDLRNFMPDAKPLAAPPDATARTRAREAGQVLAGVECRRLFVVDGSFVADLSDLAGMEMGLSIQPMAEALASGDALVSTYLGKIIAVDDPALSLNTALMGDGVVIRVAAGMAIERPLHLVFISTSDKPTAMFTRSLIVIEDGARATLLETHEGPDQSPYQVNDALELVVGDDAQLDRVKITGEGTDAIHVATVLATVGARAKINDFSFTVGGAVVRNQLFVRLAGQDT 287          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A1Q4DP72_9HYPH (Fe-S cluster assembly protein SufD n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DP72_9HYPH)

HSP 1 Score: 314 bits (804), Expect = 4.070e-102
Identity = 169/279 (60.57%), Postives = 213/279 (76.34%), Query Frame = 1
Query:   13 VRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVD-GDVATALNTALMSDGAMIRIAAGATVERPIHLVFA-AGDKPASVFTRSLVVVEKGARVMLVESHEGGTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGE 843
            +R +KTAAE ALA+ + +AK+ LPG   +  +RE AFRRF+A+GLPHRR+E WKYTDLRALMR+A+PL   P A AKARAK  G + A ++ARRL F DG FVPELSDL+  E GLSI PMAQALA+GD L+A H+G+V+D  D A ALNTALM DG +I++AAGATV RP+ +VFA +G++P SVFTRSLVVVE  A++ LVE+HEG  + QIN  +EL+VGDDA VDH+KI     G + V++L+ SIGA A+FNDF   TGG+V RNQ+F R  GE
Sbjct:    8 IRAVKTAAEAALADTYAAAKALLPG---LPAAREQAFRRFEAQGLPHRRVEAWKYTDLRALMRDAKPLAAPPGAEAKARAKQGGAIFASVEARRLVFVDGAFVPELSDLSA-EAGLSIMPMAQALASGDALVARHVGQVLDIDDPAVALNTALMGDGIVIKVAAGATVARPVMIVFAHSGERPVSVFTRSLVVVEPKAKLTLVETHEGAADDQINAVMELIVGDDAEVDHLKIAANRKGALQVATLIVSIGARAKFNDFAGATGGSVTRNQIFARLAGE 282          
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Match: A0A345ZTZ7_9HYPH (Fe-S cluster assembly protein SufD n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZTZ7_9HYPH)

HSP 1 Score: 302 bits (774), Expect = 1.180e-97
Identity = 165/280 (58.93%), Postives = 207/280 (73.93%), Query Frame = 1
Query:   10 DVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLPHRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLAFADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVD-GDVATALNTALMSDGAMIRIAAGATVERPIHLVFAAG-DKPASVFTRSLVVVEKGARVMLVESHEGGTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMASIGAHARFNDFNFVTGGAVVRNQLFLRFDGE 843
            DV P+KT AE AL+  F +A++KLPG GA+A  RE A R F+A GLPHRR+E+WKYTDLRAL+REA PL   PDAAAKAR K+AG ++AG++ R+L F DG FVPELSDL   EPGL++  +A ALA GD L+  HLGK     DVA ALNTA M DGA+IRIAAGA ++RPIHLVFAAG D P++ F RSL+VVEKGA+V+++E H+     Q+N ALEL+VGD+A VD++K+T      VHV+SL+A +GA A F  F F    +VVRNQ F+ F GE
Sbjct:    3 DVTPIKTPAEQALSAAFAAARAKLPGEGALAALREDAIRAFEARGLPHRRVEEWKYTDLRALLREANPLAPAPDAAAKARGKEAGEVLAGVETRKLVFVDGAFVPELSDLTA-EPGLTVGSLADALAKGDALLTQHLGKTYPTDDVAVALNTAFMGDGAVIRIAAGAEIKRPIHLVFAAGSDTPSAAFVRSLIVVEKGAKVVIIEDHDSANT-QVNAALELIVGDEAQVDYLKLTQAR--AVHVASLLAKVGARALFRGFAFTADSSVVRNQSFVHFAGE 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11979.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EZU6_9HYPH1.670e-12267.48FeS assembly protein SufD n=1 Tax=Rhodoplanes sp. ... [more]
A0A537U4H1_9PROT1.340e-11665.85Fe-S cluster assembly protein SufD n=5 Tax=Alphapr... [more]
A0A6L5FIN3_9HYPH3.580e-11664.93Fe-S cluster assembly protein SufD n=1 Tax=Hyphomi... [more]
A0A537T7Q5_9PROT9.040e-11565.97Fe-S cluster assembly protein SufD n=1 Tax=Alphapr... [more]
A0A6N7GQ51_9HYPH9.120e-11463.41Fe-S cluster assembly protein SufD n=1 Tax=Hyphomi... [more]
A0A1Q7BNU5_9PROT1.000e-11365.51Fe-S cluster assembly protein SufD n=1 Tax=Alphapr... [more]
A0A537Q543_9PROT6.230e-11063.64Fe-S cluster assembly protein SufD n=1 Tax=Alphapr... [more]
UPI0010BF5B7C8.290e-10557.49Fe-S cluster assembly protein SufD n=1 Tax=Pseudol... [more]
A0A1Q4DP72_9HYPH4.070e-10260.57Fe-S cluster assembly protein SufD n=1 Tax=Rhizobi... [more]
A0A345ZTZ7_9HYPH1.180e-9758.93Fe-S cluster assembly protein SufD n=1 Tax=Pseudol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11979contigP-wetherbeei_contig11979:1212..2060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog78245.Xaut_0086
Preferred namesufD
PFAMsUPF0051
Model size849
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K09015
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.51e-90
EggNOG OGsCOG0719@1|root,COG0719@2|Bacteria,1MVK0@1224|Proteobacteria,2TTK9@28211|Alphaproteobacteria,3F0J1@335928|Xanthobacteraceae
DescriptionUncharacterized protein family (UPF0051)
Cds size849
COG categoryO
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185933.4886494-CDS-P-wetherbeei_contig11979:1211..20601683185933.4886494-CDS-P-wetherbeei_contig11979:1211..2060Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11979 1212..2060 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11979.3.1prot_P-wetherbeei_contig11979.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11979 1212..2060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11979.3.1

>prot_P-wetherbeei_contig11979.3.1 ID=prot_P-wetherbeei_contig11979.3.1|Name=mRNA_P-wetherbeei_contig11979.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
MNIDVRPMKTAAEVALAEMFVSAKSKLPGNGAVACSREMAFRRFDAEGLP
HRRIEQWKYTDLRALMREARPLPGVPDAAAKARAKDAGGLMAGMDARRLA
FADGMFVPELSDLAGLEPGLSIRPMAQALAAGDPLIATHLGKVVDGDVAT
ALNTALMSDGAMIRIAAGATVERPIHLVFAAGDKPASVFTRSLVVVEKGA
RVMLVESHEGGTEHQINTALELVVGDDAHVDHIKITGGGDGVVHVSSLMA
SIGAHARFNDFNFVTGGAVVRNQLFLRFDGEGT
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mRNA from alignment at P-wetherbeei_contig11979:1212..2060+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11979.3.1 ID=mRNA_P-wetherbeei_contig11979.3.1|Name=mRNA_P-wetherbeei_contig11979.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig11979:1212..2060+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACATCGACGTCCGCCCGATGAAGACAGCGGCTGAGGTGGCGCTCGC GGAAATGTTCGTGTCCGCGAAGTCGAAGCTGCCTGGCAACGGCGCGGTCG CGTGCTCGCGCGAGATGGCCTTCCGCCGCTTCGACGCGGAGGGCCTGCCG CATCGGCGGATCGAGCAGTGGAAGTACACCGACTTGCGGGCGCTGATGCG CGAGGCCAGGCCGTTGCCGGGGGTGCCCGACGCTGCCGCCAAGGCCCGTG CCAAGGATGCCGGCGGGCTGATGGCCGGCATGGACGCGCGGCGGCTGGCG TTTGCCGATGGAATGTTCGTGCCGGAGTTGTCCGATCTGGCCGGCCTTGA GCCGGGACTCTCTATTCGCCCGATGGCGCAAGCGCTCGCCGCTGGCGATC CGCTGATCGCGACGCACCTCGGCAAGGTCGTGGACGGCGACGTCGCGACC GCGCTCAACACCGCGCTGATGAGCGACGGCGCGATGATCCGCATCGCCGC CGGCGCAACGGTCGAGCGGCCGATCCATCTGGTATTCGCCGCCGGCGACA AACCGGCCTCGGTGTTCACCCGTTCGCTCGTGGTGGTCGAGAAGGGCGCC CGCGTCATGCTGGTCGAAAGCCATGAGGGTGGCACGGAGCATCAGATCAA CACCGCGCTGGAACTGGTGGTCGGCGACGACGCCCATGTCGATCACATCA AGATCACCGGCGGCGGCGACGGCGTGGTGCACGTCTCCTCGCTGATGGCT TCGATCGGCGCGCATGCGCGATTCAACGATTTCAATTTCGTCACCGGCGG CGCGGTGGTGCGCAATCAGTTGTTCCTGCGCTTCGACGGTGAAGGCACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11979:1212..2060+

>mRNA_P-wetherbeei_contig11979.3.1 ID=mRNA_P-wetherbeei_contig11979.3.1|Name=mRNA_P-wetherbeei_contig11979.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig11979:1212..2060+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACATCGACGTCCGCCCGATGAAGACAGCGGCTGAGGTGGCGCTCGC
GGAAATGTTCGTGTCCGCGAAGTCGAAGCTGCCTGGCAACGGCGCGGTCG
CGTGCTCGCGCGAGATGGCCTTCCGCCGCTTCGACGCGGAGGGCCTGCCG
CATCGGCGGATCGAGCAGTGGAAGTACACCGACTTGCGGGCGCTGATGCG
CGAGGCCAGGCCGTTGCCGGGGGTGCCCGACGCTGCCGCCAAGGCCCGTG
CCAAGGATGCCGGCGGGCTGATGGCCGGCATGGACGCGCGGCGGCTGGCG
TTTGCCGATGGAATGTTCGTGCCGGAGTTGTCCGATCTGGCCGGCCTTGA
GCCGGGACTCTCTATTCGCCCGATGGCGCAAGCGCTCGCCGCTGGCGATC
CGCTGATCGCGACGCACCTCGGCAAGGTCGTGGACGGCGACGTCGCGACC
GCGCTCAACACCGCGCTGATGAGCGACGGCGCGATGATCCGCATCGCCGC
CGGCGCAACGGTCGAGCGGCCGATCCATCTGGTATTCGCCGCCGGCGACA
AACCGGCCTCGGTGTTCACCCGTTCGCTCGTGGTGGTCGAGAAGGGCGCC
CGCGTCATGCTGGTCGAAAGCCATGAGGGTGGCACGGAGCATCAGATCAA
CACCGCGCTGGAACTGGTGGTCGGCGACGACGCCCATGTCGATCACATCA
AGATCACCGGCGGCGGCGACGGCGTGGTGCACGTCTCCTCGCTGATGGCT
TCGATCGGCGCGCATGCGCGATTCAACGATTTCAATTTCGTCACCGGCGG
CGCGGTGGTGCGCAATCAGTTGTTCCTGCGCTTCGACGGTGAAGGCACG
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