mRNA_P-wetherbeei_contig11969.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: A0A6H5K2Z4_9PHAE (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z4_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.090e-26 Identity = 120/382 (31.41%), Postives = 181/382 (47.38%), Query Frame = 1 Query: 4 MLQAYADEGRALALKQSEMEKMVRRARAEQRQTVDDLAAARRDKAALTERLEKAAETAKAKDAELAXXXXXXXXXXXXXXXXXGKVSTVEM---ERDRAREEATAKMAALEAAWAERKELRQAVADLTAARDAALQQVRDGRTNAFVDEAGRRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSERAAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASLKEXXXXXXXXXXXXXXXXXXXXERLGALEGEVEGLREEKGRGLRAQRAAESRMRVRVTEAEERAADLQAQLEAERQEAQQKLTAVRAQVSKHRCLG 1140 ML+AY DEG LA KQSEMEK VR+AR R ++ + ++ AL XXX +++T E E ++ RE +AK AAL+ +WAE K +L A +DA + + DG E+ +QWQ RE+ L Q QLQ++L R EA RED W++A+ R E+L+AEAHESTAPLLRQV++LQEE+R+RQE + E L++RAA+A+ SL +R +E E+ L+E ++ E+++R+++ EAE+RAA+ +LE ER+E++ ++++ Q+ R G Sbjct: 796 MLKAYMDEGAMLAFKQSEMEKTVRKARGALRGVQEERDSLAKENTALQAXXXXXXXXXXXXXXXXXXXXQSLAAMGAVSQASSHRLNTAEKATTELEKLREALSAKKAALDKSWAETKXXXXXXXELRAEKDALTKSLEDGGKAQKATESQLQQWQDRESTLLREQSQLQETLERVRREADRREDDXXXXXXXXXXXWKEAVGRAEALQAEAHESTAPLLRQVRSLQEEMRLRQEAVRAAEASLTDRAASAELACREAERRRRVAEAAVAASDERAHKAEGEVESLGFKLTRLETSNEELKAKCDQHAQRASEVEVELSTLKESSRASALKHKSTEAKLRLQLGEAEDRAAEALRRLEGERRESKDITSSLKEQLDALRRGG 1177
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: W7TG76_9STRA (Tata element modulatory factor 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG76_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.340e-26 Identity = 89/249 (35.74%), Postives = 149/249 (59.84%), Query Frame = 1 Query: 7 LQAYADEGRALALKQSEMEKMVRRARAEQRQTVDDLAAARRDKAALTERLEKAAETAKAKDAELAXXXXXXXXXXXXXXXXXGKVSTVEMERDRAREEATAKMAALEAAWAERKELRQAVADLTAARDAALQQVRDGRTNAFVDEAG-RRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSERAAAAD 750 + A +EG+ALA KQSEME++VR++RAE ++ + + + A + E +A + E K S +E E A+ E +++ +L+ AW E KE+++ ++++TA+ ++ ++ ++D AG + +++REA+L AT +QLQ++L+RA EAGLRED+L+ E+ +MRRRW+DA++R E + ++ HE+T PLLRQ+KALQEE R R E L++RA A+ Sbjct: 308 IHALQEEGKALAFKQSEMEQLVRKSRAELKKVESERSQLQESNEAHKREMVTLREQLRASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSHAQVEISSQHESLQKAWEEEKEMKRMISEMTAS-ESGVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEEARGRAAAWASAEEALTDRARGAE 555
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: A0A4D9CLU0_9STRA (TMF_TATA_bd domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLU0_9STRA) HSP 1 Score: 119 bits (299), Expect = 8.940e-26 Identity = 94/256 (36.72%), Postives = 153/256 (59.77%), Query Frame = 1 Query: 7 LQAYADEGRALALKQSEMEKMVRRARAEQR-------QTVDDLAAARRDKAALTERLEKAAETAKAKDAELAXXXXXXXXXXXXXXXXXGKVSTVEMERDRAREEATAKMAALEAAWAERKELRQAVADLTAARDAALQQVRDGRTNAFVDEAG-RRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSERAAAAD 750 + A +EG+ALA KQSEME++VR++RAE + Q + A RR+ + E+L +A + E K S +E E RA+ E +++ +L+ AW E KE+++ ++++TA+ ++ ++ ++D AG + +++REA+L AT +QLQ++L+RA EAGLRED+L+ E+ +MRRRW+DA++R E + ++ HE+T PLLRQ+KALQEE R R E L++RA A+ Sbjct: 163 IHALQEEGKALAFKQSEMEQLVRKSRAELKKVEWERSQLQESNEAHRREMVTIREQL-------RASETEKNLLAQSLSAVQAVNKSAAEKTSKLEQELSRAQGEISSQHESLQKAWEEEKEMKRIISEMTAS-ESWVKDLQDPGKALSRGLAGIKDDFERREAVLQATNKQLQEALTRASLEAGLREDSLRQELAEMRRRWQDAVSRTEGMASDVHEATVPLLRQIKALQEETRGRAAAWASAEEALTDRARGAE 410
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: A0A7S2SPH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPH7_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.700e-25 Identity = 128/373 (34.32%), Postives = 200/373 (53.62%), Query Frame = 1 Query: 22 DEGRALALKQSEMEKMVRRARAEQRQTVDDLAAARRDKAALTERLEKAAETAKAKDAELAXXXXXXXXXXXXXXXXXGKVSTVEMERDRAREEATAKMAALEAAWAERKELRQAVADLTAARDAALQQVRDGRTNAFVDEAGRRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSERAAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASLKEXXXXXXXXXXXXXXXXXXXXERLGALEGEVEGLREEKGRGLRAQRAAESRMRVRVTEAEERAADLQAQLEAERQEAQQKLTAVRAQVSKHRCLG 1140 +EG+ LA K+ +++K++R A+ + D ++++ L E ++ T + + + K+S VE E ARE AL++AWA KE ++ V +L A + Q++ + D+ RR+ +QREALL A+Q+QLQD+L+R HEA LRE++L+ E+ MR+RW+D+ R E + A HEST PLL Q++ALQ+E R++ + +E ER A A+ XXXXXXXXXXXXXXXXXXXXXX K +RL L ++ L+E + +G R + E+++R +++EA E A DL+A++ AER KL ++ ++ R G Sbjct: 144 EEGQKLAKKEGDLQKLIRDKNAKLEELEKDRNRVKKERDGLAELTKQLEGTVRQHRDQTSATSQSLAAMQAVSNASSNKLSAVENELRTAREAEKDLRTALDSAWAAEKEQKKLVHELRAENEDLQQRMGHKQEKETQDQESRRELEQREALLQASQRQLQDTLARQQHEASLREESLREELAGMRQRWKDSTQRAEEIAAGVHESTKPLLHQIRALQDESRVKAQAWAASEATFMERTATAEXXXXXXXXXXXXXXXXXXXXXXXRAALEADLDDTKSHLAVASAEAKASAARQRAAEDRLVELXXXLQALQENQRKGAREAKVIEAKLRSQLSEATEAAEDLRAEVRAERDLHASKLVRLQEELEDLRAGG 516
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: D7G6G4_ECTSI (TMF_TATA_bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G4_ECTSI) HSP 1 Score: 117 bits (292), Expect = 9.650e-25 Identity = 93/278 (33.45%), Postives = 140/278 (50.36%), Query Frame = 1 Query: 307 AKMAALEAAWAERKELRQAVADLTAARDAALQQVRDGRTNAFVDEAGRRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSERAAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASLKEXXXXXXXXXXXXXXXXXXXXERLGALEGEVEGLREEKGRGLRAQRAAESRMRVRVTEAEERAADLQAQLEAERQEAQQKLTAVRAQVSKHRCLG 1140 AK AAL+ +WAE A +DA + + DG E+ +QWQ RE+ L Q QLQ++L R EA RED K D+RRRW++A+ R E+L+AEAHESTAPLLRQV++LQEE+R+RQE + E L++RAA+A+ SL +R +E E+ L+E ++ E+++R+++ EAE+RAA+ +LE ER+EA+ ++++ Q+ R G Sbjct: 907 AKKAALDKSWAETXXXXXXXXXXXAEKDALTKSLEDGGKARQATESQLQQWQDRESTLLLEQSQLQETLERVRREADHREDEAKDRQEDVRRRWKEAVGRAEALQAEAHESTAPLLRQVRSLQEEMRLRQEAVRAAEASLTDRAASAELACREAERRRRVAEAAVAASDEQAHKAEGEVESLGFKLTRLETSYQELKAKCHQHAQRASEVEVELSTLKESSRASALQHKSTEAKLRLQLGEAEDRAAEALRRLEGERREAKDTTSSLKEQLDALRRGG 1184
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: A0A7S2MQN8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQN8_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.150e-18 Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 448 RRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSER 735 RR++ QREALL A+ +Q+QD+L+R HEA LREDAL++EV+DMR+RW+DA R +++ + HEST PL+RQ++ LQ+E R R + TE L +R Sbjct: 8 RREFAQREALLQASLRQIQDTLTRQQHEASLREDALRSEVKDMRKRWQDATQRADAIATDIHESTTPLIRQIQGLQDERRNRTKVWASTEATLEDR 103
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: A0A7S2HQC5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQC5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.510e-17 Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 448 RRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSER 735 RR++ QREALL A+ +Q+QD+L+R HEA LREDAL++EV+DMR+RW+DA R +++ + HEST PL+RQ++ LQ+E R R + TE L +R Sbjct: 8 RREFAQREALLQASLRQIQDTLTRQQHEASLREDALRSEVKDMRKRWQDATQRADAIATDIHESTTPLIRQIQGLQDERRNRTKVWASTEATLEDR 103
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: A0A7R9U5L0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5L0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 7.450e-8 Identity = 70/251 (27.89%), Postives = 128/251 (51.00%), Query Frame = 1 Query: 7 LQAYADEGRALALKQSEMEKMVRRARAEQRQTVDDLAAARRDKAALTERLEKAAETAKAKDAELAXXXXXXXXXXXXXXXXXGKVSTVEMERDRAREEATAKMAALEAAWAERKELRQAVADLTAARDAALQQVRDGRTNAFVDEAGRRQ--WQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAE-AHESTAPLLRQVKALQEELRMRQETAQHTEGLLSERAAAAD 750 L A+ +E +ALA+KQSE+E++ R+AR E R + ++ L ER+ + + + G+++ +E + D A+E+A K A +E E+K L +A L+ + + + + A E GR + W+++E L + ++L+ R E + ++L+ E++ +RRR + A E E+TAPLLRQ++A+++++ R++ TEG L+ERAAAA+ Sbjct: 123 LAAFMEESQALAIKQSELEQITRKARGELRGVQSERDELGKENEILRERIMELEKQLRMMQQSEHQSKKNLSAVQVQSQVTSGRLAQLEDDLDIAKEDAEEKAAIIEEMRQEKKGLAARLATLSEEKQKLARDLEAEKNRAA--EQGRLEGGWREKELFLIRSNEELRRESERRDQEKMEQVNSLQLELQQLRRRAQKAEEEVEGAATTLVQEATAPLLRQIRAMRDDIEAREQAWLQTEGALTERAAAAE 371
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: G4Z577_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z577_PHYSP) HSP 1 Score: 65.1 bits (157), Expect = 9.360e-8 Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 478 LTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMRQETAQHTEGLLSER 735 L T + LQD++ EA RE+ +AE+ D++R+W+DA+AR + L E+T PLLRQ+ ALQE+ R RQET + TE L ER Sbjct: 437 LQQTLEFLQDNVRDLEQEAARREEMARAEIADLKRKWQDAVARVDMLGQSISEATQPLLRQIHALQEDQRARQETWKATESTLLER 522
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Match: A0A7S2VCY3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCY3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.730e-7 Identity = 72/233 (30.90%), Postives = 118/233 (50.64%), Query Frame = 1 Query: 4 MLQAYADEGRALALKQSEMEKMVRRARAEQRQT---VDDLAAARRDKAALTERLEKAAETAKAKDAELAXXXXXXXXXXXXXXXXXGKVSTVEMERDRAREEATAKMAALEAAWAERKELRQAVADLTAARDAALQQVRDGRTNAFVDEAGRRQWQQREALLTATQQQLQDSLSRAMHEAGLREDALKAEVRDMRRRWEDALARGESLRAEAHESTAPLLRQVKALQEELRMR 693 ++ A +EG LA KQ EMEK+VR A+ E R VD+ + A+ + +LE +T KA D A + S +E + ARE+A K ++ A L Q V +L A+ ++++ R A +D R+ ++ + + + L+ L EA +REDAL+ EV ++R+RW+DA+ R +SL + STAPLLRQ+++++ + R R Sbjct: 89 IIAALREEGGKLANKQMEMEKLVRAAKGEARDLRVQVDEESFAKENALEKIAKLEAELKTTKA-DLSAARRGE-------------SQASKLENDLQSAREDAERKAMSILA-------LEQQVKELKASSKELVKELEAARKGAALD--SEREQKKLKKEHNSMLEDLETKLRTTEKEAAVREDALRHEVSELRKRWQDAVRRADSLSMDVQSSTAPLLRQLESMERQNRTR 298 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11969.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11969.1.1 >prot_P-wetherbeei_contig11969.1.1 ID=prot_P-wetherbeei_contig11969.1.1|Name=mRNA_P-wetherbeei_contig11969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=380bp MLQAYADEGRALALKQSEMEKMVRRARAEQRQTVDDLAAARRDKAALTERback to top mRNA from alignment at P-wetherbeei_contig11969:70..1663+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11969.1.1 ID=mRNA_P-wetherbeei_contig11969.1.1|Name=mRNA_P-wetherbeei_contig11969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1594bp|location=Sequence derived from alignment at P-wetherbeei_contig11969:70..1663+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11969:70..1663+ >mRNA_P-wetherbeei_contig11969.1.1 ID=mRNA_P-wetherbeei_contig11969.1.1|Name=mRNA_P-wetherbeei_contig11969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1140bp|location=Sequence derived from alignment at P-wetherbeei_contig11969:70..1663+ (Phaeothamnion wetherbeei SAG_119_79)back to top |