mRNA_P-wetherbeei_contig11956.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A6H5L567_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L567_9PHAE) HSP 1 Score: 140 bits (354), Expect = 9.870e-38 Identity = 65/98 (66.33%), Postives = 79/98 (80.61%), Query Frame = 1 Query: 1 MPMSEGYTMRAPPRRRRDTKDEPVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKSTVATEQEEA 294 MP YTMRA PRRR+D KDEP+FLRKTY+M+++CE A W G+TFVIKDP+ FAN VIPRFFKH+KFSSFVRQLNFYGFRKVKS + + +++ Sbjct: 1 MPADGSYTMRAQPRRRKDVKDEPIFLRKTYEMINTCEDVHAAWTAAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVDGQDS 98
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A835YK43_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK43_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.710e-34 Identity = 64/93 (68.82%), Postives = 75/93 (80.65%), Query Frame = 1 Query: 1 MPMSEG-YTMRAPPRRRRDTK---DEPVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKS 267 MP + G YTMRA PRRR+++ DEPVFLRKTYDM++SC+ +A W G+TFVIKDP+ FA VIP FFKHSKFSSFVRQLNFYGFRKVK+ Sbjct: 1 MPTASGEYTMRAQPRRRKESASRGDEPVFLRKTYDMINSCDQTLAGWSAKGDTFVIKDPDRFAAEVIPTFFKHSKFSSFVRQLNFYGFRKVKA 93
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A836CRK9_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRK9_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.670e-32 Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1 Query: 1 MPMSEGYTMRAPPRRRRDTK-DEPVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKSTV 273 MP YTMRA PRRR++ + DEPVFLRKTY+M+++C+ +A W G+TF+IK PE FA VIP FFKHSKF+SFVRQLNFYGFRKVKS + Sbjct: 1 MPTMGDYTMRAQPRRRKEQQGDEPVFLRKTYEMINTCDTSLASWSARGDTFIIKSPERFAAEVIPTFFKHSKFASFVRQLNFYGFRKVKSAL 92
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: D8LTY4_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY4_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.010e-29 Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 1 MPMSEGYTMRAPPRRRRD-TKDEPVFLRKTYDMVDSCEP----HIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKSTVA 276 MP YT RA PRRR + EP+FLRKT++MV +C ++ACW G TF++K P+AF++VVIP+FFKHSKFSSFVRQLNFYGFRKVKS + Sbjct: 1 MPTCGEYTTRAQPRRRAEMAAQEPIFLRKTFEMVSACSKSDGENLACWSPTGETFIVKHPDAFSSVVIPKFFKHSKFSSFVRQLNFYGFRKVKSNAS 97
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A6H5JT33_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT33_9PHAE) HSP 1 Score: 118 bits (295), Expect = 7.770e-29 Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 1 MPMSEGYTMRAPPRRRRD-TKDEPVFLRKTYDMVDSCEP----HIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKS 267 MP YT RA PRRR + EP+FLRKT++MV +C ++ACW G TF++K P+AF++VVIP+FFKHSKFSSFVRQLNFYGFRKVKS Sbjct: 1 MPTCGEYTTRAQPRRRAEMAAQEPIFLRKTFEMVSACSKSDGENLACWSPTGETFIVKHPDAFSSVVIPKFFKHSKFSSFVRQLNFYGFRKVKS 94
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A7S1XJJ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJJ3_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.400e-28 Identity = 46/69 (66.67%), Postives = 57/69 (82.61%), Query Frame = 1 Query: 61 DEPVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKS 267 ++PVFLRKT+ M+D C P I W R G TF++KDPE FA+ +IP+FF+HS FSSFVRQLNFYGFRK+KS Sbjct: 103 EQPVFLRKTFKMIDQCPPDIGGWSREGTTFLVKDPEIFASKIIPQFFRHSNFSSFVRQLNFYGFRKIKS 171
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A7S2UPP7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPP7_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.100e-28 Identity = 47/74 (63.51%), Postives = 63/74 (85.14%), Query Frame = 1 Query: 46 RRDTKDEPVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKS 267 ++++ + P+FLRKTY M+D+C+P +A W GNTFV+KDPE FA+ +IP+FFKH+ FSSFVRQLNFYGFRK+KS Sbjct: 45 KKESPEAPIFLRKTYHMIDTCDPKVAGWAEDGNTFVVKDPEIFASEIIPQFFKHNNFSSFVRQLNFYGFRKIKS 118
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.470e-27 Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 13 EGYTMRAPPRR-RRDTKDEPVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKS 267 +G ++RA PRR R+D + PVFL+KTY M+DSC P +A W + G+TF++KD EAFAN+ +PRFFKH F SFVRQLNFYGFRK+++ Sbjct: 39 KGASVRAAPRRARKDPNEAPVFLQKTYQMIDSCPPEVAGWSKAGDTFIVKDMEAFANL-LPRFFKHKNFRSFVRQLNFYGFRKLRT 123
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A7S0TDF3_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TDF3_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.050e-27 Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 58 KDE-PVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKS-TVATEQEE 291 KDE PVFL+KTY M+DSC+P IA W G TF++KDPE FA+ +IP+FFKH+ FSSFVRQLNFYGFRK+K+ TV EE Sbjct: 10 KDEIPVFLKKTYHMIDSCDPTIATWSSDGRTFLVKDPEVFASDIIPQFFKHNNFSSFVRQLNFYGFRKIKNDTVRLHDEE 89
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Match: A0A7S1GQW1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQW1_CYCTE) HSP 1 Score: 110 bits (274), Expect = 6.430e-27 Identity = 47/74 (63.51%), Postives = 60/74 (81.08%), Query Frame = 1 Query: 46 RRDTKDEPVFLRKTYDMVDSCEPHIACWGRHGNTFVIKDPEAFANVVIPRFFKHSKFSSFVRQLNFYGFRKVKS 267 ++D ++ P+FLRKTY M+D+C+ IA W G TFV+KDPE FA +IP+FFKH+ FSSFVRQLNFYGFRK+KS Sbjct: 43 KKDAENAPIFLRKTYHMIDTCDTAIATWSEDGTTFVVKDPEKFAAEIIPQFFKHNNFSSFVRQLNFYGFRKIKS 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11956.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11956.1.1 >prot_P-wetherbeei_contig11956.1.1 ID=prot_P-wetherbeei_contig11956.1.1|Name=mRNA_P-wetherbeei_contig11956.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=98bp MPMSEGYTMRAPPRRRRDTKDEPVFLRKTYDMVDSCEPHIACWGRHGNTFback to top mRNA from alignment at P-wetherbeei_contig11956:521..1083- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11956.1.1 ID=mRNA_P-wetherbeei_contig11956.1.1|Name=mRNA_P-wetherbeei_contig11956.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=563bp|location=Sequence derived from alignment at P-wetherbeei_contig11956:521..1083- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11956:521..1083- >mRNA_P-wetherbeei_contig11956.1.1 ID=mRNA_P-wetherbeei_contig11956.1.1|Name=mRNA_P-wetherbeei_contig11956.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig11956:521..1083- (Phaeothamnion wetherbeei SAG_119_79)back to top |