mRNA_P-wetherbeei_contig11935.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11935.3.1
Unique NamemRNA_P-wetherbeei_contig11935.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: D7FLJ8_ECTSI (Acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ8_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 5.440e-9
Identity = 44/87 (50.57%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEA-----VGGLG-FLAGQLGMGKVEMVKDL 243
            L+NL VLPE RR+G+AR L+  AE  AR+  A    LDV   N AAR+LYLS G+EE        GG+G  L   LGMGK  MVK +
Sbjct:  244 LKNLFVLPERRRQGIARELVNGAEVFARQEKARTVCLDVARQNDAARELYLSCGFEEAERPGPIEGGMGGALLRSLGMGKKYMVKGV 330          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: A0A285V8S5_9ACTN (Ribosomal protein S18 acetylase RimI n=1 Tax=Blastococcus aggregatus TaxID=38502 RepID=A0A285V8S5_9ACTN)

HSP 1 Score: 57.4 bits (137), Expect = 2.350e-8
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAVGGLGFLAGQLGMGKVEMVKDL 243
            +Q L V P A+RRG+AR+LL AA E A RRG  +  L VL GN+AAR LY SAG+E E V    FL G   +  V M + L
Sbjct:   78 IQGLAVDPPAQRRGVARQLLDAAAEEAARRGVRKLGLRVLGGNTAARALYESAGFEVEGVLREEFLLGGRYVDDVLMARRL 158          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: A0A4T0V4E6_9NEIS (GNAT family N-acetyltransferase n=2 Tax=Crenobacter intestini TaxID=2563443 RepID=A0A4T0V4E6_9NEIS)

HSP 1 Score: 56.6 bits (135), Expect = 2.780e-8
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAVGGLGFL 198
            L +L V P AR +G+ RRLLAAAE  A RRG  R  L+V   N   R LY SAG+E  A+GG  +L
Sbjct:   58 LHDLSVAPRARGQGVGRRLLAAAEAEAARRGLCRVTLEVRPDNETGRALYASAGFEPAALGGQAYL 123          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: A0A6B2KM18_9NEIS (GNAT family N-acetyltransferase n=2 Tax=Crenobacter sedimenti TaxID=2705474 RepID=A0A6B2KM18_9NEIS)

HSP 1 Score: 56.2 bits (134), Expect = 3.760e-8
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAVGGLGFL 198
            L +L V+P AR +G+ RRLLAA E  A RRG  R  L+V   N+  R LY SAG+E  A+GG  +L
Sbjct:   58 LHDLSVVPRARGQGVGRRLLAAVEAEASRRGLCRVTLEVRPDNATGRALYASAGFEPAALGGQAYL 123          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: UPI001F29C18C (GNAT family N-acetyltransferase n=1 Tax=Streptomyces shenzhenensis TaxID=943815 RepID=UPI001F29C18C)

HSP 1 Score: 56.6 bits (135), Expect = 4.870e-8
Identity = 36/60 (60.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAV 180
            +Q L V  EAR RG+AR LL AA E ARRRGA R RL VL  N+AAR+LY S G+  E V
Sbjct:   82 IQGLAVAEEARGRGVARALLRAAMEEARRRGARRIRLGVLGHNTAARRLYESEGFAVEGV 141          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: K9P8V2_CYAGP (Acetyltransferase n=2 Tax=Cyanobium gracile TaxID=59930 RepID=K9P8V2_CYAGP)

HSP 1 Score: 55.8 bits (133), Expect = 9.760e-8
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAV 180
            L +L V PEARR G+ARRLL AA  H R  GA R  L   + N+AA+ LY SAG+E +AV
Sbjct:   82 LNDLFVRPEARRMGVARRLLEAAVHHCRGAGAIRLSLSTALTNAAAQALYASAGWERDAV 141          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: UPI000DA1F84B (ribosomal protein S18-alanine N-acetyltransferase n=1 Tax=Salinicola peritrichatus TaxID=1267424 RepID=UPI000DA1F84B)

HSP 1 Score: 55.8 bits (133), Expect = 1.010e-7
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGY 165
            LQ++ VLPE+RR+GLAR LLA    HARRRGA +  L+V   N AAR+LY  AG+
Sbjct:   77 LQSISVLPESRRQGLARGLLAWLSHHARRRGAEKLLLEVRESNRAARRLYARAGF 131          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: A0A4D9DCI4_9STRA (N-acetyltransferase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCI4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.580e-7
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAVGGLGFLAGQLGMGKVEMVKDL 243
            L+N++V P+ RR+GLARRLLA  E+HAR  G     L+VL  N AA+ LY   G+E    G L  L   L +GKV M K L
Sbjct:  207 LKNMIVDPDFRRQGLARRLLARTEDHAREVGIKEIHLEVLANNEAAKALYEEQGFEYTR-GPLDSLWRLLKIGKVTMTKRL 286          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: A0A534IFZ2_9EURY (GNAT family N-acetyltransferase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534IFZ2_9EURY)

HSP 1 Score: 54.7 bits (130), Expect = 2.410e-7
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 1
Query:    7 NLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAV 180
            ++ V PEARRRG+ARRLLAAAE+  R +G  + +L+V   N AAR LY + G+ EE +
Sbjct:   93 DVWVAPEARRRGVARRLLAAAEDWCRAQGYRKLKLEVAASNVAARALYTADGFAEERI 150          
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Match: A0A1H5P6Y4_9ACTN (Acetyltransferase (GNAT) family protein n=5 Tax=Streptomyces TaxID=1883 RepID=A0A1H5P6Y4_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 2.660e-7
Identity = 35/60 (58.33%), Postives = 40/60 (66.67%), Query Frame = 1
Query:    1 LQNLMVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAGYEEEAV 180
            +Q L V  EAR RG+AR LL AA E ARRRGA R RL VL  N+ AR+LY S G+  E V
Sbjct:   82 IQGLAVAEEARGRGVARALLRAAMEEARRRGARRIRLGVLGHNAPARRLYESEGFAVEGV 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11935.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLJ8_ECTSI5.440e-950.57Acetyltransferase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A285V8S5_9ACTN2.350e-850.62Ribosomal protein S18 acetylase RimI n=1 Tax=Blast... [more]
A0A4T0V4E6_9NEIS2.780e-851.52GNAT family N-acetyltransferase n=2 Tax=Crenobacte... [more]
A0A6B2KM18_9NEIS3.760e-850.00GNAT family N-acetyltransferase n=2 Tax=Crenobacte... [more]
UPI001F29C18C4.870e-860.00GNAT family N-acetyltransferase n=1 Tax=Streptomyc... [more]
K9P8V2_CYAGP9.760e-855.00Acetyltransferase n=2 Tax=Cyanobium gracile TaxID=... [more]
UPI000DA1F84B1.010e-758.18ribosomal protein S18-alanine N-acetyltransferase ... [more]
A0A4D9DCI4_9STRA1.580e-748.15N-acetyltransferase domain-containing protein n=2 ... [more]
A0A534IFZ2_9EURY2.410e-751.72GNAT family N-acetyltransferase n=1 Tax=Euryarchae... [more]
A0A1H5P6Y4_9ACTN2.660e-758.33Acetyltransferase (GNAT) family protein n=5 Tax=St... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11935contigP-wetherbeei_contig11935:1403..1651 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1123320.KB889596_gene8675
PFAMsAcetyltransf_1
Model size249
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.79e-07
EggNOG OGsCOG0454@1|root,COG0456@2|Bacteria,2IFPH@201174|Actinobacteria
DescriptionAcetyltransferase (GNAT) domain
Cds size237
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185932.22942-CDS-P-wetherbeei_contig11935:1402..16391683185932.22942-CDS-P-wetherbeei_contig11935:1402..1639Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11935 1403..1639 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185932.240057-UTR-P-wetherbeei_contig11935:1639..16511683185932.240057-UTR-P-wetherbeei_contig11935:1639..1651Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11935 1640..1651 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11935.3.1prot_P-wetherbeei_contig11935.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11935 1403..1639 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11935.3.1

>prot_P-wetherbeei_contig11935.3.1 ID=prot_P-wetherbeei_contig11935.3.1|Name=mRNA_P-wetherbeei_contig11935.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
MVLPEARRRGLARRLLAAAEEHARRRGAARCRLDVLVGNSAARQLYLSAG
YEEEAVGGLGFLAGQLGMGKVEMVKDLV*
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mRNA from alignment at P-wetherbeei_contig11935:1403..1651-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11935.3.1 ID=mRNA_P-wetherbeei_contig11935.3.1|Name=mRNA_P-wetherbeei_contig11935.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=249bp|location=Sequence derived from alignment at P-wetherbeei_contig11935:1403..1651- (Phaeothamnion wetherbeei SAG_119_79)
CTCCAAAACCTGATGGTTCTGCCAGAGGCGCGGCGGCGGGGCCTCGCCCG GCGGCTGCTTGCGGCGGCCGAGGAGCACGCTCGCCGACGCGGCGCCGCCC GCTGCCGGCTGGACGTCCTCGTCGGCAACAGCGCGGCGCGGCAGCTCTAT CTGAGCGCCGGATACGAGGAAGAAGCGGTGGGCGGGTTGGGTTTTTTGGC CGGCCAGCTCGGGATGGGTAAAGTGGAGATGGTAAAGGACCTTGTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11935:1403..1651-

>mRNA_P-wetherbeei_contig11935.3.1 ID=mRNA_P-wetherbeei_contig11935.3.1|Name=mRNA_P-wetherbeei_contig11935.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig11935:1403..1651- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTCTGCCAGAGGCGCGGCGGCGGGGCCTCGCCCGGCGGCTGCTTGC
GGCGGCCGAGGAGCACGCTCGCCGACGCGGCGCCGCCCGCTGCCGGCTGG
ACGTCCTCGTCGGCAACAGCGCGGCGCGGCAGCTCTATCTGAGCGCCGGA
TACGAGGAAGAAGCGGTGGGCGGGTTGGGTTTTTTGGCCGGCCAGCTCGG
GATGGGTAAAGTGGAGATGGTAAAGGACCTTGTCTGA
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