mRNA_P-wetherbeei_contig119.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: A0A015IJG7_RHIIW (SWIM-type domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015IJG7_RHIIW) HSP 1 Score: 77.0 bits (188), Expect = 3.650e-11 Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = 1 Query: 85 RTRVVCQVFLRKEDTAAFVW-------AFNNYVKWCCDDGWCPPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKHLRGNPDLLRACRTAFRSAEYAATSEEFESSWGKLTALNLPDGMKTYLSG-LHERREMWACYARSRVLTVGMTATSRVESFFAAFKAMSDR 588 +TR+V Q + E+ A F W A NN P V+ TD + AA++ P T+H LC +HLF+N+K+ LRG D+ F + + + E+F + + ++ A P + YL ++ RE WA Y S++ T G+ +T RVES K + DR Sbjct: 257 KTRIVAQALTKYENQADFNWILQCTLQASNNL----------SPRVLFTDSDLAIIAAVQVVYPQTRHLLCIYHLFENVKKKAKSKLRG--DMALNFVEDFYTMRNSYSEEQFNTKYQEMLAKYEP--CRPYLEKRIYPSRESWAQYFISKIFTAGIESTQRVESINGVIKKLVDR 418
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: UPI001C14A86D (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C14A86D) HSP 1 Score: 74.7 bits (182), Expect = 1.810e-10 Identity = 67/230 (29.13%), Postives = 95/230 (41.30%), Query Frame = 1 Query: 172 CDDGWCPPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKHLRGN-----PDLLRA---CRTAFRSAEYAATSEEFESSWGKLTALNLPDGMKTYLSGLHERREMWACYARSRVLTVGMTATSRVESFFAAFKAMSDRVEKVYGLSGAAQVLTALNLSWAVRAVSDAERAFRESGVRLDDRIAKFFPEVLWWTDTYSTALIQSKTRQQLNACVYYDTELVQ 837 C P V+ TD AAI ET+PSTKH C WHL KNL +K+L+G D ++ CR +F + EEF+ W +L N P+ K L WA R G+ +T RVES+ A K R +Y L Q L L + E+ + V L + I ++F V Y T + R Q+N + Y + ++ Sbjct: 24 CATNGLAPRVLFTDADAGMVAAIHETLPSTKHNYCIWHLRKNL----EKNLKGKLHKKYNDFIKEWNKCRNSF-------SEEEFQKRWHELLT-NYPEAQKYLERALGTDVTGWALCFTHRSFNAGVQSTQRVESYNALIKKSVGRSTTLYELDTQIQ----LQLDKEEKFERLEEQINQNPKVGLPNIIERYFKRVDSIIKKYLTPHVLKMQRHQMNESLLYRVKKIE 237
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: UPI000B8B108A (protein FAR1-RELATED SEQUENCE 5-like n=4 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B108A) HSP 1 Score: 74.3 bits (181), Expect = 1.820e-10 Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 1 Query: 109 FLRKEDTAAFVWAFNNYVKWCCDDGWCPPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKH--LRGNPDLLRACRTAFRSAEYAATSEEFESSWGK-LTALNLPDGMKTYLSGLHERREMWACYARSRVLTVGMTATSRVESFFAAFKAMSDRVEKVYGL 609 F+ E T +F W F ++ G PP I+TD A S AA IR P +H LC+WH+ +N K+H ++ L G D+ +Y T+ EFE W + LT + +L L+ REMW + G+ ++ R E+ K++S R++K GL Sbjct: 294 FVINEKTESFNWLFQTFLT---SMGGNPPITIMTDQAPSIAAGIRNVFPDARHRLCTWHIGENSKKHIGQYRALDGFSDIFNYL------LKYCETAAEFEYHWPRMLTHYKCVEN--PWLKNLYTIREMWCPAYSKNYWSGGVLSSQRCET---TNKSVSHRLDKTQGL 449
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: UPI000B8B2D38 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B2D38) HSP 1 Score: 74.3 bits (181), Expect = 2.780e-10 Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 1 Query: 109 FLRKEDTAAFVWAFNNYVKWCCDDGWCPPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKH--LRGNPDLLRACRTAFRSAEYAATSEEFESSWGK-LTALNLPDGMKTYLSGLHERREMWACYARSRVLTVGMTATSRVESFFAAFKAMSDRVEKVYGL 609 F+ E T +F W F ++ G PP I+TD A S AA IR P +H LC+WH+ +N K+H ++ L G D+ +Y T+ EFE W + LT + +L L+ REMW + G+ ++ R E+ K++S R++K GL Sbjct: 299 FVINEKTESFNWLFQTFLT---SMGGNPPITIMTDQAPSIAAGIRNVFPDARHRLCTWHIGENSKKHIGQYRALDGFSDIFNYL------LKYCETAAEFEYHWPRMLTHYKCVEN--PWLKNLYTIREMWCPAYSKNYWSGGVLSSQRCET---TNKSVSHRLDKTQGL 454
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 3.190e-10 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 1 Query: 190 PPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKHLRGNPDLLRACRTAFRSAEYAATSEEFESSWGKLTALNLPDGMKTYLSG-LHERREMWACYARSRVLTVGMTATSRVESFFAAFK 573 PP VI+TD + +++ E MP TKH SWH+ KNLK + D++R + +A +A + + FE W L + + Y++G L ++R+ WA +T+GMTA+ RVE F+ K Sbjct: 929 PPQVIITDADAAMTSSVAELMPHTKHLYSSWHISKNLKRKCGGEVFA--DVIRR----YTAASFATSMKAFERIWNNLKEVVEGTPCEEYINGYLFDQRKHWARCCHPTTMTLGMTASQRVEGSFSVIK 1051
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: UPI000B76C7C3 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B76C7C3) HSP 1 Score: 73.9 bits (180), Expect = 3.500e-10 Identity = 52/170 (30.59%), Postives = 85/170 (50.00%), Query Frame = 1 Query: 109 FLRKEDTAAFVWAFNNYVKWCCDDGWCPPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKH--LRGNPDLLRACRTAFRSAEYAATSEEFESSWGKL-TALNLPDGMKTYLSGLHERREMWACYARSRVLTVGMTATSRVESFFAAFKAMSDRVEKVYGL 609 F+ E T++F+W F ++++ G P I+TD A S AA IRE P+++H LC+WHL +N K + K L+G DL +Y T+ EFE W ++ N D +L+ L+ +E W + G+ ++ R E+ +++S R+ K GL Sbjct: 285 FVLVEKTSSFIWLFESFMRSM--GGGRHPITIMTDQAPSIAAGIREVFPNSRHRLCTWHLTENSKTNIGKFRVLKGFTDLFDYL------LKYCVTTAEFEHYWPRMMNKYNCNDN--DWLNHLYSIKERWCLAYSKEYFSGGILSSQRSET---TNRSVSHRLRKTDGL 441
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: UPI000B786AC7 (protein FAR1-RELATED SEQUENCE 6-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B786AC7) HSP 1 Score: 72.4 bits (176), Expect = 1.060e-9 Identity = 48/158 (30.38%), Postives = 70/158 (44.30%), Query Frame = 1 Query: 118 KEDTAAFVWAFNNYVKWCCDDGWCPPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKHLRGNPDLLRACRTAFRSAEYAA-TSEEFESSWGKLTALNLPDGMKTYLSGLHERREMWACYARSRVLTVGMTATSRVESFFAAFKAMSDR 588 +ED + W F W G PP ILTD A S A+ +TMPS++H C WH+ + + G D + ++ ++ Y + T+EEFE W + + +L GL + R MW GM T RVES + F A +R Sbjct: 280 REDAETYTWVFRQ---WLASLGNRPPLAILTDQAASMRKALVQTMPSSRHRWCIWHIVRKFGDKL-----GKCDKYKEFKSPLKAIIYESFTAEEFERRWHECIKKYKLE-KNEWLDGLFKERHMWIPAYMREYFWAGMKTTQRVESINSFFDAFVNR 428
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: A0A5J9UJV8_9POAL (Protein FAR1-RELATED SEQUENCE (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UJV8_9POAL) HSP 1 Score: 71.2 bits (173), Expect = 2.360e-9 Identity = 51/151 (33.77%), Postives = 70/151 (46.36%), Query Frame = 1 Query: 106 VFLRKEDTAAFVWAFNNYVKWCCDDGWCPPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKHLRGNPDLLRACRTAFRSAEYAATSE-EFESSWGKLTALNLPDGMKTYLSGLHERREMWACYARSRVLTVGMTATSRVES 555 V L E T +F W+F+ + +G CP ILTD + AA++ TMP T+H C WH+ +N KE L G + F S EFES W + + G Y+ L+ REMWA + + GMT+T R ES Sbjct: 305 VLLTHETTESFEWSFSTFQNIM--NGKCPQ-TILTDQCAAMEAALKTTMPGTRHRWCRWHVLRNAKEK----LGGVYSKFCGFKREFHSLVTDIIDPVEFESKWADIISRYELVG-NPYIERLYTHREMWAKPYFTGIFCGGMTSTQRSES 447
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: UPI000B8A8D13 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8A8D13) HSP 1 Score: 68.6 bits (166), Expect = 5.710e-9 Identity = 47/143 (32.87%), Postives = 71/143 (49.65%), Query Frame = 1 Query: 190 PPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTDKH--LRGNPDLLRACRTAFRSAEYAATSEEFESSWGK-LTALNLPDGMKTYLSGLHERREMWACYARSRVLTVGMTATSRVESFFAAFKAMSDRVEKVYGL 609 PP I+TD A S AA IR P T+H LC+WH+ +N K+H ++ L G D+ +Y T+ EFE W + LT + +L L+ REMW + G+ ++ R E+ K++S R++K GL Sbjct: 5 PPITIMTDQAPSIAAGIRNVFPDTRHRLCTWHIGENSKKHIGQYRALDGFSDIFNYL------LKYCETAAEFEYHWPRMLTHYKCVEN--PWLKNLYTIREMWCPAYSKNYWSGGVLSSQRCET---TNKSVSHRLDKTQGL 136
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Match: UPI000B7963D8 (protein FAR1-RELATED SEQUENCE 7-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B7963D8) HSP 1 Score: 67.8 bits (164), Expect = 3.210e-8 Identity = 52/172 (30.23%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 109 FLRKEDTAAFVWAFNNYVKWCCDDGWC-PPGVILTDDAKSAAAAIRETMPSTKHFLCSWHLFKNLKEHTD--KHLRGNPDLLRACRTAFRSAEYAATSEEFESSWGKLTALNLPDGMKTYLSGLHERREMWACYARSR-VLTVGMTATSRVESFFAAFKAMSDRVEKVYGLS 612 F+ E T++FVW F +++ G C P ++TD A S AAIR+ PS +H LC+WHL +N K + + L+G P++ +Y + EFE W ++ +L+ L++ +E W C A S+ + G+ ++ R E+ ++S+R+ K GLS Sbjct: 243 FVLDEKTSSFVWLFEAFMR---SMGGCRDPITLMTDQAPSIVAAIRQIFPSIRHRLCTWHLGENSKTNIGGLRILKGFPEVFD------NLLKYCESPAEFEHYWPRMMT-KYKCSENDWLNHLYDIKEKW-CPAYSKDYFSGGVLSSQRSET---TNHSVSNRLNKTDGLS 400 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig119.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig119.3.3 >prot_P-wetherbeei_contig119.3.3 ID=prot_P-wetherbeei_contig119.3.3|Name=mRNA_P-wetherbeei_contig119.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=502bp RPSHHLRQHIRHQPIRSAVFRHCLRRRRRTRVVCQVFLRKEDTAAFVWAFback to top mRNA from alignment at P-wetherbeei_contig119:75..2102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig119.3.3 ID=mRNA_P-wetherbeei_contig119.3.3|Name=mRNA_P-wetherbeei_contig119.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2028bp|location=Sequence derived from alignment at P-wetherbeei_contig119:75..2102- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig119:75..2102- >mRNA_P-wetherbeei_contig119.3.3 ID=mRNA_P-wetherbeei_contig119.3.3|Name=mRNA_P-wetherbeei_contig119.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig119:75..2102- (Phaeothamnion wetherbeei SAG_119_79)back to top |