mRNA_P-wetherbeei_contig11895.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: D8LTH4_ECTSI (BolA protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTH4_ECTSI) HSP 1 Score: 146 bits (369), Expect = 8.760e-43 Identity = 73/105 (69.52%), Postives = 84/105 (80.00%), Query Frame = 1 Query: 4 ATPGPMQTLIERKL-QVLEPTYLDVINESHMHSGPASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 A G MQ IE +L + L P +L+VINESHMHSGPA ESHFKV+VVS++FEGK LL RHRMVN L AEE++ +HALSIQ KTP+QWEAEG V PSPPCMGGSK Sbjct: 62 AASGEMQETIEARLSEALSPVHLEVINESHMHSGPAKESHFKVIVVSDEFEGKPLLARHRMVNALFAEEMKGKMHALSIQGKTPAQWEAEGHKVAPSPPCMGGSK 166
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: A0A432WL29_9GAMM (Transcriptional regulator n=2 Tax=Aliidiomarina TaxID=1249554 RepID=A0A432WL29_9GAMM) HSP 1 Score: 122 bits (307), Expect = 3.030e-34 Identity = 64/100 (64.00%), Postives = 78/100 (78.00%), Query Frame = 1 Query: 19 MQTLIERKLQ-VLEPTYLDVINESHMHSGPASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 MQ LIE+KL+ V P YLDV+NESHMHSGPA+ESHFKVV+VS F+G+RLL+RHR VN +LAEEL E IHAL++ + TP +W +G A SP C GGSK Sbjct: 3 MQQLIEQKLERVFTPEYLDVLNESHMHSGPATESHFKVVIVSSGFKGERLLNRHRSVNEVLAEELAEHIHALALHTYTPEEWVEKGNAPL-SPACRGGSK 101
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: A0A831ZLS3_9DELT (BolA/IbaG family iron-sulfur metabolism protein n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A831ZLS3_9DELT) HSP 1 Score: 121 bits (304), Expect = 8.940e-34 Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 19 MQTLIERKL-QVLEPTYLDVINESHMHSGPASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 M IE KL + P +L+VIN+SH H G +++HFKV+VV++ F G+RLL RHR VN LL EEL + +HAL+I++ TP+QW A GGA+ PSPPCMGGSK Sbjct: 3 MHARIEAKLREAFTPAHLEVINQSHHHGGSGTQTHFKVIVVADTFAGERLLSRHRRVNNLLTEELTQGVHALTIEALTPAQWTARGGAIRPSPPCMGGSK 102
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: A0A6L8CLL3_9GAMM (BolA/IbaG family iron-sulfur metabolism protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8CLL3_9GAMM) HSP 1 Score: 121 bits (303), Expect = 1.270e-33 Identity = 58/100 (58.00%), Postives = 79/100 (79.00%), Query Frame = 1 Query: 19 MQTLIERKLQVLEPTYLDVINESHMHSGPA-SESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 + + IE KL L+P +L+V+NESHMHS PA SE+HF+V VVSE+F+G+ LL RHR+VN +L EEL +HAL++ ++TP +W A+GGAV SPPC+GGSK Sbjct: 3 LHSSIEAKLLALDPVHLEVVNESHMHSVPANSETHFRVTVVSERFDGQPLLARHRVVNGMLEEELAAGVHALALHTRTPDEWFAQGGAVPESPPCLGGSK 102
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: UPI001939AEDF (DNA-binding transcriptional regulator BolA-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939AEDF) HSP 1 Score: 119 bits (299), Expect = 9.300e-33 Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 1 Query: 13 GPMQTLIERKL-QVLEPTYLDVINESHMHSGP-ASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 P++T I +KL + P YLDV+NES H+ P SE+HFKVVVVS+ F GKRL+DRHR +N +L++EL ++HALSIQ+KTP QWE G + +PPC+GGSK Sbjct: 21 NPVETSIIKKLTETFNPVYLDVVNESFKHNVPKGSETHFKVVVVSDNFSGKRLIDRHRDINNILSKELEGSVHALSIQAKTPDQWEKSGQTIANTPPCLGGSK 123
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: A0A327WXJ1_9GAMM (BolA protein family transcriptional regulator n=2 Tax=Aliidiomarina maris TaxID=531312 RepID=A0A327WXJ1_9GAMM) HSP 1 Score: 118 bits (296), Expect = 1.520e-32 Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1 Query: 19 MQTLIERKLQVLEPTYLDVINESHMHSGPASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 MQ++IE+KL L PT+L+V NESHMH GPA+ESHFKV +V+EQFEG+RLL RHR VN +LA EL +IHAL++ + TP +W A SP C+GGSK Sbjct: 5 MQSIIEQKLAALAPTFLEVANESHMHGGPATESHFKVTLVTEQFEGERLLARHRKVNQILATELAGSIHALALHTYTPDEWYKRQNAPQ-SPACLGGSK 102
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: UPI0014024C0E (bolA-like protein 1 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014024C0E) HSP 1 Score: 120 bits (300), Expect = 1.570e-32 Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = 1 Query: 13 GPMQTLIERKL-QVLEPTYLDVINESHMHSGP-ASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 GP+Q I KL + L P +LDV+NES MH+ P SE+HFKVVVVS QFEG LL RHR+VN L +EL +HALSIQ++TP QW + GG V PSPPC+GGSK Sbjct: 41 GPVQESIREKLTRALGPVHLDVVNESGMHAVPRGSETHFKVVVVSAQFEGVSLLARHRLVNEALRDELVGCVHALSIQARTPEQWGSSGGRVDPSPPCLGGSK 143
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: A0A1W0ACH0_9STRA (BolA n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACH0_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.570e-32 Identity = 62/107 (57.94%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 1 MATPGPMQTLIERKL-QVLEPTYLDVINESHMHSGP-ASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 MA PGP+ I+ KL P +L+V NES+MH+ P SE+HFKVVVVS++F+GK L+ RHRMVN +L EEL + +HALSIQSKTP QWEA + PSP C GG K Sbjct: 1 MAEPGPVFQAIQSKLASAFAPQHLEVFNESYMHNVPKGSETHFKVVVVSDKFDGKSLIQRHRMVNAVLEEELNQGVHALSIQSKTPVQWEANN-TIRPSPTCQGGMK 106
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: UPI00186481E5 (bolA-like protein 1 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186481E5) HSP 1 Score: 119 bits (298), Expect = 2.660e-32 Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 MATPGPMQTLIERKLQV-LEPTYLDVINESHMHS-GPASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 MA+ P++T + KL LEP +L+VINESHMH+ P SESHF+VVVVS +FEG LL RHR+VN L EEL +IHAL+IQ+KTP QWE ++ SPPCMGGSK Sbjct: 29 MASDRPVETTVRAKLTAALEPAHLEVINESHMHAVPPGSESHFRVVVVSSRFEGLSLLQRHRLVNETLREELSNSIHALAIQAKTPEQWE-NNPSLAKSPPCMGGSK 134
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Match: A0A6L7MF51_9PROT (BolA/IbaG family iron-sulfur metabolism protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L7MF51_9PROT) HSP 1 Score: 117 bits (292), Expect = 6.170e-32 Identity = 58/101 (57.43%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 19 MQTLIERKLQ-VLEPTYLDVINESHMHS-GPASESHFKVVVVSEQFEGKRLLDRHRMVNTLLAEELREAIHALSIQSKTPSQWEAEGGAVTPSPPCMGGSK 315 +QT IE K+Q L+P +L+V NESHMH+ P SESHFKV VVS +F+GK + RHR++N LLAEEL +HALS+ + TP +W+A+ G + SPPCMGGSK Sbjct: 3 IQTSIEHKIQGALQPVFLEVANESHMHNVAPGSESHFKVTVVSREFDGKLPVARHRILNRLLAEELAGTVHALSLHTYTPEEWQAKNGEIRKSPPCMGGSK 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11895.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11895.2.1 >prot_P-wetherbeei_contig11895.2.1 ID=prot_P-wetherbeei_contig11895.2.1|Name=mRNA_P-wetherbeei_contig11895.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp MATPGPMQTLIERKLQVLEPTYLDVINESHMHSGPASESHFKVVVVSEQFback to top mRNA from alignment at P-wetherbeei_contig11895:1029..1633+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11895.2.1 ID=mRNA_P-wetherbeei_contig11895.2.1|Name=mRNA_P-wetherbeei_contig11895.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=605bp|location=Sequence derived from alignment at P-wetherbeei_contig11895:1029..1633+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11895:1029..1633+ >mRNA_P-wetherbeei_contig11895.2.1 ID=mRNA_P-wetherbeei_contig11895.2.1|Name=mRNA_P-wetherbeei_contig11895.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig11895:1029..1633+ (Phaeothamnion wetherbeei SAG_119_79)back to top |